RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PFKFB3Q16875 520 aaPredicted RBP16.89■□□□□ 0.3
PCDHA3-202ENST00000532566 TBC1D9BQ66K14 1250 aa16.89■□□□□ 0.3
PCDHA3-202ENST00000532566 CPLX4Q7Z7G2 160 aa16.89■□□□□ 0.3
PCDHA3-202ENST00000532566 SLC35F6Q8N357 371 aa16.89■□□□□ 0.3
PCDHA3-202ENST00000532566 FNBP4Q8N3X1 1017 aaPredicted RBP16.89■□□□□ 0.3
PCDHA3-202ENST00000532566 GOLGA5Q8TBA6 731 aa16.89■□□□□ 0.3
PCDHA3-202ENST00000532566 SH3RF3Q8TEJ3 882 aaPredicted RBP16.89■□□□□ 0.3
PCDHA3-202ENST00000532566 CSRNP1Q96S65 589 aa16.89■□□□□ 0.3
PCDHA3-202ENST00000532566 RIC8AQ9NPQ8 531 aa16.89■□□□□ 0.3
PCDHA3-202ENST00000532566 DISC1Q9NRI5 854 aa16.89■□□□□ 0.3
PCDHA3-202ENST00000532566 PLCG1P19174 1290 aa16.89■□□□□ 0.29
PCDHA3-202ENST00000532566 FKBP3Q00688 224 aaKnown RBP16.89■□□□□ 0.29
PCDHA3-202ENST00000532566 ARID5BQ14865 1188 aa16.89■□□□□ 0.29
PCDHA3-202ENST00000532566 GPR101Q96P66 508 aaPredicted RBP16.89■□□□□ 0.29
PCDHA3-202ENST00000532566 DDIT3P35638 169 aa16.89■□□□□ 0.29
PCDHA3-202ENST00000532566 BPIFA3Q9BQP9 254 aa16.89■□□□□ 0.29
PCDHA3-202ENST00000532566 PLCD4Q9BRC7 762 aa16.89■□□□□ 0.29
PCDHA3-202ENST00000532566 COA1Q9GZY4 146 aa16.89■□□□□ 0.29
PCDHA3-202ENST00000532566 CC2D2BQ6DHV5 1058 aa16.89■□□□□ 0.29
PCDHA3-202ENST00000532566 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
PCDHA3-202ENST00000532566 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.29
PCDHA3-202ENST00000532566 MAN2A1Q16706 1144 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 DAAM2Q86T65 1068 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 U2AF1L4Q8WU68 220 aaKnown RBP16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 PAIP2Q9BPZ3 127 aaKnown RBP16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 TAF6LQ9Y6J9 622 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 PABPC4Q13310 644 aaKnown RBP eCLIP16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 LIN9Q5TKA1 542 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 SRGAP1Q7Z6B7 1085 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 ANKS4BQ8N8V4 417 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 KAZALD1Q96I82 304 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 TRIM31Q9BZY9 425 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 SPICE1Q8N0Z3 855 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 OTUD6BQ8N6M0 293 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 FAM84BQ96KN1 310 aaPredicted RBP16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 TEKT3Q9BXF9 490 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
PCDHA3-202ENST00000532566 ZNF34Q8IZ26 560 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 GJA10Q969M2 543 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 TMEM47Q9BQJ4 181 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 IQCGQ9H095 443 aaKnown RBP16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 ZNF512BQ96KM6 892 aaPredicted RBP16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 SALL3Q9BXA9 1300 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 KIF28PB7ZC32 967 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 PPFIA1Q13136 1202 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 PANX2Q96RD6 677 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 CD209Q9NNX6 404 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 PI4KBQ9UBF8 816 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 CLEC11AQ9Y240 323 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 TESPA1A2RU30 521 aaPredicted RBP16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 A6NNZ2 444 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 KCNQ2O43526 872 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 HPDP32754 393 aaPredicted RBP16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 TUBB8Q3ZCM7 444 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 OTUD6AQ7L8S5 288 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 ANKRD13CQ8N6S4 541 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 GDAP1L1Q96MZ0 367 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 AMFRQ9UKV5 643 aa16.87■□□□□ 0.29
PCDHA3-202ENST00000532566 H2AFZP0C0S5 128 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 NR2F2P24468 414 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 KMT5BQ4FZB7 885 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 H2AFVQ71UI9 128 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 MCF2L2Q86YR7 1114 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 SEPT12Q8IYM1 358 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 THAP9Q9H5L6 903 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 BUB1O43683 1085 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 TRPC3Q13507 836 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 LRRC41Q15345 812 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 CLUL1Q15846 466 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 EXOC3L4Q17RC7 722 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 RUFY4Q6ZNE9 571 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 CCDC121Q6ZUS5 278 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 KRT27Q7Z3Y8 459 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 PLEKHG2Q9H7P9 1386 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 NOP56O00567 594 aaKnown RBP16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 NMT2O60551 498 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 BMP3P12645 472 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 LRCH2Q5VUJ6 765 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 SOWAHDA6NJG2 315 aa16.86■□□□□ 0.29
PCDHA3-202ENST00000532566 K7ENM7 598 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 GDF11O95390 407 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 BAG6P46379 1132 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 KRT31Q15323 416 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 SHC4Q6S5L8 630 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 ZNF365Q70YC5 407 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 GIMAP7Q8NHV1 300 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 DDX41Q9UJV9 622 aaKnown RBP16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 PNMA2Q9UL42 364 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 PNMA6FA0A0J9YX94 578 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 ABCB4P21439 1286 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 ZBED6P86452 979 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 GNPTABQ3T906 1256 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 OSBPL5Q9H0X9 879 aaPredicted RBP16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 FAM184BQ9ULE4 1060 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 CCPG1Q9ULG6 757 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 CLRN2A0PK11 232 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 NDUFAB1O14561 156 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 KCNK3O14649 394 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms