RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 SGMS1Q86VZ5 419 aa16.78■□□□□ 0.28
FOXR1-202ENST00000531539 SRBD1Q8N5C6 995 aaKnown RBP16.78■□□□□ 0.28
FOXR1-202ENST00000531539 LENG1Q96BZ8 264 aaPredicted RBP16.78■□□□□ 0.28
FOXR1-202ENST00000531539 RRP36Q96EU6 259 aaKnown RBP16.78■□□□□ 0.28
FOXR1-202ENST00000531539 TAAR1Q96RJ0 339 aa16.78■□□□□ 0.28
FOXR1-202ENST00000531539 XPNPEP3Q9NQH7 507 aa16.78■□□□□ 0.28
FOXR1-202ENST00000531539 BRPF3Q9ULD4 1205 aa16.78■□□□□ 0.28
FOXR1-202ENST00000531539 KBTBD13C9JR72 458 aa16.77■□□□□ 0.28
FOXR1-202ENST00000531539 EPB41L2O43491 1005 aaKnown RBP16.77■□□□□ 0.28
FOXR1-202ENST00000531539 SMARCA1P28370 1054 aa16.77■□□□□ 0.28
FOXR1-202ENST00000531539 TRAF1Q13077 416 aa16.77■□□□□ 0.28
FOXR1-202ENST00000531539 LRRC41Q15345 812 aa16.77■□□□□ 0.28
FOXR1-202ENST00000531539 MICU3Q86XE3 530 aa16.77■□□□□ 0.28
FOXR1-202ENST00000531539 PDGFCQ9NRA1 345 aa16.77■□□□□ 0.28
FOXR1-202ENST00000531539 PDE4DIPQ5VU43 2346 aa16.77■□□□□ 0.28
FOXR1-202ENST00000531539 TNRC18O15417 2968 aaPredicted RBP16.77■□□□□ 0.27
FOXR1-202ENST00000531539 BAZ2BQ9UIF8 2168 aaKnown RBP16.77■□□□□ 0.27
FOXR1-202ENST00000531539 KLF18A0A0U1RQI7 1052 aa16.76■□□□□ 0.27
FOXR1-202ENST00000531539 B4DLN1 442 aa16.76■□□□□ 0.27
FOXR1-202ENST00000531539 ZBTB43O43298 467 aa16.76■□□□□ 0.27
FOXR1-202ENST00000531539 EVI5O60447 810 aa16.76■□□□□ 0.27
FOXR1-202ENST00000531539 CASTP20810 708 aaKnown RBP16.76■□□□□ 0.27
FOXR1-202ENST00000531539 MRPL12P52815 198 aaKnown RBP16.76■□□□□ 0.27
FOXR1-202ENST00000531539 TNFAIP2Q03169 654 aa16.76■□□□□ 0.27
FOXR1-202ENST00000531539 PDE4DQ08499 809 aa16.76■□□□□ 0.27
FOXR1-202ENST00000531539 APOA5Q6Q788 366 aa16.76■□□□□ 0.27
FOXR1-202ENST00000531539 SYTL5Q8TDW5 730 aaPredicted RBP16.76■□□□□ 0.27
FOXR1-202ENST00000531539 MPHOSPH6Q99547 160 aaKnown RBP16.76■□□□□ 0.27
FOXR1-202ENST00000531539 SPZ1Q9BXG8 430 aa16.76■□□□□ 0.27
FOXR1-202ENST00000531539 MAF1Q9H063 256 aa16.76■□□□□ 0.27
FOXR1-202ENST00000531539 KATNBL1Q9H079 304 aa16.76■□□□□ 0.27
FOXR1-202ENST00000531539 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.75■□□□□ 0.27
FOXR1-202ENST00000531539 hCG_1642624A0A1W2PR95 340 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 DNM1LO00429 736 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 DUSP11O75319 330 aaKnown RBP16.75■□□□□ 0.27
FOXR1-202ENST00000531539 COL6A1P12109 1028 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 RPS6KB1P23443 525 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 ADCYAP1R1P41586 468 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 APOBRQ0VD83 1088 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 IQSEC1Q6DN90 963 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 TAPT1Q6NXT6 567 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 RNF180Q86T96 592 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 FBXO16Q8IX29 292 aaPredicted RBP16.75■□□□□ 0.27
FOXR1-202ENST00000531539 DNERQ8NFT8 737 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 MORC4Q8TE76 937 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 BRF1Q92994 677 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 FERMT2Q96AC1 680 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 SEC63Q9UGP8 760 aaKnown RBP16.75■□□□□ 0.27
FOXR1-202ENST00000531539 NR2E3Q9Y5X4 410 aa16.75■□□□□ 0.27
FOXR1-202ENST00000531539 OPLAHO14841 1288 aa16.74■□□□□ 0.27
FOXR1-202ENST00000531539 HOXA13P31271 388 aaPredicted RBP16.74■□□□□ 0.27
FOXR1-202ENST00000531539 ATN1P54259 1190 aaPredicted RBP16.74■□□□□ 0.27
FOXR1-202ENST00000531539 ARHGEF16Q5VV41 709 aa16.74■□□□□ 0.27
FOXR1-202ENST00000531539 TMTC3Q6ZXV5 915 aa16.74■□□□□ 0.27
FOXR1-202ENST00000531539 NSUN6Q8TEA1 469 aaKnown RBP16.74■□□□□ 0.27
FOXR1-202ENST00000531539 RMDN3Q96TC7 470 aa16.74■□□□□ 0.27
FOXR1-202ENST00000531539 VTA1Q9NP79 307 aa16.74■□□□□ 0.27
FOXR1-202ENST00000531539 COL20A1Q9P218 1284 aa16.74■□□□□ 0.27
FOXR1-202ENST00000531539 LOC102724159A0A0B4J2E5 919 aa16.73■□□□□ 0.27
FOXR1-202ENST00000531539 GOLGA8AA7E2F4 631 aa16.73■□□□□ 0.27
FOXR1-202ENST00000531539 GOLGA8BA8MQT2 603 aa16.73■□□□□ 0.27
FOXR1-202ENST00000531539 H0YGN5 161 aa16.73■□□□□ 0.27
FOXR1-202ENST00000531539 GCOM1H8Y6P7 765 aaPredicted RBP16.73■□□□□ 0.27
FOXR1-202ENST00000531539 DYNC1LI2O43237 492 aaPredicted RBP16.73■□□□□ 0.27
FOXR1-202ENST00000531539 ADCY6O43306 1168 aa16.73■□□□□ 0.27
FOXR1-202ENST00000531539 C6orf222P0C671 652 aaPredicted RBP16.73■□□□□ 0.27
FOXR1-202ENST00000531539 POLR2MP0CAP2 368 aa16.73■□□□□ 0.27
FOXR1-202ENST00000531539 SMPD1P17405 629 aa16.73■□□□□ 0.27
FOXR1-202ENST00000531539 IRX5P78411 483 aaPredicted RBP16.73■□□□□ 0.27
FOXR1-202ENST00000531539 PWP2Q15269 919 aaKnown RBP16.73■□□□□ 0.27
FOXR1-202ENST00000531539 RTN1Q16799 776 aa16.73■□□□□ 0.27
FOXR1-202ENST00000531539 PRPF38BQ5VTL8 546 aaKnown RBP16.73■□□□□ 0.27
FOXR1-202ENST00000531539 RUFY3Q7L099 469 aa16.73■□□□□ 0.27
FOXR1-202ENST00000531539 SPC25Q9HBM1 224 aa16.73■□□□□ 0.27
FOXR1-202ENST00000531539 ZSWIM6Q9HCJ5 1215 aa16.73■□□□□ 0.27
FOXR1-202ENST00000531539 RBM28Q9NW13 759 aaKnown RBP16.73■□□□□ 0.27
FOXR1-202ENST00000531539 CYP46A1Q9Y6A2 500 aa16.73■□□□□ 0.27
FOXR1-202ENST00000531539 EIF2AK2P19525 551 aaKnown RBP16.72■□□□□ 0.27
FOXR1-202ENST00000531539 HSD17B4P51659 736 aa16.72■□□□□ 0.27
FOXR1-202ENST00000531539 KCNA10Q16322 511 aa16.72■□□□□ 0.27
FOXR1-202ENST00000531539 LRRC26Q2I0M4 334 aa16.72■□□□□ 0.27
FOXR1-202ENST00000531539 GNASQ5JWF2 1037 aa16.72■□□□□ 0.27
FOXR1-202ENST00000531539 TMEM63BQ5T3F8 832 aa16.72■□□□□ 0.27
FOXR1-202ENST00000531539 FCHSD1Q86WN1 690 aa16.72■□□□□ 0.27
FOXR1-202ENST00000531539 C7orf61Q8IZ16 206 aa16.72■□□□□ 0.27
FOXR1-202ENST00000531539 SAMD3Q8N6K7 520 aa16.72■□□□□ 0.27
FOXR1-202ENST00000531539 WDR11Q9BZH6 1224 aa16.72■□□□□ 0.27
FOXR1-202ENST00000531539 AP5M1Q9H0R1 490 aa16.72■□□□□ 0.27
FOXR1-202ENST00000531539 MAP3K20Q9NYL2 800 aaKnown RBP16.72■□□□□ 0.27
FOXR1-202ENST00000531539 V9GY48 417 aaPredicted RBP16.72■□□□□ 0.27
FOXR1-202ENST00000531539 SYNRGQ9UMZ2 1314 aa16.71■□□□□ 0.27
FOXR1-202ENST00000531539 MCM3APO60318 1980 aa16.71■□□□□ 0.27
FOXR1-202ENST00000531539 ADAMTS4O75173 837 aa16.71■□□□□ 0.27
FOXR1-202ENST00000531539 PTGS1P23219 599 aa16.71■□□□□ 0.27
FOXR1-202ENST00000531539 EDNRBP24530 442 aa16.71■□□□□ 0.27
FOXR1-202ENST00000531539 CDC27P30260 824 aa16.71■□□□□ 0.27
FOXR1-202ENST00000531539 ADD1P35611 737 aaKnown RBP16.71■□□□□ 0.27
FOXR1-202ENST00000531539 GJA9P57773 515 aa16.71■□□□□ 0.27
FOXR1-202ENST00000531539 STXBP2Q15833 593 aa16.71■□□□□ 0.27
FOXR1-202ENST00000531539 SLC39A5Q6ZMH5 540 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms