RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ACAD9Q9H845 621 aa21.81■■□□□ 1.08
SMPD1-205ENST00000531303 CCDC194A0A1B0GVG4 234 aa21.8■■□□□ 1.08
SMPD1-205ENST00000531303 M0R2N6 131 aa21.8■■□□□ 1.08
SMPD1-205ENST00000531303 MEIS2O14770 477 aa21.8■■□□□ 1.08
SMPD1-205ENST00000531303 ERCC3P19447 782 aa21.8■■□□□ 1.08
SMPD1-205ENST00000531303 TNPO1Q92973 898 aaKnown RBP21.8■■□□□ 1.08
SMPD1-205ENST00000531303 TNFRSF25Q93038 417 aa21.8■■□□□ 1.08
SMPD1-205ENST00000531303 SLC25A27O95847 323 aa21.79■■□□□ 1.08
SMPD1-205ENST00000531303 ATP2B1P20020 1258 aa21.79■■□□□ 1.08
SMPD1-205ENST00000531303 MAP2K2P36507 400 aa21.79■■□□□ 1.08
SMPD1-205ENST00000531303 CCNA1P78396 465 aa21.79■■□□□ 1.08
SMPD1-205ENST00000531303 BRAPQ7Z569 592 aa21.79■■□□□ 1.08
SMPD1-205ENST00000531303 CCAR1Q8IX12 1150 aaKnown RBP21.79■■□□□ 1.08
SMPD1-205ENST00000531303 REM2Q8IYK8 340 aaPredicted RBP21.79■■□□□ 1.08
SMPD1-205ENST00000531303 CHST13Q8NET6 341 aa21.79■■□□□ 1.08
SMPD1-205ENST00000531303 PORCNQ9H237 461 aa21.79■■□□□ 1.08
SMPD1-205ENST00000531303 MORF4L1Q9UBU8 362 aa21.79■■□□□ 1.08
SMPD1-205ENST00000531303 RBBP6Q7Z6E9 1792 aaKnown RBP21.79■■□□□ 1.08
SMPD1-205ENST00000531303 ADGRA2Q96PE1 1338 aa21.78■■□□□ 1.08
SMPD1-205ENST00000531303 BAATQ14032 418 aaPredicted RBP21.78■■□□□ 1.08
SMPD1-205ENST00000531303 SLC30A10Q6XR72 485 aa21.78■■□□□ 1.08
SMPD1-205ENST00000531303 RNF207Q6ZRF8 634 aa21.78■■□□□ 1.08
SMPD1-205ENST00000531303 EFCC1Q9HA90 598 aa21.78■■□□□ 1.08
SMPD1-205ENST00000531303 TCHHQ07283 1943 aa21.78■■□□□ 1.08
SMPD1-205ENST00000531303 MYH15Q9Y2K3 1946 aa21.78■■□□□ 1.08
SMPD1-205ENST00000531303 CA12O43570 354 aa21.77■■□□□ 1.08
SMPD1-205ENST00000531303 TLR2O60603 784 aa21.77■■□□□ 1.08
SMPD1-205ENST00000531303 ALDH1A1P00352 501 aa21.77■■□□□ 1.08
SMPD1-205ENST00000531303 CLK2P49760 499 aaKnown RBP21.77■■□□□ 1.08
SMPD1-205ENST00000531303 RPS6P62753 249 aaKnown RBP21.77■■□□□ 1.08
SMPD1-205ENST00000531303 KRT25Q7Z3Z0 450 aa21.77■■□□□ 1.08
SMPD1-205ENST00000531303 ANKRD35Q8N283 1001 aa21.77■■□□□ 1.08
SMPD1-205ENST00000531303 SPDYE3A6NKU9 549 aa21.77■■□□□ 1.07
SMPD1-205ENST00000531303 PIK3CDO00329 1044 aa21.77■■□□□ 1.07
SMPD1-205ENST00000531303 FAM110CQ1W6H9 321 aa21.77■■□□□ 1.07
SMPD1-205ENST00000531303 INF2Q27J81 1249 aa21.77■■□□□ 1.07
SMPD1-205ENST00000531303 A1CFQ9NQ94 594 aaKnown RBP21.77■■□□□ 1.07
SMPD1-205ENST00000531303 FBXO40Q9UH90 709 aa21.77■■□□□ 1.07
SMPD1-205ENST00000531303 ATP6V1DQ9Y5K8 247 aa21.77■■□□□ 1.07
SMPD1-205ENST00000531303 TBC1D8O95759 1140 aa21.76■■□□□ 1.07
SMPD1-205ENST00000531303 BCRP11274 1271 aa21.76■■□□□ 1.07
SMPD1-205ENST00000531303 NCLP19338 710 aaKnown RBP21.76■■□□□ 1.07
SMPD1-205ENST00000531303 COPB2P35606 906 aa21.76■■□□□ 1.07
SMPD1-205ENST00000531303 HSD17B4P51659 736 aa21.76■■□□□ 1.07
SMPD1-205ENST00000531303 DNM1Q05193 864 aaKnown RBP21.76■■□□□ 1.07
SMPD1-205ENST00000531303 NONOQ15233 471 aaKnown RBP eCLIP21.76■■□□□ 1.07
SMPD1-205ENST00000531303 MYSM1Q5VVJ2 828 aa21.76■■□□□ 1.07
SMPD1-205ENST00000531303 C17orf99Q6UX52 265 aa21.76■■□□□ 1.07
SMPD1-205ENST00000531303 SYTL5Q8TDW5 730 aaPredicted RBP21.76■■□□□ 1.07
SMPD1-205ENST00000531303 PURBQ96QR8 312 aaKnown RBP21.76■■□□□ 1.07
SMPD1-205ENST00000531303 ANO3Q9BYT9 981 aa21.76■■□□□ 1.07
SMPD1-205ENST00000531303 MROH8Q9H579 483 aa21.76■■□□□ 1.07
SMPD1-205ENST00000531303 COL20A1Q9P218 1284 aa21.76■■□□□ 1.07
SMPD1-205ENST00000531303 TFIP11Q9UBB9 837 aaKnown RBP21.76■■□□□ 1.07
SMPD1-205ENST00000531303 MYH7BA7E2Y1 1941 aa21.75■■□□□ 1.07
SMPD1-205ENST00000531303 ZNFX1Q9P2E3 1918 aaKnown RBP21.75■■□□□ 1.07
SMPD1-205ENST00000531303 TRPA1O75762 1119 aa21.75■■□□□ 1.07
SMPD1-205ENST00000531303 CEBPZQ03701 1054 aaKnown RBP21.75■■□□□ 1.07
SMPD1-205ENST00000531303 NBR1Q14596 966 aa21.75■■□□□ 1.07
SMPD1-205ENST00000531303 SHCBP1Q8NEM2 672 aa21.75■■□□□ 1.07
SMPD1-205ENST00000531303 CYP39A1Q9NYL5 469 aa21.75■■□□□ 1.07
SMPD1-205ENST00000531303 UBXN2AP68543 259 aa21.74■■□□□ 1.07
SMPD1-205ENST00000531303 AP3B2Q13367 1082 aa21.74■■□□□ 1.07
SMPD1-205ENST00000531303 TBCKQ8TEA7 893 aa21.74■■□□□ 1.07
SMPD1-205ENST00000531303 TAAR1Q96RJ0 339 aa21.74■■□□□ 1.07
SMPD1-205ENST00000531303 MMP19Q99542 508 aa21.74■■□□□ 1.07
SMPD1-205ENST00000531303 FTOQ9C0B1 505 aaKnown RBP eCLIP21.74■■□□□ 1.07
SMPD1-205ENST00000531303 RNF186Q9NXI6 227 aa21.74■■□□□ 1.07
SMPD1-205ENST00000531303 NOL7Q9UMY1 257 aaKnown RBP21.74■■□□□ 1.07
SMPD1-205ENST00000531303 FOSP01100 380 aaPredicted RBP21.73■■□□□ 1.07
SMPD1-205ENST00000531303 TOB1P50616 345 aaPredicted RBP21.73■■□□□ 1.07
SMPD1-205ENST00000531303 KCTD2Q14681 263 aa21.73■■□□□ 1.07
SMPD1-205ENST00000531303 ZNF396Q96N95 335 aaPredicted RBP21.73■■□□□ 1.07
SMPD1-205ENST00000531303 FCER1AP12319 257 aa21.72■■□□□ 1.07
SMPD1-205ENST00000531303 SAMD3Q8N6K7 520 aa21.72■■□□□ 1.07
SMPD1-205ENST00000531303 PLXNB2O15031 1838 aa21.72■■□□□ 1.07
SMPD1-205ENST00000531303 PFASO15067 1338 aa21.72■■□□□ 1.07
SMPD1-205ENST00000531303 WNT7AO00755 349 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 PGK2P07205 417 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 CNTN2Q02246 1040 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 GHRHRQ02643 423 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 ZNF174Q15697 407 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 LETM2Q2VYF4 491 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 RILPL1Q5EBL4 403 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 MCTP2Q6DN12 878 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 USP28Q96RU2 1077 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 RMDN3Q96TC7 470 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 MAP3K20Q9NYL2 800 aaKnown RBP21.71■■□□□ 1.07
SMPD1-205ENST00000531303 CNPY2Q9Y2B0 182 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 DOCK3Q8IZD9 2030 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 POTEB2H3BUK9 544 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 BAG4O95429 457 aaKnown RBP21.71■■□□□ 1.07
SMPD1-205ENST00000531303 EIF2AK2P19525 551 aaKnown RBP21.71■■□□□ 1.07
SMPD1-205ENST00000531303 TTC38Q5R3I4 469 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 GPR142Q7Z601 462 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 PLEKHH3Q7Z736 793 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 NEK8Q86SG6 692 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 TEX2Q8IWB9 1127 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 EHMT1Q9H9B1 1298 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 PCDHB6Q9Y5E3 794 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms