RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ARMC2Q8NEN0 867 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 RUFY2Q8WXA3 655 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 GPKOWQ92917 476 aaPredicted RBP eCLIP6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 MKNK1Q9BUB5 465 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 ASCC2Q9H1I8 757 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 EFCC1Q9HA90 598 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 PRDM16Q9HAZ2 1276 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 CYLDQ9NQC7 956 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 ANAPC4Q9UJX5 808 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 DOLKQ9UPQ8 538 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 TMX2Q9Y320 296 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 TRIM17Q9Y577 477 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 COL4A3BPQ9Y5P4 624 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 LAMB1P07942 1786 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 MYH1P12882 1939 aa6.82□□□□□ -1.32
HMGB1P42-201ENST00000532126 ZMYM6O95789 1325 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 RAD50Q92878 1312 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 TSPY2A6NKD2 308 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 BHMG1C9JSJ3 638 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 ZNF213O14771 459 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 EIF3JO75822 258 aaKnown RBP6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 TSPY3P0CV98 308 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 TSPY8P0CW00 308 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 BCRP11274 1271 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 XRCC5P13010 732 aaKnown RBP6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 CHMLP26374 656 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 GCLCP48506 637 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 FCGRTP55899 365 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 TFAP4Q01664 338 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 MTMR3Q13615 1198 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 BMS1Q14692 1282 aaKnown RBP6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 FAM47AQ5JRC9 791 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 ERICH6BQ5W0A0 696 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 PDXDC2PQ6P474 469 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 OTOP1Q7RTM1 612 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 SKAP1Q86WV1 359 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 SIAH1Q8IUQ4 282 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 SPICE1Q8N0Z3 855 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 NEDD1Q8NHV4 660 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 LPAR1Q92633 364 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 ABHD8Q96I13 439 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 FAM161BQ96MY7 647 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 P2RX7Q99572 595 aaKnown RBP6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 ARHGAP39Q9C0H5 1083 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 RPAP3Q9H6T3 665 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 VCPKMTQ9H867 229 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 TOMM22Q9NS69 142 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 CTNNA3Q9UI47 895 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 MYH7P12883 1935 aa6.81□□□□□ -1.32
HMGB1P42-201ENST00000532126 IGKV6D-41A0A0C4DH26 115 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 PPP1R12AO14974 1030 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 ORC4O43929 436 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 RANBP6O60518 1105 aaKnown RBP6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 NR1I2O75469 434 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 PARNO95453 639 aaKnown RBP6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 TTLL1O95922 423 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 GNRH1P01148 92 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 PCP11498 1178 aaKnown RBP6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 HOXD10P28358 340 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 WEE1P30291 646 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 PSMC4P43686 418 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 HAND2P61296 217 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 HERVK_113P62684 666 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 EHHADHQ08426 723 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 IMMTQ16891 758 aaKnown RBP6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 FAM110CQ1W6H9 321 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 BMP2KLQ5H9B9 411 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 RRP12Q5JTH9 1297 aaKnown RBP6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 RNF20Q5VTR2 975 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 ALG1LQ6GMV1 187 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 ALKBH2Q6NS38 261 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 FBXO46Q6PJ61 603 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 CATSPERGQ6ZRH7 1159 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 MFSD6Q6ZSS7 791 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 JAZF1Q86VZ6 243 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 SCUBE3Q8IX30 993 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 GPRC5AQ8NFJ5 357 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 TPCN2Q8NHX9 752 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 CEP95Q96GE4 821 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 DSCC1Q9BVC3 393 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 RNF41Q9H4P4 317 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 INCENPQ9NQS7 918 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 PPP4R2Q9NY27 417 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 MTMR4Q9NYA4 1195 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 NYAP2Q9P242 653 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 CLIP2Q9UDT6 1046 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 HPS5Q9UPZ3 1129 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 PTPN22Q9Y2R2 807 aa6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.8□□□□□ -1.32
HMGB1P42-201ENST00000532126 PHIPQ8WWQ0 1821 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 CCDC194A0A1B0GVG4 234 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 CCDC85CA6NKD9 419 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 SFI1A8K8P3 1242 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 F5H6K3 240 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 M0R2N6 131 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 TNPO2O14787 897 aaKnown RBP6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 WDR46O15213 610 aaKnown RBP6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 DNAJC6O75061 913 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 FLOT1O75955 427 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 FGRP09769 529 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms