RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 RBM47A0AV96 593 aaKnown RBP17.01■□□□□ 0.31
CTSB-221ENST00000531502 TNFRSF10AO00220 468 aa17.01■□□□□ 0.31
CTSB-221ENST00000531502 NFIBO00712 420 aa17.01■□□□□ 0.31
CTSB-221ENST00000531502 RANBP6O60518 1105 aaKnown RBP17.01■□□□□ 0.31
CTSB-221ENST00000531502 SLC16A2P36021 539 aa17.01■□□□□ 0.31
CTSB-221ENST00000531502 ALDH5A1P51649 535 aaPredicted RBP17.01■□□□□ 0.31
CTSB-221ENST00000531502 PWP2Q15269 919 aaKnown RBP17.01■□□□□ 0.31
CTSB-221ENST00000531502 SCLYQ96I15 445 aa17.01■□□□□ 0.31
CTSB-221ENST00000531502 MTMR7Q9Y216 660 aa17.01■□□□□ 0.31
CTSB-221ENST00000531502 SCN10AQ9Y5Y9 1956 aa17■□□□□ 0.31
CTSB-221ENST00000531502 RABGGTBP53611 331 aa17■□□□□ 0.31
CTSB-221ENST00000531502 PURAQ00577 322 aaKnown RBP17■□□□□ 0.31
CTSB-221ENST00000531502 CCDC96Q2M329 555 aa17■□□□□ 0.31
CTSB-221ENST00000531502 SYDE2Q5VT97 1194 aa17■□□□□ 0.31
CTSB-221ENST00000531502 CLEC4DQ8WXI8 215 aa17■□□□□ 0.31
CTSB-221ENST00000531502 ASB2Q96Q27 587 aa17■□□□□ 0.31
CTSB-221ENST00000531502 TMEM47Q9BQJ4 181 aa17■□□□□ 0.31
CTSB-221ENST00000531502 WDR11Q9BZH6 1224 aa17■□□□□ 0.31
CTSB-221ENST00000531502 SLC28A3Q9HAS3 691 aa17■□□□□ 0.31
CTSB-221ENST00000531502 TRMT13Q9NUP7 481 aaKnown RBP17■□□□□ 0.31
CTSB-221ENST00000531502 THEGQ9P2T0 379 aa17■□□□□ 0.31
CTSB-221ENST00000531502 SCN5AQ14524 2016 aa16.99■□□□□ 0.31
CTSB-221ENST00000531502 MYOGP15173 224 aa16.99■□□□□ 0.31
CTSB-221ENST00000531502 CCDC85BQ15834 202 aaPredicted RBP16.99■□□□□ 0.31
CTSB-221ENST00000531502 RPUSD2Q8IZ73 545 aaKnown RBP16.99■□□□□ 0.31
CTSB-221ENST00000531502 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
CTSB-221ENST00000531502 POLR3EQ9NVU0 708 aa16.99■□□□□ 0.31
CTSB-221ENST00000531502 ADD3Q9UEY8 706 aaKnown RBP16.99■□□□□ 0.31
CTSB-221ENST00000531502 SLC4A7Q9Y6M7 1214 aa16.99■□□□□ 0.31
CTSB-221ENST00000531502 NCOR1O75376 2440 aa16.99■□□□□ 0.31
CTSB-221ENST00000531502 TNKSO95271 1327 aa16.98■□□□□ 0.31
CTSB-221ENST00000531502 FGAP02671 866 aa16.98■□□□□ 0.31
CTSB-221ENST00000531502 TOP1P11387 765 aaKnown RBP16.98■□□□□ 0.31
CTSB-221ENST00000531502 CYP2C9P11712 490 aa16.98■□□□□ 0.31
CTSB-221ENST00000531502 IGFBP4P22692 258 aa16.98■□□□□ 0.31
CTSB-221ENST00000531502 SLC30A10Q6XR72 485 aa16.98■□□□□ 0.31
CTSB-221ENST00000531502 EVI5LQ96CN4 794 aa16.98■□□□□ 0.31
CTSB-221ENST00000531502 HELLSQ9NRZ9 838 aa16.98■□□□□ 0.31
CTSB-221ENST00000531502 PCDHA11Q9Y5I1 949 aa16.98■□□□□ 0.31
CTSB-221ENST00000531502 REV3LO60673 3130 aa16.98■□□□□ 0.31
CTSB-221ENST00000531502 FRMPD2Q68DX3 1309 aaPredicted RBP16.97■□□□□ 0.31
CTSB-221ENST00000531502 PTPDC1A2A3K4 754 aa16.97■□□□□ 0.31
CTSB-221ENST00000531502 SUPT20HL2P0C7V6 817 aa16.97■□□□□ 0.31
CTSB-221ENST00000531502 PDHBP11177 359 aa16.97■□□□□ 0.31
CTSB-221ENST00000531502 EDNRBP24530 442 aa16.97■□□□□ 0.31
CTSB-221ENST00000531502 MRPS5P82675 430 aaKnown RBP16.97■□□□□ 0.31
CTSB-221ENST00000531502 TTLL4Q14679 1199 aa16.97■□□□□ 0.31
CTSB-221ENST00000531502 FAM227BQ96M60 508 aa16.97■□□□□ 0.31
CTSB-221ENST00000531502 GPCPD1Q9NPB8 672 aa16.97■□□□□ 0.31
CTSB-221ENST00000531502 A0A0D9SFI3 127 aa16.96■□□□□ 0.31
CTSB-221ENST00000531502 PFKMP08237 780 aa16.96■□□□□ 0.31
CTSB-221ENST00000531502 MYL3P08590 195 aa16.96■□□□□ 0.31
CTSB-221ENST00000531502 SNHG28P0DPA3 235 aa16.96■□□□□ 0.31
CTSB-221ENST00000531502 ATP2A2P16615 1042 aaKnown RBP16.96■□□□□ 0.31
CTSB-221ENST00000531502 CPT1AP50416 773 aa16.96■□□□□ 0.31
CTSB-221ENST00000531502 NBPF20Q3BBV1 942 aa16.96■□□□□ 0.31
CTSB-221ENST00000531502 PPP2R2DQ66LE6 453 aa16.96■□□□□ 0.31
CTSB-221ENST00000531502 OR6J1Q8NGC5 347 aa16.96■□□□□ 0.31
CTSB-221ENST00000531502 MTG1Q9BT17 334 aaPredicted RBP16.96■□□□□ 0.31
CTSB-221ENST00000531502 TRANK1O15050 2925 aa16.96■□□□□ 0.3
CTSB-221ENST00000531502 ZMYM6O95789 1325 aa16.96■□□□□ 0.3
CTSB-221ENST00000531502 A6NJR5 290 aa16.95■□□□□ 0.3
CTSB-221ENST00000531502 ZBBXA8MT70 800 aa16.95■□□□□ 0.3
CTSB-221ENST00000531502 HSPD1P10809 573 aaKnown RBP16.95■□□□□ 0.3
CTSB-221ENST00000531502 CALML3P27482 149 aa16.95■□□□□ 0.3
CTSB-221ENST00000531502 PDE1AP54750 535 aa16.95■□□□□ 0.3
CTSB-221ENST00000531502 RPS6P62753 249 aaKnown RBP16.95■□□□□ 0.3
CTSB-221ENST00000531502 ZNF543Q08ER8 600 aa16.95■□□□□ 0.3
CTSB-221ENST00000531502 RRP12Q5JTH9 1297 aaKnown RBP16.95■□□□□ 0.3
CTSB-221ENST00000531502 RNF207Q6ZRF8 634 aa16.95■□□□□ 0.3
CTSB-221ENST00000531502 ADAMTS19Q8TE59 1207 aa16.95■□□□□ 0.3
CTSB-221ENST00000531502 COPS5Q92905 334 aa16.95■□□□□ 0.3
CTSB-221ENST00000531502 TOMM22Q9NS69 142 aa16.95■□□□□ 0.3
CTSB-221ENST00000531502 WDR19Q8NEZ3 1342 aa16.95■□□□□ 0.3
CTSB-221ENST00000531502 TET1Q8NFU7 2136 aa16.94■□□□□ 0.3
CTSB-221ENST00000531502 NKRFO15226 690 aaKnown RBP eCLIP16.94■□□□□ 0.32e-7■■□□□ 14
CTSB-221ENST00000531502 POU3F3P20264 500 aaPredicted RBP16.94■□□□□ 0.3
CTSB-221ENST00000531502 MCMDC2Q4G0Z9 681 aa16.94■□□□□ 0.3
CTSB-221ENST00000531502 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
CTSB-221ENST00000531502 NFRKBQ6P4R8 1299 aa16.94■□□□□ 0.3
CTSB-221ENST00000531502 DEFB128Q7Z7B8 93 aa16.94■□□□□ 0.3
CTSB-221ENST00000531502 ZNF589Q86UQ0 364 aaPredicted RBP16.94■□□□□ 0.3
CTSB-221ENST00000531502 DNERQ8NFT8 737 aa16.94■□□□□ 0.3
CTSB-221ENST00000531502 PPP1R13LQ8WUF5 828 aa16.94■□□□□ 0.3
CTSB-221ENST00000531502 TTC14Q96N46 770 aa16.94■□□□□ 0.3
CTSB-221ENST00000531502 TANC1Q9C0D5 1861 aa16.94■□□□□ 0.3
CTSB-221ENST00000531502 BDP1A6H8Y1 2624 aa16.94■□□□□ 0.3
CTSB-221ENST00000531502 PRRC2BQ5JSZ5 2229 aaKnown RBP16.93■□□□□ 0.3
CTSB-221ENST00000531502 PITPNM1O00562 1244 aa16.93■□□□□ 0.3
CTSB-221ENST00000531502 ARIH2O95376 493 aa16.93■□□□□ 0.3
CTSB-221ENST00000531502 IQCF3P0C7M6 154 aa16.93■□□□□ 0.3
CTSB-221ENST00000531502 PDE4DQ08499 809 aa16.93■□□□□ 0.3
CTSB-221ENST00000531502 PPP2R5BQ15173 497 aa16.93■□□□□ 0.3
CTSB-221ENST00000531502 TICAM2Q86XR7 235 aa16.93■□□□□ 0.3
CTSB-221ENST00000531502 SCFD2Q8WU76 684 aa16.93■□□□□ 0.3
CTSB-221ENST00000531502 UHRF1Q96T88 793 aaPredicted RBP16.93■□□□□ 0.3
CTSB-221ENST00000531502 GPHNQ9NQX3 736 aaPredicted RBP16.93■□□□□ 0.3
CTSB-221ENST00000531502 PNMA2Q9UL42 364 aa16.93■□□□□ 0.3
CTSB-221ENST00000531502 TCF20Q9UGU0 1960 aaKnown RBP16.92■□□□□ 0.3
CTSB-221ENST00000531502 RFXAPO00287 272 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms