RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CAPN9O14815 690 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 TMEM191BP0C7N4 346 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 SND1Q7KZF4 910 aaKnown RBP eCLIP16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 BRD1O95696 1058 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 LRCH2Q5VUJ6 765 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 GJD4Q96KN9 370 aaPredicted RBP16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 FAM196BA6NMK8 535 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 FMNL1O95466 1100 aaPredicted RBP16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 STAT2P52630 851 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 SLC12A2P55011 1212 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 EXOC8Q8IYI6 725 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 CCDC89Q8N998 374 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 PCDHA7Q9UN72 937 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 PCDHA4Q9UN74 947 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 MNAT1P51948 309 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 AP5M1Q9H0R1 490 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 PPANQ9NQ55 473 aaKnown RBP16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 KCNJ18B7U540 433 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 KCNJ12Q14500 433 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 DAAM2Q86T65 1068 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 ZSWIM5Q9P217 1185 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 E9PCH4 1651 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 ECE2O60344 883 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 SARNPP82979 210 aaKnown RBP16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 HADHQ16836 314 aaKnown RBP16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 APOA5Q6Q788 366 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 CCDC105Q8IYK2 499 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 DHX36Q9H2U1 1008 aaKnown RBP16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 ABCA6Q8N139 1617 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 POLR2BP30876 1174 aaKnown RBP16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 HOXA13P31271 388 aaPredicted RBP16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 CFAP221Q4G0U5 840 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 RUFY4Q6ZNE9 571 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 KANSL2Q9H9L4 492 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 TMEM63CQ9P1W3 806 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 A6NNZ2 444 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 H7C1W4 665 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 TUBB8Q3ZCM7 444 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 CASC4Q6P4E1 433 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 CELF1Q92879 486 aaKnown RBP16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 ERO1AQ96HE7 468 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 VPS18Q9P253 973 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 AKT3Q9Y243 479 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 IGKV5-2P06315 115 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 CYP19A1P11511 503 aaPredicted RBP16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 CDK8P49336 464 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 SYDE2Q5VT97 1194 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 RPS6KC1Q96S38 1066 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 AFG3L2Q9Y4W6 797 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 CARMIL3Q8ND23 1372 aa16.23■□□□□ 0.19
PCDHA9-202ENST00000532602 BMP3P12645 472 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 CCDC127Q96BQ5 260 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 CDHR1Q96JP9 859 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 MAGEF1Q9HAY2 307 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 RPN1P04843 607 aaKnown RBP16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 ABI1Q8IZP0 508 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 HAUS1Q96CS2 278 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 ZNF341Q9BYN7 854 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 ABCB4P21439 1286 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 CRKP46108 304 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 GBP6Q6ZN66 633 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 TRIML1Q8N9V2 468 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 PI4KBQ9UBF8 816 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 NARFQ9UHQ1 456 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 MINPP1Q9UNW1 487 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 RABGAP1Q9Y3P9 1069 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 TRIM50Q86XT4 487 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 U2AF1L4Q8WU68 220 aaKnown RBP16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 PRPF31Q8WWY3 499 aaKnown RBP16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 UNC13BO14795 1591 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 ARMCX5Q6P1M9 558 aa16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 FTOQ9C0B1 505 aaKnown RBP eCLIP16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 TDRD3Q9H7E2 651 aaKnown RBP16.22■□□□□ 0.19
PCDHA9-202ENST00000532602 CIB2O75838 187 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 ZWINTO95229 277 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 OATP04181 439 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 KLHL7Q8IXQ5 586 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 XPO4Q9C0E2 1151 aaKnown RBP16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 COA1Q9GZY4 146 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 PARP2Q9UGN5 583 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 ARHGAP31Q2M1Z3 1444 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 hCG_1984214I3L0E3 225 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 VIMP08670 466 aaKnown RBP16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 ZNF713Q8N859 430 aaPredicted RBP16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 TBCKQ8TEA7 893 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 IFIH1Q9BYX4 1025 aaKnown RBP16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 RIOK3O14730 519 aaKnown RBP16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 PAK2Q13177 524 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 LAD1O00515 517 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 PRDX5P30044 214 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 LONP1P36776 959 aaKnown RBP16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 PPP2R5EQ16537 467 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 PTPN21Q16825 1174 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 PPFIBP2Q8ND30 876 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 ATP2A3Q93084 1043 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 AMFRQ9UKV5 643 aa16.21■□□□□ 0.19
PCDHA9-202ENST00000532602 NUB1Q9Y5A7 615 aa16.21■□□□□ 0.18
PCDHA9-202ENST00000532602 TULP4Q9NRJ4 1543 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms