RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 ZNF792Q3KQV3 632 aa18.5■□□□□ 0.55
BRK1-201ENST00000530758 WWC2Q6AWC2 1192 aa18.5■□□□□ 0.55
BRK1-201ENST00000530758 FAM133AQ8N9E0 248 aa18.5■□□□□ 0.55
BRK1-201ENST00000530758 CWC22Q9HCG8 908 aaKnown RBP18.5■□□□□ 0.55
BRK1-201ENST00000530758 SH3GLB2Q9NR46 395 aa18.5■□□□□ 0.55
BRK1-201ENST00000530758 PIK3CDO00329 1044 aa18.49■□□□□ 0.55
BRK1-201ENST00000530758 HSD17B4P51659 736 aa18.49■□□□□ 0.55
BRK1-201ENST00000530758 TYW1BQ6NUM6 668 aa18.49■□□□□ 0.55
BRK1-201ENST00000530758 RNF207Q6ZRF8 634 aa18.49■□□□□ 0.55
BRK1-201ENST00000530758 ZNF467Q7Z7K2 595 aaPredicted RBP18.49■□□□□ 0.55
BRK1-201ENST00000530758 CCDC83Q8IWF9 413 aa18.49■□□□□ 0.55
BRK1-201ENST00000530758 PXYLP1Q8TE99 480 aa18.49■□□□□ 0.55
BRK1-201ENST00000530758 TBC1D5Q92609 795 aa18.49■□□□□ 0.55
BRK1-201ENST00000530758 DDX11Q96FC9 970 aa18.49■□□□□ 0.55
BRK1-201ENST00000530758 SLC5A4Q9NY91 659 aa18.49■□□□□ 0.55
BRK1-201ENST00000530758 LOC102724159A0A0B4J2E5 919 aa18.48■□□□□ 0.55
BRK1-201ENST00000530758 ESYT2A0FGR8 921 aa18.48■□□□□ 0.55
BRK1-201ENST00000530758 RPS6P62753 249 aaKnown RBP18.48■□□□□ 0.55
BRK1-201ENST00000530758 BAATQ14032 418 aaPredicted RBP18.48■□□□□ 0.55
BRK1-201ENST00000530758 PWP2Q15269 919 aaKnown RBP18.48■□□□□ 0.55
BRK1-201ENST00000530758 HEATR3Q7Z4Q2 680 aa18.48■□□□□ 0.55
BRK1-201ENST00000530758 DPP9Q86TI2 863 aa18.48■□□□□ 0.55
BRK1-201ENST00000530758 TRMT44Q8IYL2 757 aaKnown RBP18.48■□□□□ 0.55
BRK1-201ENST00000530758 GPKOWQ92917 476 aaPredicted RBP eCLIP18.48■□□□□ 0.55
BRK1-201ENST00000530758 ZMYND12Q9H0C1 365 aa18.48■□□□□ 0.55
BRK1-201ENST00000530758 PTPDC1A2A3K4 754 aa18.47■□□□□ 0.55
BRK1-201ENST00000530758 ECM2O94769 699 aaPredicted RBP18.47■□□□□ 0.55
BRK1-201ENST00000530758 OLFML2BQ68BL8 750 aa18.47■□□□□ 0.55
BRK1-201ENST00000530758 NSMFQ6X4W1 530 aa18.47■□□□□ 0.55
BRK1-201ENST00000530758 MSL3Q8N5Y2 521 aaKnown RBP18.47■□□□□ 0.55
BRK1-201ENST00000530758 NPLOC4Q8TAT6 608 aa18.47■□□□□ 0.55
BRK1-201ENST00000530758 CCDC12Q8WUD4 166 aaPredicted RBP18.47■□□□□ 0.55
BRK1-201ENST00000530758 WASF1Q92558 559 aa18.47■□□□□ 0.55
BRK1-201ENST00000530758 FGD4Q96M96 766 aa18.47■□□□□ 0.55
BRK1-201ENST00000530758 APBA2Q99767 749 aa18.47■□□□□ 0.55
BRK1-201ENST00000530758 GLT8D2Q9H1C3 349 aa18.47■□□□□ 0.55
BRK1-201ENST00000530758 ORC3Q9UBD5 711 aaPredicted RBP18.47■□□□□ 0.55
BRK1-201ENST00000530758 POTEB2H3BUK9 544 aa18.46■□□□□ 0.55
BRK1-201ENST00000530758 K7ELQ4 463 aaPredicted RBP18.46■□□□□ 0.55
BRK1-201ENST00000530758 MEIS2O14770 477 aa18.46■□□□□ 0.55
BRK1-201ENST00000530758 PGK2P07205 417 aa18.46■□□□□ 0.55
BRK1-201ENST00000530758 CYP2B6P20813 491 aa18.46■□□□□ 0.55
BRK1-201ENST00000530758 HMGN5P82970 282 aaKnown RBP18.46■□□□□ 0.55
BRK1-201ENST00000530758 MAMDC4Q6UXC1 1216 aa18.46■□□□□ 0.55
BRK1-201ENST00000530758 DNERQ8NFT8 737 aa18.46■□□□□ 0.55
BRK1-201ENST00000530758 SYTL5Q8TDW5 730 aaPredicted RBP18.46■□□□□ 0.55
BRK1-201ENST00000530758 SHISA4Q96DD7 197 aa18.46■□□□□ 0.55
BRK1-201ENST00000530758 MAML3Q96JK9 1138 aa18.46■□□□□ 0.55
BRK1-201ENST00000530758 PSTPIP2Q9H939 334 aa18.46■□□□□ 0.55
BRK1-201ENST00000530758 RIC8AQ9NPQ8 531 aa18.46■□□□□ 0.55
BRK1-201ENST00000530758 PTCH2Q9Y6C5 1203 aa18.46■□□□□ 0.55
BRK1-201ENST00000530758 SOWAHBA6NEL2 793 aa18.45■□□□□ 0.54
BRK1-201ENST00000530758 SMCO2A6NFE2 343 aa18.45■□□□□ 0.54
BRK1-201ENST00000530758 GCOM1H8Y6P7 765 aaPredicted RBP18.45■□□□□ 0.54
BRK1-201ENST00000530758 JAK2O60674 1132 aa18.45■□□□□ 0.54
BRK1-201ENST00000530758 PPFIA3O75145 1194 aa18.45■□□□□ 0.54
BRK1-201ENST00000530758 POLR2MP0CAP2 368 aa18.45■□□□□ 0.54
BRK1-201ENST00000530758 MRPL12P52815 198 aaKnown RBP18.45■□□□□ 0.54
BRK1-201ENST00000530758 NAPAP54920 295 aa18.45■□□□□ 0.54
BRK1-201ENST00000530758 SLC30A10Q6XR72 485 aa18.45■□□□□ 0.54
BRK1-201ENST00000530758 CCDC148Q8NFR7 591 aa18.45■□□□□ 0.54
BRK1-201ENST00000530758 RAET1EQ8TD07 263 aa18.45■□□□□ 0.54
BRK1-201ENST00000530758 MORC4Q8TE76 937 aa18.45■□□□□ 0.54
BRK1-201ENST00000530758 ADD3Q9UEY8 706 aaKnown RBP18.45■□□□□ 0.54
BRK1-201ENST00000530758 BRCA2P51587 3418 aa18.44■□□□□ 0.54
BRK1-201ENST00000530758 ADCY3O60266 1144 aa18.44■□□□□ 0.54
BRK1-201ENST00000530758 CFBP00751 764 aa18.44■□□□□ 0.54
BRK1-201ENST00000530758 GNA11P29992 359 aa18.44■□□□□ 0.54
BRK1-201ENST00000530758 CLK2P49760 499 aaKnown RBP18.44■□□□□ 0.54
BRK1-201ENST00000530758 CNTN2Q02246 1040 aa18.44■□□□□ 0.54
BRK1-201ENST00000530758 MLLT1Q03111 559 aaPredicted RBP18.44■□□□□ 0.54
BRK1-201ENST00000530758 GALNT17Q6IS24 598 aa18.44■□□□□ 0.54
BRK1-201ENST00000530758 SLAIN1Q8ND83 568 aa18.44■□□□□ 0.54
BRK1-201ENST00000530758 CUL5Q93034 780 aa18.44■□□□□ 0.54
BRK1-201ENST00000530758 ARMC5Q96C12 935 aa18.44■□□□□ 0.54
BRK1-201ENST00000530758 INTS4Q96HW7 963 aaKnown RBP18.44■□□□□ 0.54
BRK1-201ENST00000530758 COL20A1Q9P218 1284 aa18.44■□□□□ 0.54
BRK1-201ENST00000530758 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.44■□□□□ 0.54
BRK1-201ENST00000530758 ASTN1O14525 1302 aa18.44■□□□□ 0.54
BRK1-201ENST00000530758 MCM3APO60318 1980 aa18.43■□□□□ 0.54
BRK1-201ENST00000530758 CALML3P27482 149 aa18.43■□□□□ 0.54
BRK1-201ENST00000530758 MCTP2Q6DN12 878 aa18.43■□□□□ 0.54
BRK1-201ENST00000530758 TRIB2Q92519 343 aa18.43■□□□□ 0.54
BRK1-201ENST00000530758 AIFM3Q96NN9 605 aa18.43■□□□□ 0.54
BRK1-201ENST00000530758 TAAR1Q96RJ0 339 aa18.43■□□□□ 0.54
BRK1-201ENST00000530758 TINF2Q9BSI4 451 aa18.43■□□□□ 0.54
BRK1-201ENST00000530758 C6orf50Q9HD87 102 aa18.43■□□□□ 0.54
BRK1-201ENST00000530758 FLRT1Q9NZU1 646 aa18.43■□□□□ 0.54
BRK1-201ENST00000530758 VPS54Q9P1Q0 977 aa18.43■□□□□ 0.54
BRK1-201ENST00000530758 XBP1P17861 261 aa18.42■□□□□ 0.54
BRK1-201ENST00000530758 EDNRBP24530 442 aa18.42■□□□□ 0.54
BRK1-201ENST00000530758 GRK4P32298 578 aa18.42■□□□□ 0.54
BRK1-201ENST00000530758 NPY5RQ15761 445 aa18.42■□□□□ 0.54
BRK1-201ENST00000530758 CCL14Q16627 93 aa18.42■□□□□ 0.54
BRK1-201ENST00000530758 USP17L6PQ6QN14 398 aa18.42■□□□□ 0.54
BRK1-201ENST00000530758 DAGLBQ8NCG7 672 aa18.42■□□□□ 0.54
BRK1-201ENST00000530758 PURBQ96QR8 312 aaKnown RBP18.42■□□□□ 0.54
BRK1-201ENST00000530758 IWS1Q96ST2 819 aa18.42■□□□□ 0.54
BRK1-201ENST00000530758 ALG1Q9BT22 464 aa18.42■□□□□ 0.54
BRK1-201ENST00000530758 PHF20Q9BVI0 1012 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms