RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 ALDH8A1Q9H2A2 487 aaPredicted RBP22.5■■□□□ 1.19
UBXN1-212ENST00000531625 ANAPC4Q9UJX5 808 aa22.5■■□□□ 1.19
UBXN1-212ENST00000531625 LCTP09848 1927 aa22.49■■□□□ 1.19
UBXN1-212ENST00000531625 IGFBP4P22692 258 aa22.49■■□□□ 1.19
UBXN1-212ENST00000531625 PSMC6P62333 389 aa22.49■■□□□ 1.19
UBXN1-212ENST00000531625 MRPS5P82675 430 aaKnown RBP22.49■■□□□ 1.19
UBXN1-212ENST00000531625 CTDSPL2Q05D32 466 aa22.49■■□□□ 1.19
UBXN1-212ENST00000531625 TMEM63BQ5T3F8 832 aa22.49■■□□□ 1.19
UBXN1-212ENST00000531625 ANKRD45Q5TZF3 282 aa22.49■■□□□ 1.19
UBXN1-212ENST00000531625 BTNL9Q6UXG8 535 aa22.49■■□□□ 1.19
UBXN1-212ENST00000531625 VWCEQ96DN2 955 aa22.49■■□□□ 1.19
UBXN1-212ENST00000531625 RANBP17Q9H2T7 1088 aaKnown RBP22.49■■□□□ 1.19
UBXN1-212ENST00000531625 ADD3Q9UEY8 706 aaKnown RBP22.49■■□□□ 1.19
UBXN1-212ENST00000531625 SLC4A7Q9Y6M7 1214 aa22.49■■□□□ 1.19
UBXN1-212ENST00000531625 GBF1Q92538 1859 aa22.49■■□□□ 1.19
UBXN1-212ENST00000531625 REV3LO60673 3130 aa22.48■■□□□ 1.19
UBXN1-212ENST00000531625 ORC4O43929 436 aa22.48■■□□□ 1.19
UBXN1-212ENST00000531625 SUPT20HL2P0C7V6 817 aa22.48■■□□□ 1.19
UBXN1-212ENST00000531625 B4GALNT3Q6L9W6 998 aa22.48■■□□□ 1.19
UBXN1-212ENST00000531625 RASGRP2Q7LDG7 609 aa22.48■■□□□ 1.19
UBXN1-212ENST00000531625 SMC5Q8IY18 1101 aa22.48■■□□□ 1.19
UBXN1-212ENST00000531625 OTUD7AQ8TE49 926 aaPredicted RBP22.48■■□□□ 1.19
UBXN1-212ENST00000531625 INCENPQ9NQS7 918 aa22.48■■□□□ 1.19
UBXN1-212ENST00000531625 POLR3EQ9NVU0 708 aa22.48■■□□□ 1.19
UBXN1-212ENST00000531625 PCDHA11Q9Y5I1 949 aa22.48■■□□□ 1.19
UBXN1-212ENST00000531625 RBM47A0AV96 593 aaKnown RBP22.47■■□□□ 1.19
UBXN1-212ENST00000531625 RANBP6O60518 1105 aaKnown RBP22.47■■□□□ 1.19
UBXN1-212ENST00000531625 PFKMP08237 780 aa22.47■■□□□ 1.19
UBXN1-212ENST00000531625 FGRP09769 529 aa22.47■■□□□ 1.19
UBXN1-212ENST00000531625 BAATQ14032 418 aaPredicted RBP22.47■■□□□ 1.19
UBXN1-212ENST00000531625 CCDC85BQ15834 202 aaPredicted RBP22.47■■□□□ 1.19
UBXN1-212ENST00000531625 PURBQ96QR8 312 aaKnown RBP22.47■■□□□ 1.19
UBXN1-212ENST00000531625 ALDH5A1P51649 535 aaPredicted RBP22.46■■□□□ 1.19
UBXN1-212ENST00000531625 ALX1Q15699 326 aa22.46■■□□□ 1.19
UBXN1-212ENST00000531625 CCDC96Q2M329 555 aa22.46■■□□□ 1.19
UBXN1-212ENST00000531625 ERICH6BQ5W0A0 696 aa22.46■■□□□ 1.19
UBXN1-212ENST00000531625 ADAMTS19Q8TE59 1207 aa22.46■■□□□ 1.19
UBXN1-212ENST00000531625 SCLYQ96I15 445 aa22.46■■□□□ 1.19
UBXN1-212ENST00000531625 WDR11Q9BZH6 1224 aa22.46■■□□□ 1.19
UBXN1-212ENST00000531625 XIRP2A4UGR9 3374 aa22.46■■□□□ 1.19
UBXN1-212ENST00000531625 MX1P20591 662 aa22.45■■□□□ 1.18
UBXN1-212ENST00000531625 CPT1AP50416 773 aa22.45■■□□□ 1.18
UBXN1-212ENST00000531625 RABGGTBP53611 331 aa22.45■■□□□ 1.18
UBXN1-212ENST00000531625 PURAQ00577 322 aaKnown RBP22.45■■□□□ 1.18
UBXN1-212ENST00000531625 SYDE2Q5VT97 1194 aa22.45■■□□□ 1.18
UBXN1-212ENST00000531625 PPP2R2DQ66LE6 453 aa22.45■■□□□ 1.18
UBXN1-212ENST00000531625 CCDC136Q96JN2 1154 aa22.45■■□□□ 1.18
UBXN1-212ENST00000531625 NFIBO00712 420 aa22.44■■□□□ 1.18
UBXN1-212ENST00000531625 TNKSO95271 1327 aa22.44■■□□□ 1.18
UBXN1-212ENST00000531625 ATP2A2P16615 1042 aaKnown RBP22.44■■□□□ 1.18
UBXN1-212ENST00000531625 PRRC2BQ5JSZ5 2229 aaKnown RBP22.44■■□□□ 1.18
UBXN1-212ENST00000531625 TTBK2Q6IQ55 1244 aa22.44■■□□□ 1.18
UBXN1-212ENST00000531625 TSPYL2Q9H2G4 693 aaPredicted RBP22.44■■□□□ 1.18
UBXN1-212ENST00000531625 TRMT13Q9NUP7 481 aaKnown RBP22.44■■□□□ 1.18
UBXN1-212ENST00000531625 PNMA2Q9UL42 364 aa22.44■■□□□ 1.18
UBXN1-212ENST00000531625 MTMR7Q9Y216 660 aa22.44■■□□□ 1.18
UBXN1-212ENST00000531625 SCN10AQ9Y5Y9 1956 aa22.44■■□□□ 1.18
UBXN1-212ENST00000531625 SALL3Q9BXA9 1300 aa22.43■■□□□ 1.18
UBXN1-212ENST00000531625 ZBBXA8MT70 800 aa22.43■■□□□ 1.18
UBXN1-212ENST00000531625 TOP1P11387 765 aaKnown RBP22.43■■□□□ 1.18
UBXN1-212ENST00000531625 CYP2C9P11712 490 aa22.43■■□□□ 1.18
UBXN1-212ENST00000531625 COL9A1P20849 921 aa22.43■■□□□ 1.18
UBXN1-212ENST00000531625 SLC16A2P36021 539 aa22.43■■□□□ 1.18
UBXN1-212ENST00000531625 VPS53Q5VIR6 699 aa22.43■■□□□ 1.18
UBXN1-212ENST00000531625 UHRF1Q96T88 793 aaPredicted RBP22.43■■□□□ 1.18
UBXN1-212ENST00000531625 MTG1Q9BT17 334 aaPredicted RBP22.43■■□□□ 1.18
UBXN1-212ENST00000531625 TCP11L1Q9NUJ3 509 aa22.43■■□□□ 1.18
UBXN1-212ENST00000531625 NKRFO15226 690 aaKnown RBP eCLIP22.42■■□□□ 1.18
UBXN1-212ENST00000531625 MYOGP15173 224 aa22.42■■□□□ 1.18
UBXN1-212ENST00000531625 TTLL4Q14679 1199 aa22.42■■□□□ 1.18
UBXN1-212ENST00000531625 BRDTQ58F21 947 aaPredicted RBP22.42■■□□□ 1.18
UBXN1-212ENST00000531625 CLEC4DQ8WXI8 215 aa22.42■■□□□ 1.18
UBXN1-212ENST00000531625 TMEM47Q9BQJ4 181 aa22.42■■□□□ 1.18
UBXN1-212ENST00000531625 LNPKQ9C0E8 428 aa22.42■■□□□ 1.18
UBXN1-212ENST00000531625 GPHNQ9NQX3 736 aaPredicted RBP22.42■■□□□ 1.18
UBXN1-212ENST00000531625 PTPDC1A2A3K4 754 aa22.41■■□□□ 1.18
UBXN1-212ENST00000531625 KPNA6O60684 536 aa22.41■■□□□ 1.18
UBXN1-212ENST00000531625 MYL3P08590 195 aa22.41■■□□□ 1.18
UBXN1-212ENST00000531625 POU3F3P20264 500 aaPredicted RBP22.41■■□□□ 1.18
UBXN1-212ENST00000531625 RFC2P35250 354 aa22.41■■□□□ 1.18
UBXN1-212ENST00000531625 NUCB1Q02818 461 aa22.41■■□□□ 1.18
UBXN1-212ENST00000531625 IL27Q8NEV9 243 aa22.41■■□□□ 1.18
UBXN1-212ENST00000531625 OR6J1Q8NGC5 347 aa22.41■■□□□ 1.18
UBXN1-212ENST00000531625 EVI5LQ96CN4 794 aa22.41■■□□□ 1.18
UBXN1-212ENST00000531625 HELLSQ9NRZ9 838 aa22.41■■□□□ 1.18
UBXN1-212ENST00000531625 PPP4R2Q9NY27 417 aa22.41■■□□□ 1.18
UBXN1-212ENST00000531625 RAD50Q92878 1312 aa22.4■■□□□ 1.18
UBXN1-212ENST00000531625 PITPNM1O00562 1244 aa22.4■■□□□ 1.18
UBXN1-212ENST00000531625 EDNRBP24530 442 aa22.4■■□□□ 1.18
UBXN1-212ENST00000531625 NBPF20Q3BBV1 942 aa22.4■■□□□ 1.18
UBXN1-212ENST00000531625 TMEM67Q5HYA8 995 aa22.4■■□□□ 1.18
UBXN1-212ENST00000531625 NFRKBQ6P4R8 1299 aa22.4■■□□□ 1.18
UBXN1-212ENST00000531625 SLC30A10Q6XR72 485 aa22.4■■□□□ 1.18
UBXN1-212ENST00000531625 RNF207Q6ZRF8 634 aa22.4■■□□□ 1.18
UBXN1-212ENST00000531625 CHD1LQ86WJ1 897 aa22.4■■□□□ 1.18
UBXN1-212ENST00000531625 TICAM2Q86XR7 235 aa22.4■■□□□ 1.18
UBXN1-212ENST00000531625 SCFD2Q8WU76 684 aa22.4■■□□□ 1.18
UBXN1-212ENST00000531625 MPHOSPH6Q99547 160 aaKnown RBP22.4■■□□□ 1.18
UBXN1-212ENST00000531625 GPCPD1Q9NPB8 672 aa22.4■■□□□ 1.18
UBXN1-212ENST00000531625 WDR19Q8NEZ3 1342 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms