RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 FAM126BQ8IXS8 530 aa24.49■■□□□ 1.51
SMPD1-204ENST00000530395 PNMA1Q8ND90 353 aa24.49■■□□□ 1.51
SMPD1-204ENST00000530395 CLEC4DQ8WXI8 215 aa24.49■■□□□ 1.51
SMPD1-204ENST00000530395 FAM161BQ96MY7 647 aa24.49■■□□□ 1.51
SMPD1-204ENST00000530395 SEZ6LQ9BYH1 1024 aa24.49■■□□□ 1.51
SMPD1-204ENST00000530395 B4E1Z4 1266 aa24.48■■□□□ 1.51
SMPD1-204ENST00000530395 GOLGA8HP0CJ92 632 aa24.48■■□□□ 1.51
SMPD1-204ENST00000530395 MFSD5Q6N075 450 aa24.48■■□□□ 1.51
SMPD1-204ENST00000530395 GUCD1Q96NT3 240 aa24.48■■□□□ 1.51
SMPD1-204ENST00000530395 ZSCAN10Q96SZ4 725 aaPredicted RBP24.48■■□□□ 1.51
SMPD1-204ENST00000530395 KRT23Q9C075 422 aa24.48■■□□□ 1.51
SMPD1-204ENST00000530395 CNNM2Q9H8M5 875 aa24.48■■□□□ 1.51
SMPD1-204ENST00000530395 PPIGQ13427 754 aaKnown RBP eCLIP24.47■■□□□ 1.51
SMPD1-204ENST00000530395 SUPT16HQ9Y5B9 1047 aaKnown RBP24.47■■□□□ 1.51
SMPD1-204ENST00000530395 CDH23Q9H251 3354 aa24.46■■□□□ 1.51
SMPD1-204ENST00000530395 B4DLN1 442 aa24.46■■□□□ 1.51
SMPD1-204ENST00000530395 MRPL12P52815 198 aaKnown RBP24.46■■□□□ 1.51
SMPD1-204ENST00000530395 RPS6P62753 249 aaKnown RBP24.46■■□□□ 1.51
SMPD1-204ENST00000530395 PDE4DQ08499 809 aa24.46■■□□□ 1.51
SMPD1-204ENST00000530395 USH1GQ495M9 461 aa24.46■■□□□ 1.51
SMPD1-204ENST00000530395 DUSP28Q4G0W2 176 aa24.46■■□□□ 1.51
SMPD1-204ENST00000530395 ASPRV1Q53RT3 343 aa24.46■■□□□ 1.51
SMPD1-204ENST00000530395 TMEM199Q8N511 208 aa24.46■■□□□ 1.51
SMPD1-204ENST00000530395 ANKS1AQ92625 1134 aa24.46■■□□□ 1.51
SMPD1-204ENST00000530395 UNC80Q8N2C7 3258 aa24.46■■□□□ 1.51
SMPD1-204ENST00000530395 TNKSO95271 1327 aa24.45■■□□□ 1.5
SMPD1-204ENST00000530395 ITGA7Q13683 1181 aa24.45■■□□□ 1.5
SMPD1-204ENST00000530395 ENAHQ8N8S7 591 aaPredicted RBP24.45■■□□□ 1.5
SMPD1-204ENST00000530395 SLC43A3Q8NBI5 491 aa24.45■■□□□ 1.5
SMPD1-204ENST00000530395 DNERQ8NFT8 737 aa24.45■■□□□ 1.5
SMPD1-204ENST00000530395 UBAC1Q9BSL1 405 aa24.45■■□□□ 1.5
SMPD1-204ENST00000530395 WDR11Q9BZH6 1224 aa24.45■■□□□ 1.5
SMPD1-204ENST00000530395 PPP1R12CQ9BZL4 782 aa24.45■■□□□ 1.5
SMPD1-204ENST00000530395 UBA5Q9GZZ9 404 aa24.45■■□□□ 1.5
SMPD1-204ENST00000530395 RAD50Q92878 1312 aa24.44■■□□□ 1.5
SMPD1-204ENST00000530395 CD4P01730 458 aa24.44■■□□□ 1.5
SMPD1-204ENST00000530395 PTGS1P23219 599 aa24.44■■□□□ 1.5
SMPD1-204ENST00000530395 CDC37Q16543 378 aaPredicted RBP24.44■■□□□ 1.5
SMPD1-204ENST00000530395 TTC22Q5TAA0 569 aa24.44■■□□□ 1.5
SMPD1-204ENST00000530395 ZSWIM5Q9P217 1185 aa24.44■■□□□ 1.5
SMPD1-204ENST00000530395 ABCB11O95342 1321 aa24.43■■□□□ 1.5
SMPD1-204ENST00000530395 RBM47A0AV96 593 aaKnown RBP24.43■■□□□ 1.5
SMPD1-204ENST00000530395 CPT1AP50416 773 aa24.43■■□□□ 1.5
SMPD1-204ENST00000530395 TMEM63BQ5T3F8 832 aa24.43■■□□□ 1.5
SMPD1-204ENST00000530395 RGS22Q8NE09 1264 aa24.43■■□□□ 1.5
SMPD1-204ENST00000530395 MAF1Q9H063 256 aa24.43■■□□□ 1.5
SMPD1-204ENST00000530395 CPVLQ9H3G5 476 aa24.43■■□□□ 1.5
SMPD1-204ENST00000530395 SEMA6BQ9H3T3 888 aa24.43■■□□□ 1.5
SMPD1-204ENST00000530395 POLR3EQ9NVU0 708 aa24.43■■□□□ 1.5
SMPD1-204ENST00000530395 TMEM265A0A087WTH1 108 aa24.42■■□□□ 1.5
SMPD1-204ENST00000530395 DHX16O60231 1041 aaKnown RBP24.42■■□□□ 1.5
SMPD1-204ENST00000530395 PARP1P09874 1014 aaKnown RBP24.42■■□□□ 1.5
SMPD1-204ENST00000530395 PDE4AP27815 886 aa24.42■■□□□ 1.5
SMPD1-204ENST00000530395 PPP2R5BQ15173 497 aa24.42■■□□□ 1.5
SMPD1-204ENST00000530395 BRDTQ58F21 947 aaPredicted RBP24.42■■□□□ 1.5
SMPD1-204ENST00000530395 PSRC1Q6PGN9 363 aaPredicted RBP24.42■■□□□ 1.5
SMPD1-204ENST00000530395 ADGRF4Q8IZF3 695 aa24.42■■□□□ 1.5
SMPD1-204ENST00000530395 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.42■■□□□ 1.5
SMPD1-204ENST00000530395 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.41■■□□□ 1.5
SMPD1-204ENST00000530395 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.41■■□□□ 1.5
SMPD1-204ENST00000530395 NKRFO15226 690 aaKnown RBP eCLIP24.41■■□□□ 1.5
SMPD1-204ENST00000530395 GSPT1P15170 499 aaKnown RBP24.41■■□□□ 1.5
SMPD1-204ENST00000530395 CSF2RAP15509 400 aa24.41■■□□□ 1.5
SMPD1-204ENST00000530395 EDNRBP24530 442 aa24.41■■□□□ 1.5
SMPD1-204ENST00000530395 IFIT1BQ5T764 474 aaKnown RBP24.41■■□□□ 1.5
SMPD1-204ENST00000530395 OR6J1Q8NGC5 347 aa24.41■■□□□ 1.5
SMPD1-204ENST00000530395 SCFD2Q8WU76 684 aa24.41■■□□□ 1.5
SMPD1-204ENST00000530395 RUFY2Q8WXA3 655 aa24.41■■□□□ 1.5
SMPD1-204ENST00000530395 HIPK3Q9H422 1215 aa24.41■■□□□ 1.5
SMPD1-204ENST00000530395 EYSQ5T1H1 3165 aa24.4■■□□□ 1.5
SMPD1-204ENST00000530395 PSMC6P62333 389 aa24.4■■□□□ 1.5
SMPD1-204ENST00000530395 TRDNQ13061 729 aa24.4■■□□□ 1.5
SMPD1-204ENST00000530395 MCF2L2Q86YR7 1114 aa24.4■■□□□ 1.5
SMPD1-204ENST00000530395 CDX2Q99626 313 aaPredicted RBP24.4■■□□□ 1.5
SMPD1-204ENST00000530395 GPHNQ9NQX3 736 aaPredicted RBP24.4■■□□□ 1.5
SMPD1-204ENST00000530395 CUL9Q8IWT3 2517 aa24.4■■□□□ 1.5
SMPD1-204ENST00000530395 GRIN2DO15399 1336 aa24.39■■□□□ 1.5
SMPD1-204ENST00000530395 CYP2C18P33260 490 aa24.39■■□□□ 1.49
SMPD1-204ENST00000530395 TMEM240Q5SV17 173 aa24.39■■□□□ 1.49
SMPD1-204ENST00000530395 IL25Q9H293 177 aa24.39■■□□□ 1.49
SMPD1-204ENST00000530395 TTYH1Q9H313 450 aaPredicted RBP24.39■■□□□ 1.49
SMPD1-204ENST00000530395 DLL1O00548 723 aa24.38■■□□□ 1.49
SMPD1-204ENST00000530395 MYL3P08590 195 aa24.38■■□□□ 1.49
SMPD1-204ENST00000530395 QRICH1Q2TAL8 776 aa24.38■■□□□ 1.49
SMPD1-204ENST00000530395 FBXO11Q86XK2 927 aa24.38■■□□□ 1.49
SMPD1-204ENST00000530395 MTG1Q9BT17 334 aaPredicted RBP24.38■■□□□ 1.49
SMPD1-204ENST00000530395 TRPV6Q9H1D0 765 aa24.38■■□□□ 1.49
SMPD1-204ENST00000530395 IL23AQ9NPF7 189 aa24.38■■□□□ 1.49
SMPD1-204ENST00000530395 MRPL11Q9Y3B7 192 aaKnown RBP24.38■■□□□ 1.49
SMPD1-204ENST00000530395 KIAA1217Q5T5P2 1943 aa24.37■■□□□ 1.49
SMPD1-204ENST00000530395 B4GALT4O60513 344 aa24.37■■□□□ 1.49
SMPD1-204ENST00000530395 TXNP10599 105 aaKnown RBP24.37■■□□□ 1.49
SMPD1-204ENST00000530395 DNAJB2P25686 324 aa24.37■■□□□ 1.49
SMPD1-204ENST00000530395 PURAQ00577 322 aaKnown RBP24.37■■□□□ 1.49
SMPD1-204ENST00000530395 TTLL4Q14679 1199 aa24.37■■□□□ 1.49
SMPD1-204ENST00000530395 C16orf59Q7L2K0 433 aa24.37■■□□□ 1.49
SMPD1-204ENST00000530395 ALDH8A1Q9H2A2 487 aaPredicted RBP24.37■■□□□ 1.49
SMPD1-204ENST00000530395 MTIF3Q9H2K0 278 aaKnown RBP24.37■■□□□ 1.49
SMPD1-204ENST00000530395 JMJD4Q9H9V9 463 aa24.37■■□□□ 1.49
SMPD1-204ENST00000530395 VAT1LQ9HCJ6 419 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms