RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 PCDHB15Q9Y5E8 787 aa20.49■□□□□ 0.87
PKP3-208ENST00000531857 RANBP6O60518 1105 aaKnown RBP20.48■□□□□ 0.87
PKP3-208ENST00000531857 ICAM1P05362 532 aa20.48■□□□□ 0.87
PKP3-208ENST00000531857 NOVP48745 357 aa20.48■□□□□ 0.87
PKP3-208ENST00000531857 BAATQ14032 418 aaPredicted RBP20.48■□□□□ 0.87
PKP3-208ENST00000531857 CCDC96Q2M329 555 aa20.48■□□□□ 0.87
PKP3-208ENST00000531857 PPP4R3BQ5MIZ7 849 aa20.48■□□□□ 0.87
PKP3-208ENST00000531857 VPS53Q5VIR6 699 aa20.48■□□□□ 0.87
PKP3-208ENST00000531857 SEZ6LQ9BYH1 1024 aa20.48■□□□□ 0.87
PKP3-208ENST00000531857 ALDH8A1Q9H2A2 487 aaPredicted RBP20.48■□□□□ 0.87
PKP3-208ENST00000531857 RANBP17Q9H2T7 1088 aaKnown RBP20.48■□□□□ 0.87
PKP3-208ENST00000531857 SCN10AQ9Y5Y9 1956 aa20.48■□□□□ 0.87
PKP3-208ENST00000531857 NFIBO00712 420 aa20.47■□□□□ 0.87
PKP3-208ENST00000531857 DUSP28Q4G0W2 176 aa20.47■□□□□ 0.87
PKP3-208ENST00000531857 TRMT13Q9NUP7 481 aaKnown RBP20.47■□□□□ 0.87
PKP3-208ENST00000531857 SLC4A7Q9Y6M7 1214 aa20.47■□□□□ 0.87
PKP3-208ENST00000531857 TRANK1O15050 2925 aa20.47■□□□□ 0.87
PKP3-208ENST00000531857 TANC1Q9C0D5 1861 aa20.47■□□□□ 0.87
PKP3-208ENST00000531857 TRIP12Q14669 1992 aaPredicted RBP20.46■□□□□ 0.87
PKP3-208ENST00000531857 CYP2C9P11712 490 aa20.46■□□□□ 0.87
PKP3-208ENST00000531857 MX1P20591 662 aa20.46■□□□□ 0.87
PKP3-208ENST00000531857 ALDH5A1P51649 535 aaPredicted RBP20.46■□□□□ 0.87
PKP3-208ENST00000531857 RPUSD2Q8IZ73 545 aaKnown RBP20.46■□□□□ 0.87
PKP3-208ENST00000531857 ADAMTS19Q8TE59 1207 aa20.46■□□□□ 0.87
PKP3-208ENST00000531857 DCAF4Q8WV16 495 aa20.46■□□□□ 0.87
PKP3-208ENST00000531857 WDR11Q9BZH6 1224 aa20.46■□□□□ 0.87
PKP3-208ENST00000531857 ANAPC4Q9UJX5 808 aa20.46■□□□□ 0.87
PKP3-208ENST00000531857 PTPRSQ13332 1948 aa20.45■□□□□ 0.86
PKP3-208ENST00000531857 NCOR1O75376 2440 aa20.45■□□□□ 0.86
PKP3-208ENST00000531857 ORC4O43929 436 aa20.45■□□□□ 0.86
PKP3-208ENST00000531857 MRPS5P82675 430 aaKnown RBP20.45■□□□□ 0.86
PKP3-208ENST00000531857 TTLL4Q14679 1199 aa20.45■□□□□ 0.86
PKP3-208ENST00000531857 BTNL9Q6UXG8 535 aa20.45■□□□□ 0.86
PKP3-208ENST00000531857 PPP1R13LQ8WUF5 828 aa20.45■□□□□ 0.86
PKP3-208ENST00000531857 FRMPD2Q68DX3 1309 aaPredicted RBP20.45■□□□□ 0.86
PKP3-208ENST00000531857 TET1Q8NFU7 2136 aa20.44■□□□□ 0.86
PKP3-208ENST00000531857 ZBBXA8MT70 800 aa20.44■□□□□ 0.86
PKP3-208ENST00000531857 FGRP09769 529 aa20.44■□□□□ 0.86
PKP3-208ENST00000531857 COL9A1P20849 921 aa20.44■□□□□ 0.86
PKP3-208ENST00000531857 PURAQ00577 322 aaKnown RBP20.44■□□□□ 0.86
PKP3-208ENST00000531857 SYDE2Q5VT97 1194 aa20.44■□□□□ 0.86
PKP3-208ENST00000531857 PPP2R2DQ66LE6 453 aa20.44■□□□□ 0.86
PKP3-208ENST00000531857 SLC30A10Q6XR72 485 aa20.44■□□□□ 0.86
PKP3-208ENST00000531857 TMEM47Q9BQJ4 181 aa20.44■□□□□ 0.86
PKP3-208ENST00000531857 GPCPD1Q9NPB8 672 aa20.44■□□□□ 0.86
PKP3-208ENST00000531857 ADD3Q9UEY8 706 aaKnown RBP20.44■□□□□ 0.86
PKP3-208ENST00000531857 PCDHA11Q9Y5I1 949 aa20.44■□□□□ 0.86
PKP3-208ENST00000531857 TNKSO95271 1327 aa20.44■□□□□ 0.86
PKP3-208ENST00000531857 SALL3Q9BXA9 1300 aa20.44■□□□□ 0.86
PKP3-208ENST00000531857 BDP1A6H8Y1 2624 aa20.43■□□□□ 0.86
PKP3-208ENST00000531857 RBM47A0AV96 593 aaKnown RBP20.43■□□□□ 0.86
PKP3-208ENST00000531857 PTPDC1A2A3K4 754 aa20.43■□□□□ 0.86
PKP3-208ENST00000531857 MYL3P08590 195 aa20.43■□□□□ 0.86
PKP3-208ENST00000531857 ATP2A2P16615 1042 aaKnown RBP20.43■□□□□ 0.86
PKP3-208ENST00000531857 DEFB128Q7Z7B8 93 aa20.43■□□□□ 0.86
PKP3-208ENST00000531857 CLEC4DQ8WXI8 215 aa20.43■□□□□ 0.86
PKP3-208ENST00000531857 POLR3EQ9NVU0 708 aa20.43■□□□□ 0.86
PKP3-208ENST00000531857 SUPT16HQ9Y5B9 1047 aaKnown RBP20.43■□□□□ 0.86
PKP3-208ENST00000531857 PRRC2BQ5JSZ5 2229 aaKnown RBP20.42■□□□□ 0.86
PKP3-208ENST00000531857 CALML3P27482 149 aa20.42■□□□□ 0.86
PKP3-208ENST00000531857 RRP12Q5JTH9 1297 aaKnown RBP20.42■□□□□ 0.86
PKP3-208ENST00000531857 MICALL1Q8N3F8 863 aa20.42■□□□□ 0.86
PKP3-208ENST00000531857 OR6J1Q8NGC5 347 aa20.42■□□□□ 0.86
PKP3-208ENST00000531857 TOMM22Q9NS69 142 aa20.42■□□□□ 0.86
PKP3-208ENST00000531857 RAPGEFL1Q9UHV5 662 aa20.42■□□□□ 0.86
PKP3-208ENST00000531857 MYH6P13533 1939 aa20.41■□□□□ 0.86
PKP3-208ENST00000531857 SUPT20HL2P0C7V6 817 aa20.41■□□□□ 0.86
PKP3-208ENST00000531857 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
PKP3-208ENST00000531857 CPT1AP50416 773 aa20.41■□□□□ 0.86
PKP3-208ENST00000531857 ALX1Q15699 326 aa20.41■□□□□ 0.86
PKP3-208ENST00000531857 NBPF20Q3BBV1 942 aa20.41■□□□□ 0.86
PKP3-208ENST00000531857 UHRF1Q96T88 793 aaPredicted RBP20.41■□□□□ 0.86
PKP3-208ENST00000531857 MTG1Q9BT17 334 aaPredicted RBP20.41■□□□□ 0.86
PKP3-208ENST00000531857 KIAA1217Q5T5P2 1943 aa20.41■□□□□ 0.86
PKP3-208ENST00000531857 LOC102724159A0A0B4J2E5 919 aa20.4■□□□□ 0.86
PKP3-208ENST00000531857 XIRP2A4UGR9 3374 aa20.4■□□□□ 0.86
PKP3-208ENST00000531857 RFXAPO00287 272 aa20.4■□□□□ 0.86
PKP3-208ENST00000531857 FGAP02671 866 aa20.4■□□□□ 0.86
PKP3-208ENST00000531857 PFKMP08237 780 aa20.4■□□□□ 0.86
PKP3-208ENST00000531857 PWP2Q15269 919 aaKnown RBP20.4■□□□□ 0.86
PKP3-208ENST00000531857 FAM47CQ5HY64 1035 aa20.4■□□□□ 0.86
PKP3-208ENST00000531857 RNF207Q6ZRF8 634 aa20.4■□□□□ 0.86
PKP3-208ENST00000531857 COPS5Q92905 334 aa20.4■□□□□ 0.86
PKP3-208ENST00000531857 CA3P07451 260 aa20.39■□□□□ 0.85
PKP3-208ENST00000531857 PDHBP11177 359 aa20.39■□□□□ 0.85
PKP3-208ENST00000531857 TFF2Q03403 129 aa20.39■□□□□ 0.85
PKP3-208ENST00000531857 EVI5LQ96CN4 794 aa20.39■□□□□ 0.85
PKP3-208ENST00000531857 FAM227BQ96M60 508 aa20.39■□□□□ 0.85
PKP3-208ENST00000531857 NECAB3Q96P71 396 aaPredicted RBP20.39■□□□□ 0.85
PKP3-208ENST00000531857 CERS4Q9HA82 394 aa20.39■□□□□ 0.85
PKP3-208ENST00000531857 GPHNQ9NQX3 736 aaPredicted RBP20.39■□□□□ 0.85
PKP3-208ENST00000531857 HELLSQ9NRZ9 838 aa20.39■□□□□ 0.85
PKP3-208ENST00000531857 TCP11L1Q9NUJ3 509 aa20.39■□□□□ 0.85
PKP3-208ENST00000531857 A0A0D9SFI3 127 aa20.38■□□□□ 0.85
PKP3-208ENST00000531857 RPS6P62753 249 aaKnown RBP20.38■□□□□ 0.85
PKP3-208ENST00000531857 PDE4DQ08499 809 aa20.38■□□□□ 0.85
PKP3-208ENST00000531857 TMEM67Q5HYA8 995 aa20.38■□□□□ 0.85
PKP3-208ENST00000531857 MYH7BA7E2Y1 1941 aa20.37■□□□□ 0.85
PKP3-208ENST00000531857 EPOPA6NHQ4 379 aa20.37■□□□□ 0.85
PKP3-208ENST00000531857 A6NJR5 290 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms