RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 PRPF38AQ8NAV1 312 aaKnown RBP11.28□□□□□ -0.6
CTNND1-228ENST00000531007 LEO1Q8WVC0 666 aaPredicted RBP11.28□□□□□ -0.6
CTNND1-228ENST00000531007 CUL5Q93034 780 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 NAP1L4Q99733 375 aaKnown RBP11.28□□□□□ -0.6
CTNND1-228ENST00000531007 RANBP17Q9H2T7 1088 aaKnown RBP11.28□□□□□ -0.6
CTNND1-228ENST00000531007 VAT1LQ9HCJ6 419 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 RIC8AQ9NPQ8 531 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 TMOD4Q9NZQ9 345 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 PRR12Q9ULL5 1215 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 DDX49Q9Y6V7 483 aaKnown RBP11.28□□□□□ -0.6
CTNND1-228ENST00000531007 ZHX2Q9Y6X8 837 aa11.28□□□□□ -0.6
CTNND1-228ENST00000531007 POLR2AP24928 1970 aaKnown RBP11.27□□□□□ -0.61
CTNND1-228ENST00000531007 hCG_1642624A0A1W2PR95 340 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 UBE2Q2LH0YL09 131 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 M0R2N6 131 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 DTNBO60941 627 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 SPP2Q13103 211 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 SLC39A14Q15043 492 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 STK38Q15208 465 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 SF3A1Q15459 793 aaKnown RBP11.27□□□□□ -0.61
CTNND1-228ENST00000531007 NPY5RQ15761 445 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 QRICH1Q2TAL8 776 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 ERO1BQ86YB8 467 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 REXO1Q8N1G1 1221 aaKnown RBP11.27□□□□□ -0.61
CTNND1-228ENST00000531007 LINC00301Q8NCQ3 95 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 TNFRSF25Q93038 417 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 ZKSCAN4Q969J2 545 aaPredicted RBP11.27□□□□□ -0.61
CTNND1-228ENST00000531007 USP28Q96RU2 1077 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 SLF1Q9BQI6 1058 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 RRAGCQ9HB90 399 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 NMRK2Q9NPI5 230 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 GJB4Q9NTQ9 266 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 MAP3K20Q9NYL2 800 aaKnown RBP11.27□□□□□ -0.61
CTNND1-228ENST00000531007 TSR3Q9UJK0 312 aaKnown RBP11.27□□□□□ -0.61
CTNND1-228ENST00000531007 SCAF8Q9UPN6 1271 aaKnown RBP11.27□□□□□ -0.61
CTNND1-228ENST00000531007 AFG3L2Q9Y4W6 797 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 PCDHA1Q9Y5I3 950 aa11.27□□□□□ -0.61
CTNND1-228ENST00000531007 PAPPA2Q9BXP8 1791 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 A0A1W2PQ27 194 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 A0A1W2PQ64 194 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 A0A1W2PQD8 194 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 SPDYE5A6NIY4 337 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 TRIM75PA6NK02 468 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 PIK3CDO00329 1044 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 LAD1O00515 517 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 SPTLC2O15270 562 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 FOSP01100 380 aaPredicted RBP11.26□□□□□ -0.61
CTNND1-228ENST00000531007 SLC16A2P36021 539 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 OAZ1P54368 228 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 PPIL2Q13356 520 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 AP3B2Q13367 1082 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 MTMR2Q13614 643 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 VGLL4Q14135 290 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
CTNND1-228ENST00000531007 PRAMEF18Q5VWM3 479 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 ADALQ6DHV7 355 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
CTNND1-228ENST00000531007 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.26□□□□□ -0.61
CTNND1-228ENST00000531007 SPICE1Q8N0Z3 855 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 PROCA1Q8NCQ7 364 aaPredicted RBP11.26□□□□□ -0.61
CTNND1-228ENST00000531007 PIBF1Q8WXW3 757 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.61
CTNND1-228ENST00000531007 HOXC10Q9NYD6 342 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 TFIP11Q9UBB9 837 aaKnown RBP11.26□□□□□ -0.61
CTNND1-228ENST00000531007 MRPL11Q9Y3B7 192 aaKnown RBP11.26□□□□□ -0.61
CTNND1-228ENST00000531007 SNCAIPQ9Y6H5 919 aa11.26□□□□□ -0.61
CTNND1-228ENST00000531007 LETM1O95202 739 aaPredicted RBP11.25□□□□□ -0.61
CTNND1-228ENST00000531007 VCAM1P19320 739 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 C1QTNF8P60827 252 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 NR5A1Q13285 461 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 PABPC4Q13310 644 aaKnown RBP eCLIP11.25□□□□□ -0.61
CTNND1-228ENST00000531007 TTLL12Q14166 644 aaPredicted RBP11.25□□□□□ -0.61
CTNND1-228ENST00000531007 NONOQ15233 471 aaKnown RBP eCLIP11.25□□□□□ -0.61
CTNND1-228ENST00000531007 LDLRAD1Q5T700 205 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 ARL6IP4Q66PJ3 421 aaKnown RBP11.25□□□□□ -0.61
CTNND1-228ENST00000531007 FAM173BQ6P4H8 233 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 RASGRP2Q7LDG7 609 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 SHISA4Q96DD7 197 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 NUP88Q99567 741 aaPredicted RBP11.25□□□□□ -0.61
CTNND1-228ENST00000531007 GLIS2Q9BZE0 524 aaPredicted RBP11.25□□□□□ -0.61
CTNND1-228ENST00000531007 CPVLQ9H3G5 476 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 PSTPIP2Q9H939 334 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 WBP1LQ9NX94 342 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 PPP1R9AQ9ULJ8 1098 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 PCDHA6Q9UN73 950 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 PCDHA8Q9Y5H6 950 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 ABCB11O95342 1321 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 TCHHQ07283 1943 aa11.25□□□□□ -0.61
CTNND1-228ENST00000531007 PHIPQ8WWQ0 1821 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 USP17L15C9J2P7 530 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 USP17L13C9JLJ4 530 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 USP17L11C9JVI0 530 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 USP17L18D6R9N7 530 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 USP17L22D6RA61 530 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 USP17L17D6RBQ6 530 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 USP17L19D6RCP7 530 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 USP17L20D6RJB6 530 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 ZBED4O75132 1171 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 ICAM1P05362 532 aa11.24□□□□□ -0.61
CTNND1-228ENST00000531007 HOXA7P31268 230 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms