RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 IQSEC1Q6DN90 963 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 TMTC2Q8N394 836 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 PCSK9Q8NBP7 692 aaKnown RBP19.36■□□□□ 0.69
PKP3-209ENST00000533069 NUP133Q8WUM0 1156 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 FERMT2Q96AC1 680 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 MAP3K14Q99558 947 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 GDF15Q99988 308 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 LY9Q9HBG7 655 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 SENP2Q9HC62 589 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 ATP11BQ9Y2G3 1177 aa19.36■□□□□ 0.69
PKP3-209ENST00000533069 BMP8BP34820 402 aa19.35■□□□□ 0.69
PKP3-209ENST00000533069 CCSAPQ6IQ19 270 aaPredicted RBP19.35■□□□□ 0.69
PKP3-209ENST00000533069 TAPT1Q6NXT6 567 aa19.35■□□□□ 0.69
PKP3-209ENST00000533069 NOL8Q76FK4 1167 aaKnown RBP19.35■□□□□ 0.69
PKP3-209ENST00000533069 FBXO16Q8IX29 292 aaPredicted RBP19.35■□□□□ 0.69
PKP3-209ENST00000533069 RIOX1Q9H6W3 641 aa19.35■□□□□ 0.69
PKP3-209ENST00000533069 PRKAG2Q9UGJ0 569 aa19.35■□□□□ 0.69
PKP3-209ENST00000533069 SH2B2O14492 632 aaPredicted RBP19.34■□□□□ 0.69
PKP3-209ENST00000533069 EDNRBP24530 442 aa19.34■□□□□ 0.69
PKP3-209ENST00000533069 KIF5BP33176 963 aa19.34■□□□□ 0.69
PKP3-209ENST00000533069 LIFRP42702 1097 aa19.34■□□□□ 0.69
PKP3-209ENST00000533069 PDE4DQ08499 809 aa19.34■□□□□ 0.69
PKP3-209ENST00000533069 KCNA10Q16322 511 aa19.34■□□□□ 0.69
PKP3-209ENST00000533069 TRIM60Q495X7 471 aa19.34■□□□□ 0.69
PKP3-209ENST00000533069 EEPD1Q7L9B9 569 aa19.34■□□□□ 0.69
PKP3-209ENST00000533069 TLK2Q86UE8 772 aa19.34■□□□□ 0.69
PKP3-209ENST00000533069 ZNF654Q8IZM8 581 aa19.34■□□□□ 0.69
PKP3-209ENST00000533069 CTCFLQ8NI51 663 aaPredicted RBP19.34■□□□□ 0.69
PKP3-209ENST00000533069 GNEQ9Y223 722 aaKnown RBP19.34■□□□□ 0.69
PKP3-209ENST00000533069 Q9Y3F1 56 aa19.34■□□□□ 0.69
PKP3-209ENST00000533069 DDX49Q9Y6V7 483 aaKnown RBP19.34■□□□□ 0.69
PKP3-209ENST00000533069 LRRC37A2A6NM11 1700 aa19.34■□□□□ 0.69
PKP3-209ENST00000533069 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.33■□□□□ 0.68
PKP3-209ENST00000533069 MYADML2A6NDP7 307 aa19.33■□□□□ 0.68
PKP3-209ENST00000533069 SLC34A2O95436 690 aa19.33■□□□□ 0.68
PKP3-209ENST00000533069 SMPD1P17405 629 aa19.33■□□□□ 0.68
PKP3-209ENST00000533069 MAGEA10P43363 369 aaPredicted RBP19.33■□□□□ 0.68
PKP3-209ENST00000533069 GNASQ5JWF2 1037 aa19.33■□□□□ 0.68
PKP3-209ENST00000533069 NFXL1Q6ZNB6 911 aa19.33■□□□□ 0.68
PKP3-209ENST00000533069 SYTL5Q8TDW5 730 aaPredicted RBP19.33■□□□□ 0.68
PKP3-209ENST00000533069 GLT1D1Q96MS3 346 aa19.33■□□□□ 0.68
PKP3-209ENST00000533069 AP5M1Q9H0R1 490 aa19.33■□□□□ 0.68
PKP3-209ENST00000533069 STARD7Q9NQZ5 370 aa19.33■□□□□ 0.68
PKP3-209ENST00000533069 ELP1O95163 1332 aa19.32■□□□□ 0.68
PKP3-209ENST00000533069 RBM47A0AV96 593 aaKnown RBP19.32■□□□□ 0.68
PKP3-209ENST00000533069 CCDC69A6NI79 296 aa19.32■□□□□ 0.68
PKP3-209ENST00000533069 GHRHRQ02643 423 aa19.32■□□□□ 0.68
PKP3-209ENST00000533069 KRT32Q14532 448 aa19.32■□□□□ 0.68
PKP3-209ENST00000533069 TSGA10IPQ3SY00 556 aa19.32■□□□□ 0.68
PKP3-209ENST00000533069 DUSP28Q4G0W2 176 aa19.32■□□□□ 0.68
PKP3-209ENST00000533069 HOMER1Q86YM7 354 aa19.32■□□□□ 0.68
PKP3-209ENST00000533069 SAMD3Q8N6K7 520 aa19.32■□□□□ 0.68
PKP3-209ENST00000533069 NSUN6Q8TEA1 469 aaKnown RBP19.32■□□□□ 0.68
PKP3-209ENST00000533069 LZTS2Q9BRK4 669 aa19.32■□□□□ 0.68
PKP3-209ENST00000533069 PDGFCQ9NRA1 345 aa19.32■□□□□ 0.68
PKP3-209ENST00000533069 MAP3K20Q9NYL2 800 aaKnown RBP19.32■□□□□ 0.68
PKP3-209ENST00000533069 PCDHA1Q9Y5I3 950 aa19.32■□□□□ 0.68
PKP3-209ENST00000533069 CTAGE5O15320 804 aa19.31■□□□□ 0.68
PKP3-209ENST00000533069 PPP1R11O60927 126 aaPredicted RBP19.31■□□□□ 0.68
PKP3-209ENST00000533069 ASGR1P07306 291 aa19.31■□□□□ 0.68
PKP3-209ENST00000533069 CALM1P0DP23 149 aa19.31■□□□□ 0.68
PKP3-209ENST00000533069 CALM2P0DP24 149 aa19.31■□□□□ 0.68
PKP3-209ENST00000533069 CALM3P0DP25 149 aa19.31■□□□□ 0.68
PKP3-209ENST00000533069 SMARCA1P28370 1054 aa19.31■□□□□ 0.68
PKP3-209ENST00000533069 GNAQP50148 359 aa19.31■□□□□ 0.68
PKP3-209ENST00000533069 SLC35G1Q2M3R5 365 aa19.31■□□□□ 0.68
PKP3-209ENST00000533069 NEK1Q96PY6 1258 aa19.31■□□□□ 0.68
PKP3-209ENST00000533069 PIGSQ96S52 555 aa19.31■□□□□ 0.68
PKP3-209ENST00000533069 SPZ1Q9BXG8 430 aa19.31■□□□□ 0.68
PKP3-209ENST00000533069 GPHNQ9NQX3 736 aaPredicted RBP19.31■□□□□ 0.68
PKP3-209ENST00000533069 DNAH12Q6ZR08 3092 aa19.31■□□□□ 0.68
PKP3-209ENST00000533069 RANBP2P49792 3224 aaKnown RBP19.31■□□□□ 0.68
PKP3-209ENST00000533069 LCTP09848 1927 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 PNMA6FA0A0J9YX94 578 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 CYTH3O43739 400 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 ZEB2O60315 1214 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 CABYRO75952 493 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 FXR1P51114 621 aaKnown RBP eCLIP19.3■□□□□ 0.68
PKP3-209ENST00000533069 HSD17B4P51659 736 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 TLE2Q04725 743 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 FSCN1Q16658 493 aaKnown RBP19.3■□□□□ 0.68
PKP3-209ENST00000533069 SGMS1Q86VZ5 419 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 SCFD2Q8WU76 684 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 TBC1D5Q92609 795 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 TOX2Q96NM4 488 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 IWS1Q96ST2 819 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 RMDN3Q96TC7 470 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 LBHD1Q9BQE6 289 aaPredicted RBP19.3■□□□□ 0.68
PKP3-209ENST00000533069 WDR11Q9BZH6 1224 aa19.3■□□□□ 0.68
PKP3-209ENST00000533069 MROH7Q68CQ1 1323 aa19.29■□□□□ 0.68
PKP3-209ENST00000533069 NKRFO15226 690 aaKnown RBP eCLIP19.29■□□□□ 0.68
PKP3-209ENST00000533069 DYNC1LI2O43237 492 aaPredicted RBP19.29■□□□□ 0.68
PKP3-209ENST00000533069 CFBP00751 764 aa19.29■□□□□ 0.68
PKP3-209ENST00000533069 PPP2R5BQ15173 497 aa19.29■□□□□ 0.68
PKP3-209ENST00000533069 ANKRD33Q7Z3H0 272 aa19.29■□□□□ 0.68
PKP3-209ENST00000533069 TAAR1Q96RJ0 339 aa19.29■□□□□ 0.68
PKP3-209ENST00000533069 MYL10Q9BUA6 226 aa19.29■□□□□ 0.68
PKP3-209ENST00000533069 UBE2OQ9C0C9 1292 aaKnown RBP19.29■□□□□ 0.68
PKP3-209ENST00000533069 PRDM5Q9NQX1 630 aaPredicted RBP19.29■□□□□ 0.68
PKP3-209ENST00000533069 PDLIM7Q9NR12 457 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms