RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 RAVER2Q9HCJ3 691 aaKnown RBP25.06■■□□□ 1.6
PACSIN3-209ENST00000532457 SLC45A1Q9Y2W3 748 aa25.06■■□□□ 1.6
PACSIN3-209ENST00000532457 LOC285556D6RIA3 1793 aa25.06■■□□□ 1.6
PACSIN3-209ENST00000532457 BTBD19C9JJ37 291 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 ALDH1A1P00352 501 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 ICAM1P05362 532 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 TRAPPC10P48553 1259 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 COG2Q14746 738 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 NONOQ15233 471 aaKnown RBP eCLIP25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 IFNL1Q8IU54 200 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 CPXCR1Q8N123 301 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 TBCKQ8TEA7 893 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 CLIC6Q96NY7 704 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 PPP6R2O75170 966 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 HOXA7P31268 230 aaPredicted RBP25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 GRIN1Q05586 938 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 CAVIN1Q6NZI2 390 aaKnown RBP25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 C4orf32Q8N8J7 132 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 REPS2Q8NFH8 660 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 PTPN18Q99952 460 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 TMEM63CQ9P1W3 806 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 PNMA3Q9UL41 463 aa25.05■■□□□ 1.6
PACSIN3-209ENST00000532457 MBD3O95983 291 aa25.04■■□□□ 1.6
PACSIN3-209ENST00000532457 MCM7P33993 719 aa25.04■■□□□ 1.6
PACSIN3-209ENST00000532457 ADALQ6DHV7 355 aa25.04■■□□□ 1.6
PACSIN3-209ENST00000532457 GPAT2Q6NUI2 795 aa25.04■■□□□ 1.6
PACSIN3-209ENST00000532457 GOLPH3LQ9H4A5 285 aa25.04■■□□□ 1.6
PACSIN3-209ENST00000532457 PDHXO00330 501 aa25.03■■□□□ 1.6
PACSIN3-209ENST00000532457 OSBPP22059 807 aa25.03■■□□□ 1.6
PACSIN3-209ENST00000532457 HOXA13P31271 388 aaPredicted RBP25.03■■□□□ 1.6
PACSIN3-209ENST00000532457 CCPG1Q9ULG6 757 aa25.03■■□□□ 1.6
PACSIN3-209ENST00000532457 GOLGA6L4A6NEF3 574 aa25.02■■□□□ 1.6
PACSIN3-209ENST00000532457 IGF2BP3O00425 579 aaKnown RBP eCLIP25.02■■□□□ 1.6
PACSIN3-209ENST00000532457 MAP2K1Q02750 393 aaPredicted RBP25.02■■□□□ 1.6
PACSIN3-209ENST00000532457 PTGDRQ13258 359 aa25.02■■□□□ 1.6
PACSIN3-209ENST00000532457 CCAR1Q8IX12 1150 aaKnown RBP25.02■■□□□ 1.6
PACSIN3-209ENST00000532457 FAM43AQ8N2R8 423 aa25.02■■□□□ 1.6
PACSIN3-209ENST00000532457 CLEC4DQ8WXI8 215 aa25.02■■□□□ 1.6
PACSIN3-209ENST00000532457 FBXO2Q9UK22 296 aaPredicted RBP25.02■■□□□ 1.6
PACSIN3-209ENST00000532457 THSD7BQ9C0I4 1608 aa25.02■■□□□ 1.6
PACSIN3-209ENST00000532457 ZBED4O75132 1171 aa25.02■■□□□ 1.6
PACSIN3-209ENST00000532457 IRX3P78415 501 aaPredicted RBP25.02■■□□□ 1.6
PACSIN3-209ENST00000532457 GLT8D2Q9H1C3 349 aa25.02■■□□□ 1.6
PACSIN3-209ENST00000532457 SPDYE16A6NNV3 312 aaPredicted RBP25.01■■□□□ 1.59
PACSIN3-209ENST00000532457 MRPL11Q9Y3B7 192 aaKnown RBP25.01■■□□□ 1.59
PACSIN3-209ENST00000532457 RIPK3Q9Y572 518 aa25.01■■□□□ 1.59
PACSIN3-209ENST00000532457 PEX10O60683 326 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 PTPREP23469 700 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 TMEM132BQ14DG7 1078 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 IL17AQ16552 155 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 LETM2Q2VYF4 491 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 MUM1L1Q5H9M0 696 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 NEK8Q86SG6 692 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 TMEM60Q9H2L4 133 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 HOXC10Q9NYD6 342 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 ABCB11O95342 1321 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 A0A1W2PQ27 194 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 A0A1W2PQ64 194 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 A0A1W2PQD8 194 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 PIK3CDO00329 1044 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 ATP2C1P98194 919 aaPredicted RBP25■■□□□ 1.59
PACSIN3-209ENST00000532457 TRAF1Q13077 416 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 SHC4Q6S5L8 630 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 PARK7Q99497 189 aaKnown RBP25■■□□□ 1.59
PACSIN3-209ENST00000532457 BEGAINQ9BUH8 593 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 CEP131Q9UPN4 1083 aa25■■□□□ 1.59
PACSIN3-209ENST00000532457 SRPRBQ9Y5M8 271 aaKnown RBP25■■□□□ 1.59
PACSIN3-209ENST00000532457 NFIBO00712 420 aa24.99■■□□□ 1.59
PACSIN3-209ENST00000532457 NR1I2O75469 434 aa24.99■■□□□ 1.59
PACSIN3-209ENST00000532457 CFBP00751 764 aa24.99■■□□□ 1.59
PACSIN3-209ENST00000532457 ALAS1P13196 640 aa24.99■■□□□ 1.59
PACSIN3-209ENST00000532457 KRI1Q8N9T8 703 aaKnown RBP24.99■■□□□ 1.59
PACSIN3-209ENST00000532457 ZNF214Q9UL59 606 aaPredicted RBP24.99■■□□□ 1.59
PACSIN3-209ENST00000532457 MORC2Q9Y6X9 1032 aaPredicted RBP24.99■■□□□ 1.59
PACSIN3-209ENST00000532457 COL11A1P12107 1806 aaPredicted RBP24.99■■□□□ 1.59
PACSIN3-209ENST00000532457 A0A1B0GVL5 298 aa24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 FDX1P10109 184 aa24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 SNW1Q13573 536 aaKnown RBP24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 TAF1CQ15572 869 aaPredicted RBP24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 SPECC1Q5M775 1068 aa24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 ENGASEQ8NFI3 743 aa24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 ASCC2Q9H1I8 757 aaPredicted RBP24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 CCNT1O60563 726 aaKnown RBP24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 CUTAO60888 179 aa24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 JMYQ8N9B5 988 aa24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 FSIP1Q8NA03 581 aa24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 SMCR8Q8TEV9 937 aaPredicted RBP24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 CRYGNQ8WXF5 182 aa24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 ANO3Q9BYT9 981 aa24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 ZFYVE28Q9HCC9 887 aa24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 HOMER2Q9NSB8 354 aa24.98■■□□□ 1.59
PACSIN3-209ENST00000532457 CMA1P23946 247 aa24.97■■□□□ 1.59
PACSIN3-209ENST00000532457 DACT1Q9NYF0 836 aa24.97■■□□□ 1.59
PACSIN3-209ENST00000532457 MYH7BA7E2Y1 1941 aa24.97■■□□□ 1.59
PACSIN3-209ENST00000532457 MYPNQ86TC9 1320 aa24.97■■□□□ 1.59
PACSIN3-209ENST00000532457 GCOM1H8Y6P7 765 aaPredicted RBP24.96■■□□□ 1.59
PACSIN3-209ENST00000532457 TDP2O95551 362 aa24.96■■□□□ 1.59
PACSIN3-209ENST00000532457 POLR2MP0CAP2 368 aa24.96■■□□□ 1.59
PACSIN3-209ENST00000532457 NDUFA8P51970 172 aa24.96■■□□□ 1.59
PACSIN3-209ENST00000532457 FCHSD1Q86WN1 690 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms