RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 GPTP24298 496 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 SERPINB4P48594 390 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 HSP90AB3PQ58FF7 597 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 NLRP10Q86W26 655 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 RCAN3Q9UKA8 241 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 PCOLCE2Q9UKZ9 415 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 WWC3Q9ULE0 1092 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 NOB1Q9ULX3 412 aaKnown RBP11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 TNNQ9UQP3 1299 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 NIP7Q9Y221 180 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 RIC1Q4ADV7 1423 aa11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 TNRC6CQ9HCJ0 1690 aaKnown RBP11.08□□□□□ -0.64
CCDC90B-217ENST00000530253 RNGTTO60942 597 aaKnown RBP11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 NTSR2O95665 410 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 SERPINB2P05120 415 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 YY1P25490 414 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 BNIP3Q12983 259 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 ECM1Q16610 540 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 BEND3Q5T5X7 828 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 SUSD4Q5VX71 490 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 PRR5LQ6MZQ0 368 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 FAM181AQ8N9Y4 354 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 DNAAF4Q8WXU2 420 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 WDR89Q96FK6 387 aaPredicted RBP11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 HRASLS5Q96KN8 279 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 DMRTB1Q96MA1 342 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 MYD88Q99836 296 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 DISC1Q9NRI5 854 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 ABCC4O15439 1325 aa11.07□□□□□ -0.64
CCDC90B-217ENST00000530253 ANKRD31Q8N7Z5 1873 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 TMEM265A0A087WTH1 108 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 ZNF862O60290 1169 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 FARP2O94887 1054 aaPredicted RBP11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 CD8BP10966 210 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 XRCC5P13010 732 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 TRIM27P14373 513 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 PKN1Q16512 942 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 GPR162Q16538 588 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 PARP10Q53GL7 1025 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 DTHD1Q6ZMT9 781 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 PI4K2BQ8TCG2 481 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 ARHGAP45Q92619 1136 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 SETDB2Q96T68 719 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 ZC3H12CQ9C0D7 883 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 TMEM39AQ9NV64 488 aa11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 GPN3Q9UHW5 284 aaPredicted RBP11.06□□□□□ -0.64
CCDC90B-217ENST00000530253 LAMB2P55268 1798 aa11.05□□□□□ -0.64
CCDC90B-217ENST00000530253 CEACAM5P06731 702 aa11.05□□□□□ -0.64
CCDC90B-217ENST00000530253 COL11A2P13942 1736 aaPredicted RBP11.05□□□□□ -0.64
CCDC90B-217ENST00000530253 FAAP100Q0VG06 881 aa11.05□□□□□ -0.64
CCDC90B-217ENST00000530253 GRM2Q14416 872 aa11.05□□□□□ -0.64
CCDC90B-217ENST00000530253 TTLL4Q14679 1199 aa11.05□□□□□ -0.64
CCDC90B-217ENST00000530253 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-217ENST00000530253 GLIS3Q8NEA6 775 aa11.05□□□□□ -0.64
CCDC90B-217ENST00000530253 LINS1Q8NG48 757 aa11.05□□□□□ -0.64
CCDC90B-217ENST00000530253 FAM168AQ92567 244 aa11.05□□□□□ -0.64
CCDC90B-217ENST00000530253 API5Q9BZZ5 524 aaKnown RBP11.05□□□□□ -0.64
CCDC90B-217ENST00000530253 PCDHGC5Q9Y5F6 944 aa11.05□□□□□ -0.64
CCDC90B-217ENST00000530253 ZNF157P51786 506 aaPredicted RBP11.04□□□□□ -0.64
CCDC90B-217ENST00000530253 ANGEL2Q5VTE6 544 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-217ENST00000530253 ATF7IPQ6VMQ6 1270 aa11.04□□□□□ -0.64
CCDC90B-217ENST00000530253 CNBD1Q8NA66 436 aa11.04□□□□□ -0.64
CCDC90B-217ENST00000530253 CCDC191Q8NCU4 936 aa11.04□□□□□ -0.64
CCDC90B-217ENST00000530253 TMEM40Q8WWA1 233 aa11.04□□□□□ -0.64
CCDC90B-217ENST00000530253 ALKBH8Q96BT7 664 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-217ENST00000530253 NIF3L1Q9GZT8 377 aa11.04□□□□□ -0.64
CCDC90B-217ENST00000530253 SSU72Q9NP77 194 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-217ENST00000530253 RNF123Q5XPI4 1314 aa11.04□□□□□ -0.64
CCDC90B-217ENST00000530253 DDX60Q8IY21 1712 aaKnown RBP11.04□□□□□ -0.64
CCDC90B-217ENST00000530253 CHD4Q14839 1912 aa11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 GPR182O15218 404 aa11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 RNASE1P07998 156 aaKnown RBP11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 HCLS1P14317 486 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 CASP7P55210 303 aa11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 ZNF648Q5T619 568 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 ZKSCAN2Q63HK3 967 aa11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 NBPF5PQ86XG9 351 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 SYNE4Q8N205 404 aa11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 FRAT1Q92837 279 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 CSRNP1Q96S65 589 aa11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 DUSP23Q9BVJ7 150 aa11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 CWC25Q9NXE8 425 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-217ENST00000530253 ALDH1L1O75891 902 aa11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 PCCAP05165 728 aaPredicted RBP11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 RLBP1P12271 317 aa11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 NEXNQ0ZGT2 675 aa11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 GCKRQ14397 625 aa11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 AOC3Q16853 763 aa11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 PPP1R42Q7Z4L9 355 aa11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 KCNB2Q92953 911 aa11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 UTP14AQ9BVJ6 771 aaKnown RBP11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 KRTAP4-7Q9BYR0 210 aa11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 SRCIN1Q9C0H9 1055 aa11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 NYXQ9GZU5 481 aa11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 MBNL3Q9NUK0 354 aaKnown RBP11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 CD2APQ9Y5K6 639 aa11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 DLEC1Q9Y238 1755 aa11.02□□□□□ -0.65
CCDC90B-217ENST00000530253 KLRG2A4D1S0 409 aaPredicted RBP11.01□□□□□ -0.65
CCDC90B-217ENST00000530253 DBX1A6NMT0 343 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms