RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 ELP1O95163 1332 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 SHROOM3Q8TF72 1996 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 NBL1P41271 181 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 GCLCP48506 637 aaPredicted RBP2.23□□□□□ -2.05
KNL1-211ENST00000533001 MGAT3Q09327 533 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 NECAB2Q7Z6G3 386 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 P2RY11Q96G91 374 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 XAGE2Q96GT9 111 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 NUP210Q8TEM1 1887 aaPredicted RBP2.23□□□□□ -2.05
KNL1-211ENST00000533001 SEMA3EO15041 775 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 SMPD1P17405 629 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 PURAQ00577 322 aaKnown RBP2.23□□□□□ -2.05
KNL1-211ENST00000533001 FUT2Q10981 343 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 NRBP1Q9UHY1 535 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 AKAP6Q13023 2319 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 ERVK-21P61565 698 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 SEPT2Q15019 361 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 NPY5RQ15761 445 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 TBC1D22AQ8WUA7 517 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 TRPV6Q9H1D0 765 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 ZBTB40Q9NUA8 1239 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 CACNA2D2Q9NY47 1150 aa2.23□□□□□ -2.05
KNL1-211ENST00000533001 MBLAC1A4D2B0 266 aaPredicted RBP2.22□□□□□ -2.05
KNL1-211ENST00000533001 IGSF3O75054 1194 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 GH2P01242 217 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 PGK2P07205 417 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 ATF7P17544 494 aaPredicted RBP2.22□□□□□ -2.05
KNL1-211ENST00000533001 ERCC3P19447 782 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 CYP2C18P33260 490 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 ADCYAP1R1P41586 468 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 ZAP70P43403 619 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 AFF1P51825 1210 aaKnown RBP2.22□□□□□ -2.05
KNL1-211ENST00000533001 ANO1Q5XXA6 986 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 PCSK4Q6UW60 755 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 RIOX2Q8IUF8 465 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 SMRP1Q8NCR6 262 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 OSBP2Q969R2 916 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 AGO3Q9H9G7 860 aaKnown RBP2.22□□□□□ -2.05
KNL1-211ENST00000533001 HMX1Q9NP08 348 aaPredicted RBP2.22□□□□□ -2.05
KNL1-211ENST00000533001 PPP1R9AQ9ULJ8 1098 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 TMEM131Q92545 1883 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 PRR33A8MZF0 331 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 ASGR1P07306 291 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 BTDP43251 543 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 ARHGAP1Q07960 439 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 TFCP2Q12800 502 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 SMAD2Q15796 467 aaKnown RBP2.22□□□□□ -2.05
KNL1-211ENST00000533001 CD300LGQ6UXG3 332 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 GSTCDQ8NEC7 633 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 ARHGAP45Q92619 1136 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 GPKOWQ92917 476 aaPredicted RBP eCLIP2.22□□□□□ -2.054e-7■■□□□ 14.1
KNL1-211ENST00000533001 PCYT2Q99447 389 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 PUS7LQ9H0K6 701 aaKnown RBP2.22□□□□□ -2.05
KNL1-211ENST00000533001 GJB5O95377 273 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 CA3P07451 260 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 CYP2B6P20813 491 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 RABGGTBP53611 331 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 IFIT5Q13325 482 aaKnown RBP2.22□□□□□ -2.05
KNL1-211ENST00000533001 C16orf86Q6ZW13 317 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 LCORLQ8N3X6 602 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 OGFOD1Q8N543 542 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 STRBPQ96SI9 672 aaKnown RBP2.22□□□□□ -2.05
KNL1-211ENST00000533001 TINF2Q9BSI4 451 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 PCDHGC5Q9Y5F6 944 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 FRAS1Q86XX4 4008 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 TENM3Q9P273 2699 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 ZEB2O60315 1214 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 DUSP11O75319 330 aaKnown RBP2.22□□□□□ -2.05
KNL1-211ENST00000533001 F2P00734 622 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 ATP4AP20648 1035 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 LEXMQ3ZCV2 418 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 TMEM173Q86WV6 379 aaPredicted RBP2.22□□□□□ -2.05
KNL1-211ENST00000533001 TMEM40Q8WWA1 233 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 TBC1D2Q9BYX2 928 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 ALDH8A1Q9H2A2 487 aaPredicted RBP2.22□□□□□ -2.05
KNL1-211ENST00000533001 TMX1Q9H3N1 280 aa2.22□□□□□ -2.05
KNL1-211ENST00000533001 TAF4O00268 1085 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 ARNTLO00327 626 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 PI15O43692 258 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 PLA2G6O60733 806 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 GAS6Q14393 721 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 KCNA10Q16322 511 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 MUM1L1Q5H9M0 696 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 C20orf194Q5TEA3 1177 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 CCDC30Q5VVM6 783 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 RPAINQ86UA6 219 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 TMEM105Q8N8V8 129 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 IL31RAQ8NI17 732 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 PARK7Q99497 189 aaKnown RBP2.21□□□□□ -2.05
KNL1-211ENST00000533001 USP40Q9NVE5 1235 aa2.21□□□□□ -2.05
KNL1-211ENST00000533001 LRRFIP2Q9Y608 721 aaKnown RBP2.21□□□□□ -2.05
KNL1-211ENST00000533001 SDK2Q58EX2 2172 aa2.21□□□□□ -2.06
KNL1-211ENST00000533001 SEC16AO15027 2179 aa2.21□□□□□ -2.06
KNL1-211ENST00000533001 BCAR3O75815 825 aa2.21□□□□□ -2.06
KNL1-211ENST00000533001 PRR29P0C7W0 189 aa2.21□□□□□ -2.06
KNL1-211ENST00000533001 MRPS9P82933 396 aaKnown RBP2.21□□□□□ -2.06
KNL1-211ENST00000533001 TYW1BQ6NUM6 668 aa2.21□□□□□ -2.06
KNL1-211ENST00000533001 CTR9Q6PD62 1173 aa2.21□□□□□ -2.06
KNL1-211ENST00000533001 NBPF11Q86T75 865 aa2.21□□□□□ -2.06
KNL1-211ENST00000533001 EMID1Q96A84 441 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms