RNA–Protein interactions for RNA: ENST00000532392.1

CTSB-224, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-224ENST00000532392 COL6A1P12109 1028 aa16.83■□□□□ 0.28
CTSB-224ENST00000532392 FGD1P98174 961 aa16.83■□□□□ 0.28
CTSB-224ENST00000532392 CCDC144BQ3MJ40 725 aa16.83■□□□□ 0.28
CTSB-224ENST00000532392 MICU3Q86XE3 530 aa16.83■□□□□ 0.28
CTSB-224ENST00000532392 RAB11FIP4Q86YS3 637 aa16.83■□□□□ 0.28
CTSB-224ENST00000532392 SRBD1Q8N5C6 995 aaKnown RBP16.83■□□□□ 0.28
CTSB-224ENST00000532392 DPF3Q92784 378 aa16.83■□□□□ 0.28
CTSB-224ENST00000532392 RRP36Q96EU6 259 aaKnown RBP16.83■□□□□ 0.28
CTSB-224ENST00000532392 XPNPEP3Q9NQH7 507 aa16.83■□□□□ 0.28
CTSB-224ENST00000532392 TNRC18O15417 2968 aaPredicted RBP16.83■□□□□ 0.28
CTSB-224ENST00000532392 BAZ2BQ9UIF8 2168 aaKnown RBP16.82■□□□□ 0.28
CTSB-224ENST00000532392 ZBTB43O43298 467 aa16.82■□□□□ 0.28
CTSB-224ENST00000532392 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
CTSB-224ENST00000532392 RPS6KB1P23443 525 aa16.82■□□□□ 0.28
CTSB-224ENST00000532392 LRRC41Q15345 812 aa16.82■□□□□ 0.28
CTSB-224ENST00000532392 GJC2Q5T442 439 aaPredicted RBP16.82■□□□□ 0.28
CTSB-224ENST00000532392 Q6ZUG5 572 aa16.82■□□□□ 0.28
CTSB-224ENST00000532392 SYTL5Q8TDW5 730 aaPredicted RBP16.82■□□□□ 0.28
CTSB-224ENST00000532392 PIBF1Q8WXW3 757 aa16.82■□□□□ 0.28
CTSB-224ENST00000532392 DDX49Q9Y6V7 483 aaKnown RBP16.82■□□□□ 0.28
CTSB-224ENST00000532392 KLF18A0A0U1RQI7 1052 aa16.81■□□□□ 0.28
CTSB-224ENST00000532392 KBTBD13C9JR72 458 aa16.81■□□□□ 0.28
CTSB-224ENST00000532392 OPLAHO14841 1288 aa16.81■□□□□ 0.28
CTSB-224ENST00000532392 DUSP11O75319 330 aaKnown RBP16.81■□□□□ 0.28
CTSB-224ENST00000532392 PGK1P00558 417 aa16.81■□□□□ 0.28
CTSB-224ENST00000532392 CFBP00751 764 aa16.81■□□□□ 0.28
CTSB-224ENST00000532392 MYCNP04198 464 aaPredicted RBP16.81■□□□□ 0.28
CTSB-224ENST00000532392 GHRHRQ02643 423 aa16.81■□□□□ 0.28
CTSB-224ENST00000532392 TMTC3Q6ZXV5 915 aa16.81■□□□□ 0.28
CTSB-224ENST00000532392 EEPD1Q7L9B9 569 aa16.81■□□□□ 0.28
CTSB-224ENST00000532392 CMTR1Q8N1G2 835 aaKnown RBP16.81■□□□□ 0.28
CTSB-224ENST00000532392 FBXL16Q8N461 479 aa16.81■□□□□ 0.28
CTSB-224ENST00000532392 SAMD3Q8N6K7 520 aa16.81■□□□□ 0.28
CTSB-224ENST00000532392 LENG1Q96BZ8 264 aaPredicted RBP16.81■□□□□ 0.28
CTSB-224ENST00000532392 MPHOSPH6Q99547 160 aaKnown RBP16.81■□□□□ 0.28
CTSB-224ENST00000532392 VTA1Q9NP79 307 aa16.81■□□□□ 0.28
CTSB-224ENST00000532392 RBM28Q9NW13 759 aaKnown RBP16.81■□□□□ 0.28
CTSB-224ENST00000532392 MAP3K20Q9NYL2 800 aaKnown RBP16.81■□□□□ 0.28
CTSB-224ENST00000532392 SEC63Q9UGP8 760 aaKnown RBP16.81■□□□□ 0.28
CTSB-224ENST00000532392 MCM3APO60318 1980 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 B4DLN1 442 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 EIF5BO60841 1220 aaKnown RBP16.8■□□□□ 0.28
CTSB-224ENST00000532392 EDNRBP24530 442 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 HSD17B4P51659 736 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 MRPL12P52815 198 aaKnown RBP16.8■□□□□ 0.28
CTSB-224ENST00000532392 RCAN1P53805 252 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 RTN1Q16799 776 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 PRPF38BQ5VTL8 546 aaKnown RBP16.8■□□□□ 0.28
CTSB-224ENST00000532392 TAPT1Q6NXT6 567 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 RNF180Q86T96 592 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 FBXO16Q8IX29 292 aaPredicted RBP16.8■□□□□ 0.28
CTSB-224ENST00000532392 CCDC82Q8N4S0 544 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 NSUN6Q8TEA1 469 aaKnown RBP16.8■□□□□ 0.28
CTSB-224ENST00000532392 BRF1Q92994 677 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 TAAR1Q96RJ0 339 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 AGXT2Q9BYV1 514 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 TM6SF1Q9BZW5 370 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 SENP6Q9GZR1 1112 aaPredicted RBP16.8■□□□□ 0.28
CTSB-224ENST00000532392 ZSWIM6Q9HCJ5 1215 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 COL20A1Q9P218 1284 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 LCTP09848 1927 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 MYH6P13533 1939 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 FRMPD3Q5JV73 1810 aa16.8■□□□□ 0.28
CTSB-224ENST00000532392 ADCY6O43306 1168 aa16.79■□□□□ 0.28
CTSB-224ENST00000532392 EVI5O60447 810 aa16.79■□□□□ 0.28
CTSB-224ENST00000532392 ADAMTS4O75173 837 aa16.79■□□□□ 0.28
CTSB-224ENST00000532392 ADCYAP1R1P41586 468 aa16.79■□□□□ 0.28
CTSB-224ENST00000532392 TNFAIP2Q03169 654 aa16.79■□□□□ 0.28
CTSB-224ENST00000532392 PDE4DQ08499 809 aa16.79■□□□□ 0.28
CTSB-224ENST00000532392 APOBRQ0VD83 1088 aa16.79■□□□□ 0.28
CTSB-224ENST00000532392 IQSEC1Q6DN90 963 aa16.79■□□□□ 0.28
CTSB-224ENST00000532392 RUFY3Q7L099 469 aa16.79■□□□□ 0.28
CTSB-224ENST00000532392 RMDN3Q96TC7 470 aa16.79■□□□□ 0.28
CTSB-224ENST00000532392 PDGFCQ9NRA1 345 aa16.79■□□□□ 0.28
CTSB-224ENST00000532392 NAP1L2Q9ULW6 460 aaPredicted RBP16.79■□□□□ 0.28
CTSB-224ENST00000532392 SYNRGQ9UMZ2 1314 aa16.78■□□□□ 0.28
CTSB-224ENST00000532392 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.78■□□□□ 0.28
CTSB-224ENST00000532392 GOLGA8AA7E2F4 631 aa16.78■□□□□ 0.28
CTSB-224ENST00000532392 GOLGA8BA8MQT2 603 aa16.78■□□□□ 0.28
CTSB-224ENST00000532392 GCOM1H8Y6P7 765 aaPredicted RBP16.78■□□□□ 0.28
CTSB-224ENST00000532392 POLR2MP0CAP2 368 aa16.78■□□□□ 0.28
CTSB-224ENST00000532392 PPP2R5BQ15173 497 aa16.78■□□□□ 0.28
CTSB-224ENST00000532392 NOL8Q76FK4 1167 aaKnown RBP16.78■□□□□ 0.28
CTSB-224ENST00000532392 KLHDC9Q8NEP7 349 aa16.78■□□□□ 0.28
CTSB-224ENST00000532392 IWS1Q96ST2 819 aa16.78■□□□□ 0.28
CTSB-224ENST00000532392 SPC25Q9HBM1 224 aa16.78■□□□□ 0.28
CTSB-224ENST00000532392 NR2E3Q9Y5X4 410 aa16.78■□□□□ 0.28
CTSB-224ENST00000532392 CYP46A1Q9Y6A2 500 aa16.78■□□□□ 0.28
CTSB-224ENST00000532392 RBM47A0AV96 593 aaKnown RBP16.77■□□□□ 0.28
CTSB-224ENST00000532392 SMPD1P17405 629 aa16.77■□□□□ 0.28
CTSB-224ENST00000532392 CDC27P30260 824 aa16.77■□□□□ 0.28
CTSB-224ENST00000532392 HOXA13P31271 388 aaPredicted RBP16.77■□□□□ 0.28
CTSB-224ENST00000532392 METAP2P50579 478 aaKnown RBP eCLIP16.77■□□□□ 0.282e-8■■■■■ 46.2
CTSB-224ENST00000532392 GJA9P57773 515 aa16.77■□□□□ 0.28
CTSB-224ENST00000532392 ARHGEF16Q5VV41 709 aa16.77■□□□□ 0.28
CTSB-224ENST00000532392 TSEN34Q9BSV6 310 aaKnown RBP16.77■□□□□ 0.28
CTSB-224ENST00000532392 UPF3AQ9H1J1 476 aaKnown RBP16.77■□□□□ 0.28
CTSB-224ENST00000532392 FAM217BQ9NTX9 383 aaPredicted RBP16.77■□□□□ 0.28
CTSB-224ENST00000532392 PHF24Q9UPV7 400 aa16.77■□□□□ 0.28
CTSB-224ENST00000532392 GNEQ9Y223 722 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms