RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 NCAPG2Q86XI2 1143 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 CCDC197Q8NCU1 140 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 LRRC59Q96AG4 307 aaKnown RBP15.61■□□□□ 0.09
PCF11-204ENST00000530660 PAGE5Q96GU1 130 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 RBM41Q96IZ5 413 aaKnown RBP15.61■□□□□ 0.09
PCF11-204ENST00000530660 BLZF1Q9H2G9 400 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 STXBP3O00186 592 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 PDHA1P08559 390 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 CYLC1P35663 651 aaPredicted RBP15.61■□□□□ 0.09
PCF11-204ENST00000530660 PPP2R2AP63151 447 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 PDIA5Q14554 519 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 PDIA6Q15084 440 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 KIF2BQ8N4N8 673 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 MREGQ8N565 214 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 ANKRD13CQ8N6S4 541 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 NKX2-3Q8TAU0 364 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 CEP131Q9UPN4 1083 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 STK38LQ9Y2H1 464 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 MST1RQ04912 1400 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 M0R2C6 588 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 KLK7P49862 253 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 RRAGBQ5VZM2 374 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 KANK3Q6NY19 840 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 MICU3Q86XE3 530 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 EEF2KMTQ96G04 330 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 RNMTO43148 476 aaKnown RBP15.6■□□□□ 0.09
PCF11-204ENST00000530660 TACC1O75410 805 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 HSD17B3P37058 310 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 MAGOHP61326 146 aaKnown RBP15.6■□□□□ 0.09
PCF11-204ENST00000530660 NEXNQ0ZGT2 675 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 TRIM29Q14134 588 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 AKAP4Q5JQC9 854 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 MAGOHBQ96A72 148 aaKnown RBP15.6■□□□□ 0.09
PCF11-204ENST00000530660 NAF1Q96HR8 494 aaKnown RBP15.6■□□□□ 0.09
PCF11-204ENST00000530660 LRRC4CQ9HCJ2 640 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 DDX21Q9NR30 783 aaKnown RBP eCLIP15.6■□□□□ 0.09
PCF11-204ENST00000530660 KCNJ14Q9UNX9 436 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 WDR17Q8IZU2 1322 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 ORC4O43929 436 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 TIMM10P62072 90 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 ZNF844Q08AG5 666 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 NOSTRINQ8IVI9 506 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 MYL10Q9BUA6 226 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 ZNF232Q9UNY5 417 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 HYOU1Q9Y4L1 999 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 ADAMTS13Q76LX8 1427 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 CCND1P24385 295 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 PIP4K2AP48426 406 aaPredicted RBP15.6■□□□□ 0.09
PCF11-204ENST00000530660 METAP2P50579 478 aaKnown RBP eCLIP15.6■□□□□ 0.093e-7■■■□□ 15.4
PCF11-204ENST00000530660 HLTFQ14527 1009 aaKnown RBP eCLIP15.6■□□□□ 0.09
PCF11-204ENST00000530660 ANO7Q6IWH7 933 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 MB21D2Q8IYB1 491 aaPredicted RBP15.6■□□□□ 0.09
PCF11-204ENST00000530660 CNBD1Q8NA66 436 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 KRT12Q99456 494 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 SYT15Q9BQS2 421 aa15.6■□□□□ 0.09
PCF11-204ENST00000530660 RASSF10A6NK89 507 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 ZSCAN9O15535 394 aaPredicted RBP15.59■□□□□ 0.09
PCF11-204ENST00000530660 CDKL5O76039 1030 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 ALADP13716 330 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 ZNF662Q6ZS27 426 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 FBXL16Q8N461 479 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 MB21D1Q8N884 522 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 C1orf131Q8NDD1 294 aaKnown RBP15.59■□□□□ 0.09
PCF11-204ENST00000530660 ABCF3Q9NUQ8 709 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 PCMTD2Q9NV79 361 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 CAPN11Q9UMQ6 739 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 SLIT1O75093 1534 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 LRRD1A4D1F6 860 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 LUC7L3O95232 432 aaKnown RBP15.59■□□□□ 0.09
PCF11-204ENST00000530660 NQO1P15559 274 aaKnown RBP15.59■□□□□ 0.09
PCF11-204ENST00000530660 CTNNA1P35221 906 aaKnown RBP15.59■□□□□ 0.09
PCF11-204ENST00000530660 POLE2P56282 527 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 MTA1Q13330 715 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 SLC39A6Q13433 755 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 MKRN4PQ13434 485 aaPredicted RBP15.59■□□□□ 0.09
PCF11-204ENST00000530660 UAP1Q16222 522 aaPredicted RBP15.59■□□□□ 0.09
PCF11-204ENST00000530660 LRRC23Q53EV4 343 aaPredicted RBP15.59■□□□□ 0.09
PCF11-204ENST00000530660 CCDC170Q8IYT3 715 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 PROCA1Q8NCQ7 364 aaPredicted RBP15.59■□□□□ 0.09
PCF11-204ENST00000530660 XAGE3Q8WTP9 111 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 CHMP6Q96FZ7 201 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 EID1Q9Y6B2 187 aa15.59■□□□□ 0.09
PCF11-204ENST00000530660 RGPD8O14715 1765 aaPredicted RBP15.59■□□□□ 0.09
PCF11-204ENST00000530660 H0YGN5 161 aa15.58■□□□□ 0.09
PCF11-204ENST00000530660 IGF2BP3O00425 579 aaKnown RBP eCLIP15.58■□□□□ 0.09
PCF11-204ENST00000530660 IFIT3O14879 490 aaKnown RBP15.58■□□□□ 0.09
PCF11-204ENST00000530660 ATP2A2P16615 1042 aaKnown RBP15.58■□□□□ 0.09
PCF11-204ENST00000530660 TCP1P17987 556 aaKnown RBP15.58■□□□□ 0.09
PCF11-204ENST00000530660 KIF5BP33176 963 aa15.58■□□□□ 0.09
PCF11-204ENST00000530660 UBE2OQ9C0C9 1292 aaKnown RBP15.58■□□□□ 0.09
PCF11-204ENST00000530660 NFS1Q9Y697 457 aa15.58■□□□□ 0.09
PCF11-204ENST00000530660 TRIM49BA6NDI0 452 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 RANBP6O60518 1105 aaKnown RBP15.58■□□□□ 0.08
PCF11-204ENST00000530660 CTNND1O60716 968 aaKnown RBP15.58■□□□□ 0.08
PCF11-204ENST00000530660 NR5A1Q13285 461 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 ARMC9Q7Z3E5 817 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 PCDHGA4Q9Y5G9 962 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 KRT16P08779 473 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 ADAM9Q13443 819 aa15.58■□□□□ 0.08
PCF11-204ENST00000530660 CUL3Q13618 768 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms