RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ADCY5O95622 1261 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 LDHBP07195 334 aaKnown RBP6.39□□□□□ -1.39
PCF11-205ENST00000530906 CDC27P30260 824 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 KIF5BP33176 963 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 DGKGP49619 791 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 ZNF165P49910 485 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 GNAQP50148 359 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 SMTNP53814 917 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 TPM4P67936 248 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 IFIT1BQ5T764 474 aaKnown RBP6.39□□□□□ -1.39
PCF11-205ENST00000530906 DGKHQ86XP1 1220 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 CRACR2BQ8N4Y2 399 aaPredicted RBP6.39□□□□□ -1.39
PCF11-205ENST00000530906 MIGA1Q8NAN2 632 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 ANKS1AQ92625 1134 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 PYM1Q9BRP8 204 aaKnown RBP6.39□□□□□ -1.39
PCF11-205ENST00000530906 SLC26A6Q9BXS9 759 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 DCP1AQ9NPI6 582 aaPredicted RBP6.39□□□□□ -1.39
PCF11-205ENST00000530906 TCP11L1Q9NUJ3 509 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 ANKIB1Q9P2G1 1089 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 KLF15Q9UIH9 416 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 TNKSO95271 1327 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 NRXN2Q9P2S2 1712 aa6.39□□□□□ -1.39
PCF11-205ENST00000530906 SMTNL1A8MU46 457 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 MINDY4BA8MYZ0 360 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 TMEM229AB2RXF0 380 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 GNB5O14775 395 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 RANBP6O60518 1105 aaKnown RBP6.38□□□□□ -1.39
PCF11-205ENST00000530906 OFD1O75665 1012 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 GYS1P13807 737 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 IL1R1P14778 569 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 AMPD1P23109 780 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 CALML3P27482 149 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 TRAPPC10P48553 1259 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 GRIN2CQ14957 1233 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 PTPAQ15257 358 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 MAP7D1Q3KQU3 841 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 ANO6Q4KMQ2 910 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 CT47A1Q5JQC4 288 aaPredicted RBP6.38□□□□□ -1.39
PCF11-205ENST00000530906 RRP12Q5JTH9 1297 aaKnown RBP6.38□□□□□ -1.39
PCF11-205ENST00000530906 AXDND1Q5T1B0 1012 aaPredicted RBP6.38□□□□□ -1.39
PCF11-205ENST00000530906 GALNT17Q6IS24 598 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 PRR5LQ6MZQ0 368 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 CTR9Q6PD62 1173 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 KRT27Q7Z3Y8 459 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 ADGRA1Q86SQ6 560 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 NBPF11Q86T75 865 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 NLGN1Q8N2Q7 840 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 ENAHQ8N8S7 591 aaPredicted RBP6.38□□□□□ -1.39
PCF11-205ENST00000530906 CTCFLQ8NI51 663 aaPredicted RBP6.38□□□□□ -1.39
PCF11-205ENST00000530906 MRFAP1L1Q96HT8 127 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 LZTS2Q9BRK4 669 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 SDF4Q9BRK5 362 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 NIFKQ9BYG3 293 aaKnown RBP6.38□□□□□ -1.39
PCF11-205ENST00000530906 CBX8Q9HC52 389 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 PRM3Q9NNZ6 103 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 SH3GLB2Q9NR46 395 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 IQSEC3Q9UPP2 1182 aaPredicted RBP6.38□□□□□ -1.39
PCF11-205ENST00000530906 HPSEQ9Y251 543 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 FAM205AQ6ZU69 1335 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 C10orf71Q711Q0 1435 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 LTBP1Q14766 1721 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 NAV1Q8NEY1 1877 aa6.38□□□□□ -1.39
PCF11-205ENST00000530906 BAZ2AQ9UIF9 1905 aaKnown RBP6.38□□□□□ -1.39
PCF11-205ENST00000530906 MYH2Q9UKX2 1941 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 DDX60LQ5H9U9 1706 aaKnown RBP6.37□□□□□ -1.39
PCF11-205ENST00000530906 MROH7-TTC4A0A0A0MT08 1334 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 MYO3BQ8WXR4 1341 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 BECN2A8MW95 431 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 KIF28PB7ZC32 967 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 USP17L12C9JPN9 530 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 USP17L21D6R901 530 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 IKBKBO14920 756 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 PLSCR1O15162 318 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 ATXN7O15265 892 aaPredicted RBP6.37□□□□□ -1.39
PCF11-205ENST00000530906 ZNF202O95125 648 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 SERPINB2P05120 415 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 POLR3DP05423 398 aaPredicted RBP6.37□□□□□ -1.39
PCF11-205ENST00000530906 TPM2P07951 284 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 SMARCA1P28370 1054 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 PRDX5P30044 214 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 SYKP43405 635 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 GUCY1B3Q02153 619 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 CEBPZQ03701 1054 aaKnown RBP6.37□□□□□ -1.39
PCF11-205ENST00000530906 TNP2Q05952 138 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 TROAPQ12815 778 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 SEMA3FQ13275 785 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 MTFR1Q15390 333 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 CAMK4Q16566 473 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 FAM182BQ5T319 152 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 C12orf60Q5U649 245 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 RESP18Q5W5W9 173 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 TMTC3Q6ZXV5 915 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 SP8Q8IXZ3 490 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 CKAP2LQ8IYA6 745 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 DIS3L2Q8IYB7 885 aaKnown RBP6.37□□□□□ -1.39
PCF11-205ENST00000530906 TRIML1Q8N9V2 468 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 PLPP7Q8NBV4 271 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 ZNF384Q8TF68 577 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 SDR42E1Q8WUS8 393 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 PHKBQ93100 1093 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms