RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 GNA11P29992 359 aa12.2□□□□□ -0.46
SOX6-213ENST00000530378 ERVK-9P63128 1117 aa12.2□□□□□ -0.46
SOX6-213ENST00000530378 ERVK-24P63145 666 aa12.2□□□□□ -0.46
SOX6-213ENST00000530378 UBXN2AP68543 259 aa12.2□□□□□ -0.46
SOX6-213ENST00000530378 DNM1Q05193 864 aaKnown RBP12.2□□□□□ -0.46
SOX6-213ENST00000530378 NOGQ13253 232 aa12.2□□□□□ -0.46
SOX6-213ENST00000530378 PURBQ96QR8 312 aaKnown RBP12.2□□□□□ -0.46
SOX6-213ENST00000530378 PORCNQ9H237 461 aa12.2□□□□□ -0.46
SOX6-213ENST00000530378 GDPD2Q9HCC8 539 aa12.2□□□□□ -0.46
SOX6-213ENST00000530378 ZNFX1Q9P2E3 1918 aaKnown RBP12.19□□□□□ -0.46
SOX6-213ENST00000530378 CCDC194A0A1B0GVG4 234 aa12.19□□□□□ -0.46
SOX6-213ENST00000530378 ESYT2A0FGR8 921 aa12.19□□□□□ -0.46
SOX6-213ENST00000530378 WNT7AO00755 349 aa12.19□□□□□ -0.46
SOX6-213ENST00000530378 MEIS2O14770 477 aa12.19□□□□□ -0.46
SOX6-213ENST00000530378 FDX1P10109 184 aa12.19□□□□□ -0.46
SOX6-213ENST00000530378 CRHR2Q13324 411 aa12.19□□□□□ -0.46
SOX6-213ENST00000530378 INF2Q27J81 1249 aa12.19□□□□□ -0.46
SOX6-213ENST00000530378 MB21D1Q8N884 522 aa12.19□□□□□ -0.46
SOX6-213ENST00000530378 DAGLBQ8NCG7 672 aa12.19□□□□□ -0.46
SOX6-213ENST00000530378 TNFRSF25Q93038 417 aa12.19□□□□□ -0.46
SOX6-213ENST00000530378 FOXP1Q9H334 677 aaPredicted RBP12.19□□□□□ -0.46
SOX6-213ENST00000530378 TFIP11Q9UBB9 837 aaKnown RBP12.19□□□□□ -0.46
SOX6-213ENST00000530378 CNPY2Q9Y2B0 182 aa12.19□□□□□ -0.46
SOX6-213ENST00000530378 SLC45A1Q9Y2W3 748 aa12.19□□□□□ -0.46
SOX6-213ENST00000530378 DDX49Q9Y6V7 483 aaKnown RBP12.19□□□□□ -0.46
SOX6-213ENST00000530378 DOCK3Q8IZD9 2030 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 GCOM1H8Y6P7 765 aaPredicted RBP12.18□□□□□ -0.46
SOX6-213ENST00000530378 FIBPO43427 364 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 POLR2MP0CAP2 368 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 ERCC3P19447 782 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 U2AF2P26368 475 aaKnown RBP eCLIP12.18□□□□□ -0.46
SOX6-213ENST00000530378 MRPL12P52815 198 aaKnown RBP12.18□□□□□ -0.46
SOX6-213ENST00000530378 OAZ1P54368 228 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 MYSM1Q5VVJ2 828 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 BICD2Q8TD16 824 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 ZFP91Q96JP5 570 aaPredicted RBP12.18□□□□□ -0.46
SOX6-213ENST00000530378 ACAD9Q9H845 621 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 EFCC1Q9HA90 598 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 COL20A1Q9P218 1284 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 RABGAP1Q9Y3P9 1069 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 M0R2N6 131 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 HSPA1AP0DMV8 641 aaKnown RBP12.18□□□□□ -0.46
SOX6-213ENST00000530378 HSPA1BP0DMV9 641 aaKnown RBP12.18□□□□□ -0.46
SOX6-213ENST00000530378 RPS6P62753 249 aaKnown RBP12.18□□□□□ -0.46
SOX6-213ENST00000530378 RNF207Q6ZRF8 634 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 BRAPQ7Z569 592 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 RIOX2Q8IUF8 465 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 ANO3Q9BYT9 981 aa12.18□□□□□ -0.46
SOX6-213ENST00000530378 ZSCAN16Q9H4T2 348 aaPredicted RBP12.18□□□□□ -0.46
SOX6-213ENST00000530378 MCM3APO60318 1980 aa12.17□□□□□ -0.46
SOX6-213ENST00000530378 SPDYE3A6NKU9 549 aa12.17□□□□□ -0.46
SOX6-213ENST00000530378 ATP2A1O14983 1001 aa12.17□□□□□ -0.46
SOX6-213ENST00000530378 BAG4O95429 457 aaKnown RBP12.17□□□□□ -0.46
SOX6-213ENST00000530378 BAATQ14032 418 aaPredicted RBP12.17□□□□□ -0.46
SOX6-213ENST00000530378 GALNT17Q6IS24 598 aa12.17□□□□□ -0.46
SOX6-213ENST00000530378 ANKRD35Q8N283 1001 aa12.17□□□□□ -0.46
SOX6-213ENST00000530378 GPRC5AQ8NFJ5 357 aa12.17□□□□□ -0.46
SOX6-213ENST00000530378 UIMC1Q96RL1 719 aa12.17□□□□□ -0.46
SOX6-213ENST00000530378 USP28Q96RU2 1077 aa12.17□□□□□ -0.46
SOX6-213ENST00000530378 A1CFQ9NQ94 594 aaKnown RBP12.17□□□□□ -0.46
SOX6-213ENST00000530378 ADGRA2Q96PE1 1338 aa12.17□□□□□ -0.46
SOX6-213ENST00000530378 PLXNA1Q9UIW2 1896 aa12.17□□□□□ -0.46
SOX6-213ENST00000530378 THSD7BQ9C0I4 1608 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 PGK2P07205 417 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 TM4SF4P48230 202 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 GCLCP48506 637 aaPredicted RBP12.16□□□□□ -0.46
SOX6-213ENST00000530378 CLK2P49760 499 aaKnown RBP12.16□□□□□ -0.46
SOX6-213ENST00000530378 TOB1P50616 345 aaPredicted RBP12.16□□□□□ -0.46
SOX6-213ENST00000530378 TRAF1Q13077 416 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 NONOQ15233 471 aaKnown RBP eCLIP12.16□□□□□ -0.46
SOX6-213ENST00000530378 KRT25Q7Z3Z0 450 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 CCAR1Q8IX12 1150 aaKnown RBP12.16□□□□□ -0.46
SOX6-213ENST00000530378 TBCKQ8TEA7 893 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 CLIC4Q9Y696 253 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 MGAMO43451 1857 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 TBC1D8O95759 1140 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 EIF2AK2P19525 551 aaKnown RBP12.16□□□□□ -0.46
SOX6-213ENST00000530378 INHBEP58166 350 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 ZNF174Q15697 407 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 LETM2Q2VYF4 491 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 MCF2L2Q86YR7 1114 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 IL31RAQ8NI17 732 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 SYTL5Q8TDW5 730 aaPredicted RBP12.16□□□□□ -0.46
SOX6-213ENST00000530378 ZFYVE28Q9HCC9 887 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 PCDHB6Q9Y5E3 794 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 ATP6V1DQ9Y5K8 247 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 MRVI1Q9Y6F6 885 aa12.16□□□□□ -0.46
SOX6-213ENST00000530378 CENPFP49454 3210 aa12.15□□□□□ -0.46
SOX6-213ENST00000530378 TRPA1O75762 1119 aa12.15□□□□□ -0.46
SOX6-213ENST00000530378 PDIA4P13667 645 aaKnown RBP12.15□□□□□ -0.46
SOX6-213ENST00000530378 MCM7P33993 719 aa12.15□□□□□ -0.46
SOX6-213ENST00000530378 HSD17B4P51659 736 aa12.15□□□□□ -0.46
SOX6-213ENST00000530378 CNTN2Q02246 1040 aa12.15□□□□□ -0.46
SOX6-213ENST00000530378 FAM110CQ1W6H9 321 aa12.15□□□□□ -0.46
SOX6-213ENST00000530378 TKFCQ3LXA3 575 aa12.15□□□□□ -0.46
SOX6-213ENST00000530378 TTC38Q5R3I4 469 aa12.15□□□□□ -0.46
SOX6-213ENST00000530378 CHST13Q8NET6 341 aa12.15□□□□□ -0.46
SOX6-213ENST00000530378 GTF3C2Q8WUA4 911 aaPredicted RBP12.15□□□□□ -0.46
SOX6-213ENST00000530378 TAAR1Q96RJ0 339 aa12.15□□□□□ -0.46
SOX6-213ENST00000530378 GLT8D2Q9H1C3 349 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms