RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 TMEM260Q9NX78 707 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 TSKSQ9UJT2 592 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 MTMR6Q9Y217 621 aa20.24■□□□□ 0.83
CTSB-222ENST00000531551 MEIS2O14770 477 aa20.23■□□□□ 0.83
CTSB-222ENST00000531551 RPS6P62753 249 aaKnown RBP20.23■□□□□ 0.83
CTSB-222ENST00000531551 BAATQ14032 418 aaPredicted RBP20.23■□□□□ 0.83
CTSB-222ENST00000531551 KCTD2Q14681 263 aa20.23■□□□□ 0.83
CTSB-222ENST00000531551 NPY5RQ15761 445 aa20.23■□□□□ 0.83
CTSB-222ENST00000531551 SLC30A10Q6XR72 485 aa20.23■□□□□ 0.83
CTSB-222ENST00000531551 FAM177A1Q8N128 213 aaPredicted RBP20.23■□□□□ 0.83
CTSB-222ENST00000531551 MMP19Q99542 508 aa20.23■□□□□ 0.83
CTSB-222ENST00000531551 IVNS1ABPQ9Y6Y0 642 aa20.23■□□□□ 0.83
CTSB-222ENST00000531551 THSD7BQ9C0I4 1608 aa20.23■□□□□ 0.83
CTSB-222ENST00000531551 FCER1AP12319 257 aa20.22■□□□□ 0.83
CTSB-222ENST00000531551 MAPK4P31152 587 aa20.22■□□□□ 0.83
CTSB-222ENST00000531551 PGBD1Q96JS3 809 aa20.22■□□□□ 0.83
CTSB-222ENST00000531551 CFHR5Q9BXR6 569 aa20.22■□□□□ 0.83
CTSB-222ENST00000531551 SP3Q02447 781 aa20.22■□□□□ 0.83
CTSB-222ENST00000531551 GPR142Q7Z601 462 aa20.22■□□□□ 0.83
CTSB-222ENST00000531551 DAGLBQ8NCG7 672 aa20.22■□□□□ 0.83
CTSB-222ENST00000531551 SAGE1Q9NXZ1 904 aa20.22■□□□□ 0.83
CTSB-222ENST00000531551 PCDHA6Q9UN73 950 aa20.22■□□□□ 0.83
CTSB-222ENST00000531551 PCDHA8Q9Y5H6 950 aa20.22■□□□□ 0.83
CTSB-222ENST00000531551 SPDYE3A6NKU9 549 aa20.21■□□□□ 0.83
CTSB-222ENST00000531551 PLEKHH3Q7Z736 793 aa20.21■□□□□ 0.83
CTSB-222ENST00000531551 RGS22Q8NE09 1264 aa20.21■□□□□ 0.83
CTSB-222ENST00000531551 PURBQ96QR8 312 aaKnown RBP20.21■□□□□ 0.83
CTSB-222ENST00000531551 CYP39A1Q9NYL5 469 aa20.21■□□□□ 0.83
CTSB-222ENST00000531551 KIF28PB7ZC32 967 aa20.2■□□□□ 0.82
CTSB-222ENST00000531551 PDIA4P13667 645 aaKnown RBP20.2■□□□□ 0.82
CTSB-222ENST00000531551 DDIT3P35638 169 aa20.2■□□□□ 0.82
CTSB-222ENST00000531551 HSD17B4P51659 736 aa20.2■□□□□ 0.82
CTSB-222ENST00000531551 SMCHD1A6NHR9 2005 aa20.2■□□□□ 0.82
CTSB-222ENST00000531551 CCDC194A0A1B0GVG4 234 aa20.2■□□□□ 0.82
CTSB-222ENST00000531551 GPR25O00155 361 aa20.2■□□□□ 0.82
CTSB-222ENST00000531551 PIK3CDO00329 1044 aa20.2■□□□□ 0.82
CTSB-222ENST00000531551 TNPO2O14787 897 aaKnown RBP20.2■□□□□ 0.82
CTSB-222ENST00000531551 PGK2P07205 417 aa20.2■□□□□ 0.82
CTSB-222ENST00000531551 ZSCAN22P10073 491 aaPredicted RBP20.2■□□□□ 0.82
CTSB-222ENST00000531551 PIK3AP1Q6ZUJ8 805 aa20.2■□□□□ 0.82
CTSB-222ENST00000531551 SYTL5Q8TDW5 730 aaPredicted RBP20.2■□□□□ 0.82
CTSB-222ENST00000531551 FOXP1Q9H334 677 aaPredicted RBP20.2■□□□□ 0.82
CTSB-222ENST00000531551 WBP1LQ9NX94 342 aa20.2■□□□□ 0.82
CTSB-222ENST00000531551 PFASO15067 1338 aa20.19■□□□□ 0.82
CTSB-222ENST00000531551 PSMC4P43686 418 aa20.19■□□□□ 0.82
CTSB-222ENST00000531551 CLK2P49760 499 aaKnown RBP20.19■□□□□ 0.82
CTSB-222ENST00000531551 NUCB2P80303 420 aa20.19■□□□□ 0.82
CTSB-222ENST00000531551 LACTBP83111 547 aaPredicted RBP20.19■□□□□ 0.82
CTSB-222ENST00000531551 KIF22Q14807 665 aa20.19■□□□□ 0.82
CTSB-222ENST00000531551 NOM1Q5C9Z4 860 aaKnown RBP20.19■□□□□ 0.82
CTSB-222ENST00000531551 ARHGAP39Q9C0H5 1083 aa20.19■□□□□ 0.82
CTSB-222ENST00000531551 MAP3K20Q9NYL2 800 aaKnown RBP20.19■□□□□ 0.82
CTSB-222ENST00000531551 COL20A1Q9P218 1284 aa20.19■□□□□ 0.82
CTSB-222ENST00000531551 POTEB2H3BUK9 544 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 M0R2N6 131 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 STRNO43815 780 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 PTPREP23469 700 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 FCGRTP55899 365 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 FOXD4L6Q3SYB3 417 aaPredicted RBP20.18■□□□□ 0.82
CTSB-222ENST00000531551 FOXD4L3Q6VB84 417 aaPredicted RBP20.18■□□□□ 0.82
CTSB-222ENST00000531551 TAAR1Q96RJ0 339 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 BRD1O95696 1058 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 ADORA2AP29274 412 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 UBXN2AP68543 259 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 AP3B2Q13367 1082 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 EARS2Q5JPH6 523 aaKnown RBP20.18■□□□□ 0.82
CTSB-222ENST00000531551 KRT25Q7Z3Z0 450 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 NOSTRINQ8IVI9 506 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 SAMD3Q8N6K7 520 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 ANO3Q9BYT9 981 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 CHMP5Q9NZZ3 219 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 ZDHHC9Q9Y397 364 aa20.18■□□□□ 0.82
CTSB-222ENST00000531551 FAM205CA6NFA0 338 aa20.17■□□□□ 0.82
CTSB-222ENST00000531551 F13A1P00488 732 aa20.17■□□□□ 0.82
CTSB-222ENST00000531551 FOSP01100 380 aaPredicted RBP20.17■□□□□ 0.82
CTSB-222ENST00000531551 U2AF2P26368 475 aaKnown RBP eCLIP20.17■□□□□ 0.82
CTSB-222ENST00000531551 CTGFP29279 349 aa20.17■□□□□ 0.82
CTSB-222ENST00000531551 CNTN2Q02246 1040 aa20.17■□□□□ 0.82
CTSB-222ENST00000531551 GHRHRQ02643 423 aa20.17■□□□□ 0.82
CTSB-222ENST00000531551 DPP9Q86TI2 863 aa20.17■□□□□ 0.82
CTSB-222ENST00000531551 CIZ1Q9ULV3 898 aaPredicted RBP20.17■□□□□ 0.82
CTSB-222ENST00000531551 ATP2B1P20020 1258 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 RESTQ13127 1097 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 NONOQ15233 471 aaKnown RBP eCLIP20.16■□□□□ 0.822e-11■■■■■ 33.7
CTSB-222ENST00000531551 ARHGEF16Q5VV41 709 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 CD99L2Q8TCZ2 262 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 TNFRSF25Q93038 417 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 RMDN3Q96TC7 470 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 FKTNO75072 461 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 EIF2AK2P19525 551 aaKnown RBP20.16■□□□□ 0.82
CTSB-222ENST00000531551 GRB14Q14449 540 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 INF2Q27J81 1249 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 MCTP2Q6DN12 878 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 ABRAQ8N0Z2 381 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 TBCKQ8TEA7 893 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 ZNF296Q8WUU4 475 aaPredicted RBP20.16■□□□□ 0.82
CTSB-222ENST00000531551 TRIM47Q96LD4 638 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 ZSCAN16Q9H4T2 348 aaPredicted RBP20.16■□□□□ 0.82
CTSB-222ENST00000531551 EHMT1Q9H9B1 1298 aa20.16■□□□□ 0.82
CTSB-222ENST00000531551 SLC15A5A6NIM6 579 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms