RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 RIPK3Q9Y572 518 aa9.94□□□□□ -0.82
CTSF-208ENST00000530565 MYH6P13533 1939 aa9.94□□□□□ -0.82
CTSF-208ENST00000530565 CCDC196A0A1B0GTZ2 297 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 ZBTB5O15062 677 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 ALAS1P13196 640 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 ADD1P35611 737 aaKnown RBP9.93□□□□□ -0.82
CTSF-208ENST00000530565 SLC4A3P48751 1232 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 CCT2P78371 535 aaKnown RBP9.93□□□□□ -0.82
CTSF-208ENST00000530565 STK3Q13188 491 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 TKFCQ3LXA3 575 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 WDR78Q5VTH9 848 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 NOL8Q76FK4 1167 aaKnown RBP9.93□□□□□ -0.82
CTSF-208ENST00000530565 GPR142Q7Z601 462 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 PLEKHH3Q7Z736 793 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 HOMER1Q86YM7 354 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 CCDC82Q8N4S0 544 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 CHST13Q8NET6 341 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 SNX21Q969T3 373 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 PIGSQ96S52 555 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 CWC22Q9HCG8 908 aaKnown RBP9.93□□□□□ -0.82
CTSF-208ENST00000530565 PNMA2Q9UL42 364 aa9.93□□□□□ -0.82
CTSF-208ENST00000530565 CNTNAP5Q8WYK1 1306 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 ZNF236Q9UL36 1845 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 PNMA6FA0A0J9YX94 578 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 STRNO43815 780 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 ST18O60284 1047 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 PFKFB2O60825 505 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 TAL1P17542 331 aaPredicted RBP9.92□□□□□ -0.82
CTSF-208ENST00000530565 PTPREP23469 700 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 FUT2Q10981 343 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 ME3Q16798 604 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 USH1GQ495M9 461 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 FBXO11Q86XK2 927 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 TRMT44Q8IYL2 757 aaKnown RBP9.92□□□□□ -0.82
CTSF-208ENST00000530565 PIBF1Q8WXW3 757 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 RRP36Q96EU6 259 aaKnown RBP9.92□□□□□ -0.82
CTSF-208ENST00000530565 TRERF1Q96PN7 1200 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 AMNQ9BXJ7 453 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 SLKQ9H2G2 1235 aaPredicted RBP9.92□□□□□ -0.82
CTSF-208ENST00000530565 ACAD9Q9H845 621 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 NCOA5Q9HCD5 579 aaKnown RBP9.92□□□□□ -0.82
CTSF-208ENST00000530565 HOMER2Q9NSB8 354 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 RNF146Q9NTX7 359 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 FLRT1Q9NZU1 646 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 SEC63Q9UGP8 760 aaKnown RBP9.92□□□□□ -0.82
CTSF-208ENST00000530565 FBXO40Q9UH90 709 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 IVNS1ABPQ9Y6Y0 642 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 BAZ2BQ9UIF8 2168 aaKnown RBP9.92□□□□□ -0.82
CTSF-208ENST00000530565 SMCHD1A6NHR9 2005 aa9.92□□□□□ -0.82
CTSF-208ENST00000530565 ABCB11O95342 1321 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 SLC15A5A6NIM6 579 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 PPP1R11O60927 126 aaPredicted RBP9.91□□□□□ -0.82
CTSF-208ENST00000530565 LARGE1O95461 756 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 IGHA2P01877 340 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 FCER1AP12319 257 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 RGS2P41220 211 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 SCRN1Q12765 414 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 TRAF1Q13077 416 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 GRB14Q14449 540 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 NTRK3Q16288 839 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 MUM1L1Q5H9M0 696 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.91□□□□□ -0.82
CTSF-208ENST00000530565 ABRAQ8N0Z2 381 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 FAM161BQ96MY7 647 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 MMP19Q99542 508 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 APBA2Q99767 749 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 DAXXQ9UER7 740 aaPredicted RBP9.91□□□□□ -0.82
CTSF-208ENST00000530565 LIMCH1Q9UPQ0 1083 aa9.91□□□□□ -0.82
CTSF-208ENST00000530565 ZNFX1Q9P2E3 1918 aaKnown RBP9.9□□□□□ -0.82
CTSF-208ENST00000530565 hCG_1642624A0A1W2PR95 340 aa9.9□□□□□ -0.82
CTSF-208ENST00000530565 NFIBO00712 420 aa9.9□□□□□ -0.82
CTSF-208ENST00000530565 CPLX1O14810 134 aa9.9□□□□□ -0.82
CTSF-208ENST00000530565 IFNAR1P17181 557 aa9.9□□□□□ -0.82
CTSF-208ENST00000530565 ADORA2AP29274 412 aa9.9□□□□□ -0.82
CTSF-208ENST00000530565 MCM2P49736 904 aa9.9□□□□□ -0.82
CTSF-208ENST00000530565 MAP2K5Q13163 448 aa9.9□□□□□ -0.82
CTSF-208ENST00000530565 KCTD2Q14681 263 aa9.9□□□□□ -0.82
CTSF-208ENST00000530565 CLEC4DQ8WXI8 215 aa9.9□□□□□ -0.82
CTSF-208ENST00000530565 GTF3C6Q969F1 213 aa9.9□□□□□ -0.82
CTSF-208ENST00000530565 ZSCAN31Q96LW9 406 aaPredicted RBP9.9□□□□□ -0.82
CTSF-208ENST00000530565 PCDHA1Q9Y5I3 950 aa9.9□□□□□ -0.82
CTSF-208ENST00000530565 V9GY48 417 aaPredicted RBP9.9□□□□□ -0.82
CTSF-208ENST00000530565 PRPF3O43395 683 aaKnown RBP9.89□□□□□ -0.83
CTSF-208ENST00000530565 PGK2P07205 417 aa9.89□□□□□ -0.83
CTSF-208ENST00000530565 CPLX2Q6PUV4 134 aaKnown RBP9.89□□□□□ -0.83
CTSF-208ENST00000530565 DPP9Q86TI2 863 aa9.89□□□□□ -0.83
CTSF-208ENST00000530565 ANKRD35Q8N283 1001 aa9.89□□□□□ -0.83
CTSF-208ENST00000530565 NECAB1Q8N987 351 aa9.89□□□□□ -0.83
CTSF-208ENST00000530565 TRPV1Q8NER1 839 aa9.89□□□□□ -0.83
CTSF-208ENST00000530565 PHKBQ93100 1093 aa9.89□□□□□ -0.83
CTSF-208ENST00000530565 DDX11Q96FC9 970 aa9.89□□□□□ -0.83
CTSF-208ENST00000530565 CDX2Q99626 313 aaPredicted RBP9.89□□□□□ -0.83
CTSF-208ENST00000530565 SLC26A6Q9BXS9 759 aa9.89□□□□□ -0.83
CTSF-208ENST00000530565 RNF26Q9BY78 433 aaPredicted RBP9.89□□□□□ -0.83
CTSF-208ENST00000530565 SENP6Q9GZR1 1112 aaPredicted RBP9.89□□□□□ -0.83
CTSF-208ENST00000530565 A1CFQ9NQ94 594 aaKnown RBP9.89□□□□□ -0.83
CTSF-208ENST00000530565 SH2B1Q9NRF2 756 aaPredicted RBP9.89□□□□□ -0.83
CTSF-208ENST00000530565 MRPL11Q9Y3B7 192 aaKnown RBP9.89□□□□□ -0.83
CTSF-208ENST00000530565 PLXNA1Q9UIW2 1896 aa9.89□□□□□ -0.83
CTSF-208ENST00000530565 DNAJC25-GNG10A0A024R161 153 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms