RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 CCZ1P86791 482 aaPredicted RBP17.14■□□□□ 0.34
SRPRA-206ENST00000532259 MTFR1LQ9H019 292 aa17.14■□□□□ 0.34
SRPRA-206ENST00000532259 CIAPIN1Q6FI81 312 aa17.14■□□□□ 0.33
SRPRA-206ENST00000532259 GMCL1P1Q8NEA9 526 aa17.14■□□□□ 0.33
SRPRA-206ENST00000532259 NUDT12Q9BQG2 462 aa17.14■□□□□ 0.33
SRPRA-206ENST00000532259 HERC5Q9UII4 1024 aaKnown RBP17.14■□□□□ 0.33
SRPRA-206ENST00000532259 MYH7BA7E2Y1 1941 aa17.14■□□□□ 0.33
SRPRA-206ENST00000532259 LAD1O00515 517 aa17.13■□□□□ 0.33
SRPRA-206ENST00000532259 BMP3P12645 472 aa17.13■□□□□ 0.33
SRPRA-206ENST00000532259 ZNF18P17022 549 aa17.13■□□□□ 0.33
SRPRA-206ENST00000532259 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
SRPRA-206ENST00000532259 JDP2Q8WYK2 163 aa17.13■□□□□ 0.33
SRPRA-206ENST00000532259 EEF2KMTQ96G04 330 aa17.13■□□□□ 0.33
SRPRA-206ENST00000532259 CCSER1Q9C0I3 900 aa17.13■□□□□ 0.33
SRPRA-206ENST00000532259 MYOZ2Q9NPC6 264 aa17.13■□□□□ 0.33
SRPRA-206ENST00000532259 ZBTB21Q9ULJ3 1066 aa17.13■□□□□ 0.33
SRPRA-206ENST00000532259 MRPL12P52815 198 aaKnown RBP17.13■□□□□ 0.33
SRPRA-206ENST00000532259 SAMD7Q7Z3H4 446 aa17.13■□□□□ 0.33
SRPRA-206ENST00000532259 MEIS2O14770 477 aa17.12■□□□□ 0.33
SRPRA-206ENST00000532259 MARCH6O60337 910 aa17.12■□□□□ 0.33
SRPRA-206ENST00000532259 SFPQP23246 707 aaKnown RBP eCLIP17.12■□□□□ 0.33
SRPRA-206ENST00000532259 TPD52L1Q16890 204 aaPredicted RBP17.12■□□□□ 0.33
SRPRA-206ENST00000532259 SYDE2Q5VT97 1194 aa17.12■□□□□ 0.33
SRPRA-206ENST00000532259 GMCL1Q96IK5 515 aa17.12■□□□□ 0.33
SRPRA-206ENST00000532259 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
SRPRA-206ENST00000532259 CBFA2T2O43439 604 aa17.12■□□□□ 0.33
SRPRA-206ENST00000532259 ERCC5P28715 1186 aaPredicted RBP17.12■□□□□ 0.33
SRPRA-206ENST00000532259 PPP4R3BQ5MIZ7 849 aa17.12■□□□□ 0.33
SRPRA-206ENST00000532259 FAM83BQ5T0W9 1011 aa17.12■□□□□ 0.33
SRPRA-206ENST00000532259 PPP1R18Q6NYC8 613 aa17.12■□□□□ 0.33
SRPRA-206ENST00000532259 IGSF22Q8N9C0 903 aa17.12■□□□□ 0.33
SRPRA-206ENST00000532259 HAS1Q92839 578 aa17.12■□□□□ 0.33
SRPRA-206ENST00000532259 ZBED3Q96IU2 234 aaPredicted RBP17.12■□□□□ 0.33
SRPRA-206ENST00000532259 LRWD1Q9UFC0 647 aa17.12■□□□□ 0.33
SRPRA-206ENST00000532259 DDX25Q9UHL0 483 aaKnown RBP17.12■□□□□ 0.33
SRPRA-206ENST00000532259 TRIM49BA6NDI0 452 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 OPLAHO14841 1288 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 HOXA13P31271 388 aaPredicted RBP17.11■□□□□ 0.33
SRPRA-206ENST00000532259 GSDMDP57764 484 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 DGKZQ13574 1117 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 KMT5BQ4FZB7 885 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 NLGN2Q8NFZ4 835 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 HPS3Q969F9 1004 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 PYM1Q9BRP8 204 aaKnown RBP17.11■□□□□ 0.33
SRPRA-206ENST00000532259 PRR12Q9ULL5 1215 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 TEX33O43247 280 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 CCT6AP40227 531 aaKnown RBP17.11■□□□□ 0.33
SRPRA-206ENST00000532259 PRCPP42785 496 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 RASA3Q14644 834 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 SPATA1Q5VX52 437 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 VSTM4Q8IW00 320 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 KBTBD4Q9NVX7 518 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 IMPACTQ9P2X3 320 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 GJA3Q9Y6H8 435 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 ARFGEF1Q9Y6D6 1849 aa17.11■□□□□ 0.33
SRPRA-206ENST00000532259 COL2A1P02458 1487 aaPredicted RBP17.1■□□□□ 0.33
SRPRA-206ENST00000532259 KLRC4O43908 158 aa17.1■□□□□ 0.33
SRPRA-206ENST00000532259 NELFBQ8WX92 580 aa17.1■□□□□ 0.33
SRPRA-206ENST00000532259 FBXO28Q9NVF7 368 aa17.1■□□□□ 0.33
SRPRA-206ENST00000532259 FER1L6Q2WGJ9 1857 aa17.1■□□□□ 0.33
SRPRA-206ENST00000532259 UQCRHLA0A096LP55 91 aa17.1■□□□□ 0.33
SRPRA-206ENST00000532259 UQCRHP07919 91 aa17.1■□□□□ 0.33
SRPRA-206ENST00000532259 ECM1Q16610 540 aa17.1■□□□□ 0.33
SRPRA-206ENST00000532259 TBC1D10BQ4KMP7 808 aaPredicted RBP17.1■□□□□ 0.33
SRPRA-206ENST00000532259 FBXO11Q86XK2 927 aa17.1■□□□□ 0.33
SRPRA-206ENST00000532259 TBC1D5Q92609 795 aa17.1■□□□□ 0.33
SRPRA-206ENST00000532259 ZNF592Q92610 1267 aa17.1■□□□□ 0.33
SRPRA-206ENST00000532259 SGIP1Q9BQI5 828 aa17.1■□□□□ 0.33
SRPRA-206ENST00000532259 AMNQ9BXJ7 453 aa17.1■□□□□ 0.33
SRPRA-206ENST00000532259 MYO1BO43795 1136 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 GRB10Q13322 594 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 ZNF658Q5TYW1 1059 aaPredicted RBP17.09■□□□□ 0.33
SRPRA-206ENST00000532259 CCDC174Q6PII3 467 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 KCNK18Q7Z418 384 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 MTMR14Q8NCE2 650 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 PNMA5Q96PV4 448 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 ANO3Q9BYT9 981 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 VPS33BQ9H267 617 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 TMX2Q9Y320 296 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 BRCA1P38398 1863 aaKnown RBP17.09■□□□□ 0.33
SRPRA-206ENST00000532259 CAP2P40123 477 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 PMS1P54277 932 aaKnown RBP17.09■□□□□ 0.33
SRPRA-206ENST00000532259 ADKP55263 362 aaKnown RBP17.09■□□□□ 0.33
SRPRA-206ENST00000532259 ASIC1P78348 528 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 PAK1Q13153 545 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 APTXQ7Z2E3 356 aaKnown RBP17.09■□□□□ 0.33
SRPRA-206ENST00000532259 SNX29Q8TEQ0 813 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 TSC1Q92574 1164 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 AK8Q96MA6 479 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 FZD1Q9UP38 647 aa17.09■□□□□ 0.33
SRPRA-206ENST00000532259 GMPSP49915 693 aaPredicted RBP17.08■□□□□ 0.33
SRPRA-206ENST00000532259 MCM6Q14566 821 aa17.08■□□□□ 0.33
SRPRA-206ENST00000532259 TMEM266Q2M3C6 531 aa17.08■□□□□ 0.33
SRPRA-206ENST00000532259 DYMQ7RTS9 669 aa17.08■□□□□ 0.33
SRPRA-206ENST00000532259 CPLX3Q8WVH0 158 aa17.08■□□□□ 0.33
SRPRA-206ENST00000532259 KIFC2Q96AC6 838 aa17.08■□□□□ 0.33
SRPRA-206ENST00000532259 CALML4Q96GE6 196 aa17.08■□□□□ 0.33
SRPRA-206ENST00000532259 CDK5RAP3Q96JB5 506 aa17.08■□□□□ 0.33
SRPRA-206ENST00000532259 ARHGEF10LQ9HCE6 1279 aa17.08■□□□□ 0.33
SRPRA-206ENST00000532259 BLOC1S4Q9NUP1 217 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms