RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	SH3GLB2	Q9NR46	395 aa		24.52	■■□□□ 1.52
PABPC4-225	ENST00000531243	CYP39A1	Q9NYL5	469 aa		24.52	■■□□□ 1.52
PABPC4-225	ENST00000531243	ORC3	Q9UBD5	711 aa	Predicted RBP	24.52	■■□□□ 1.52
PABPC4-225	ENST00000531243	GABRQ	Q9UN88	632 aa		24.52	■■□□□ 1.52
PABPC4-225	ENST00000531243	KIF3A	Q9Y496	699 aa		24.52	■■□□□ 1.52
PABPC4-225	ENST00000531243	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	24.52	■■□□□ 1.52
PABPC4-225	ENST00000531243		B4DLN1	442 aa		24.51	■■□□□ 1.51
PABPC4-225	ENST00000531243	GCOM1	H8Y6P7	765 aa	Predicted RBP	24.51	■■□□□ 1.51
PABPC4-225	ENST00000531243	POLR2M	P0CAP2	368 aa		24.51	■■□□□ 1.51
PABPC4-225	ENST00000531243	MRPL12	P52815	198 aa	Known RBP	24.51	■■□□□ 1.51
PABPC4-225	ENST00000531243	PKN1	Q16512	942 aa		24.51	■■□□□ 1.51
PABPC4-225	ENST00000531243	PXYLP1	Q8TE99	480 aa		24.51	■■□□□ 1.51
PABPC4-225	ENST00000531243	USP6NL	Q92738	828 aa		24.51	■■□□□ 1.51
PABPC4-225	ENST00000531243	ADD3	Q9UEY8	706 aa	Known RBP	24.51	■■□□□ 1.51
PABPC4-225	ENST00000531243		K7ELQ4	463 aa	Predicted RBP	24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	PPFIA3	O75145	1194 aa		24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	CTDNEP1	O95476	244 aa		24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	TAL1	P17542	331 aa	Predicted RBP	24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	CALML3	P27482	149 aa		24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	GNA11	P29992	359 aa		24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	RPS6	P62753	249 aa	Known RBP	24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	CAP1	Q01518	475 aa		24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	BAAT	Q14032	418 aa	Predicted RBP	24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	FBXO46	Q6PJ61	603 aa	Predicted RBP	24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	SLAIN1	Q8ND83	568 aa		24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	SMARCC2	Q8TAQ2	1214 aa		24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	PSTPIP2	Q9H939	334 aa		24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	C6orf50	Q9HD87	102 aa		24.5	■■□□□ 1.51
PABPC4-225	ENST00000531243	STXBP3	O00186	592 aa		24.49	■■□□□ 1.51
PABPC4-225	ENST00000531243	PGK2	P07205	417 aa		24.49	■■□□□ 1.51
PABPC4-225	ENST00000531243	GHRHR	Q02643	423 aa		24.49	■■□□□ 1.51
PABPC4-225	ENST00000531243	FAM184A	Q8NB25	1140 aa		24.49	■■□□□ 1.51
PABPC4-225	ENST00000531243	DNAJC25-GNG10	A0A024R161	153 aa		24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	LOC102724159	A0A0B4J2E5	919 aa		24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	ESYT2	A0FGR8	921 aa		24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	SMCO2	A6NFE2	343 aa		24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	ADCY3	O60266	1144 aa		24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	COBL	O75128	1261 aa		24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	HSD17B4	P51659	736 aa		24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	ADCY7	P51828	1080 aa		24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	PWP2	Q15269	919 aa	Known RBP	24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	ZNF792	Q3KQV3	632 aa		24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	MSL3	Q8N5Y2	521 aa	Known RBP	24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	DNER	Q8NFT8	737 aa		24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	BICD2	Q8TD16	824 aa		24.48	■■□□□ 1.51
PABPC4-225	ENST00000531243	TRIM29	Q14134	588 aa		24.47	■■□□□ 1.51
PABPC4-225	ENST00000531243	OLFML2B	Q68BL8	750 aa		24.47	■■□□□ 1.51
PABPC4-225	ENST00000531243	MCTP2	Q6DN12	878 aa		24.47	■■□□□ 1.51
PABPC4-225	ENST00000531243	ZNF467	Q7Z7K2	595 aa	Predicted RBP	24.47	■■□□□ 1.51
PABPC4-225	ENST00000531243	FAM133A	Q8N9E0	248 aa		24.47	■■□□□ 1.51
PABPC4-225	ENST00000531243	ALG1	Q9BT22	464 aa		24.47	■■□□□ 1.51
PABPC4-225	ENST00000531243	RIC8A	Q9NPQ8	531 aa		24.47	■■□□□ 1.51
PABPC4-225	ENST00000531243	PTCH2	Q9Y6C5	1203 aa		24.47	■■□□□ 1.51
PABPC4-225	ENST00000531243	LCT	P09848	1927 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	ASB14	A6NK59	587 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	PIK3CD	O00329	1044 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	GRK4	P32298	578 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	NLRP5	P59047	1200 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	ST3GAL1	Q11201	340 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	MFSD14C	Q5VZR4	134 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	GALNT17	Q6IS24	598 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	SLC30A10	Q6XR72	485 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	NPLOC4	Q8TAT6	608 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	MAML3	Q96JK9	1138 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	ZMYND12	Q9H0C1	365 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	EHMT1	Q9H9B1	1298 aa		24.46	■■□□□ 1.51
PABPC4-225	ENST00000531243	OPLAH	O14841	1288 aa		24.45	■■□□□ 1.5
PABPC4-225	ENST00000531243	SLC9C1	Q4G0N8	1177 aa		24.45	■■□□□ 1.5
PABPC4-225	ENST00000531243	SYTL5	Q8TDW5	730 aa	Predicted RBP	24.45	■■□□□ 1.5
PABPC4-225	ENST00000531243	VPS54	Q9P1Q0	977 aa		24.45	■■□□□ 1.5
PABPC4-225	ENST00000531243	SMC3	Q9UQE7	1217 aa		24.45	■■□□□ 1.5
PABPC4-225	ENST00000531243	SPDYE3	A6NKU9	549 aa		24.44	■■□□□ 1.5
PABPC4-225	ENST00000531243	JAK2	O60674	1132 aa		24.44	■■□□□ 1.5
PABPC4-225	ENST00000531243	HMGCR	P04035	888 aa		24.44	■■□□□ 1.5
PABPC4-225	ENST00000531243	UBXN2A	P68543	259 aa		24.44	■■□□□ 1.5
PABPC4-225	ENST00000531243	CNTN2	Q02246	1040 aa		24.44	■■□□□ 1.5
PABPC4-225	ENST00000531243	NSUN6	Q8TEA1	469 aa	Known RBP	24.44	■■□□□ 1.5
PABPC4-225	ENST00000531243	TBC1D5	Q92609	795 aa		24.44	■■□□□ 1.5
PABPC4-225	ENST00000531243	BRMS1	Q9HCU9	246 aa		24.44	■■□□□ 1.5
PABPC4-225	ENST00000531243	BIN2	Q9UBW5	565 aa	Predicted RBP	24.44	■■□□□ 1.5
PABPC4-225	ENST00000531243	FOS	P01100	380 aa	Predicted RBP	24.43	■■□□□ 1.5
PABPC4-225	ENST00000531243	HSP90AA1	P07900	732 aa	Known RBP	24.43	■■□□□ 1.5
PABPC4-225	ENST00000531243	FDPS	P14324	419 aa	Known RBP	24.43	■■□□□ 1.5
PABPC4-225	ENST00000531243	HOXA13	P31271	388 aa	Predicted RBP	24.43	■■□□□ 1.5
PABPC4-225	ENST00000531243	CUL4A	Q13619	759 aa		24.43	■■□□□ 1.5
PABPC4-225	ENST00000531243	BECN1	Q14457	450 aa		24.43	■■□□□ 1.5
PABPC4-225	ENST00000531243	ARHGEF16	Q5VV41	709 aa		24.43	■■□□□ 1.5
PABPC4-225	ENST00000531243	INTS4	Q96HW7	963 aa	Known RBP	24.43	■■□□□ 1.5
PABPC4-225	ENST00000531243	RMDN3	Q96TC7	470 aa		24.43	■■□□□ 1.5
PABPC4-225	ENST00000531243	TINF2	Q9BSI4	451 aa		24.43	■■□□□ 1.5
PABPC4-225	ENST00000531243	SYNGAP1	Q96PV0	1343 aa		24.42	■■□□□ 1.5
PABPC4-225	ENST00000531243	MCM3AP	O60318	1980 aa		24.42	■■□□□ 1.5
PABPC4-225	ENST00000531243	MEIS2	O14770	477 aa		24.42	■■□□□ 1.5
PABPC4-225	ENST00000531243	ALDH5A1	P51649	535 aa	Predicted RBP	24.42	■■□□□ 1.5
PABPC4-225	ENST00000531243	AP3B2	Q13367	1082 aa		24.42	■■□□□ 1.5
PABPC4-225	ENST00000531243	TYW1B	Q6NUM6	668 aa		24.42	■■□□□ 1.5
PABPC4-225	ENST00000531243	USP17L6P	Q6QN14	398 aa		24.42	■■□□□ 1.5
PABPC4-225	ENST00000531243	MAMDC4	Q6UXC1	1216 aa		24.42	■■□□□ 1.5
PABPC4-225	ENST00000531243	FCHSD1	Q86WN1	690 aa		24.42	■■□□□ 1.5
PABPC4-225	ENST00000531243	IWS1	Q96ST2	819 aa		24.42	■■□□□ 1.5

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms