RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 SIGLEC10Q96LC7 697 aa7.45□□□□□ -1.22
USP47-209ENST00000530041 KCTD3Q9Y597 815 aa7.45□□□□□ -1.22
USP47-209ENST00000530041 IRAK3Q9Y616 596 aa7.45□□□□□ -1.22
USP47-209ENST00000530041 NPHP3-ACAD11A0A0J9YXS1 232 aa7.44□□□□□ -1.22
USP47-209ENST00000530041 DDAH1O94760 285 aa7.44□□□□□ -1.22
USP47-209ENST00000530041 TACR1P25103 407 aa7.44□□□□□ -1.22
USP47-209ENST00000530041 CDR1P51861 262 aa7.44□□□□□ -1.22
USP47-209ENST00000530041 SCRN1Q12765 414 aa7.44□□□□□ -1.22
USP47-209ENST00000530041 FBLN7Q53RD9 439 aa7.44□□□□□ -1.22
USP47-209ENST00000530041 ZNF385BQ569K4 471 aa7.44□□□□□ -1.22
USP47-209ENST00000530041 GTF2IRD2BQ6EKJ0 949 aa7.44□□□□□ -1.22
USP47-209ENST00000530041 GTF2IRD2Q86UP8 949 aa7.44□□□□□ -1.22
USP47-209ENST00000530041 LDHDQ86WU2 507 aa7.44□□□□□ -1.22
USP47-209ENST00000530041 MZB1Q8WU39 189 aa7.44□□□□□ -1.22
USP47-209ENST00000530041 CYP26B1Q9NR63 512 aa7.44□□□□□ -1.22
USP47-209ENST00000530041 RFXAPO00287 272 aa7.43□□□□□ -1.22
USP47-209ENST00000530041 IRS4O14654 1257 aaPredicted RBP7.43□□□□□ -1.22
USP47-209ENST00000530041 SUSD5O60279 629 aa7.43□□□□□ -1.22
USP47-209ENST00000530041 RBM10P98175 930 aaKnown RBP7.43□□□□□ -1.22
USP47-209ENST00000530041 SSPNQ14714 243 aa7.43□□□□□ -1.22
USP47-209ENST00000530041 CPNE8Q86YQ8 564 aa7.43□□□□□ -1.22
USP47-209ENST00000530041 MICAL1Q8TDZ2 1067 aa7.43□□□□□ -1.22
USP47-209ENST00000530041 IRF2BPLQ9H1B7 796 aa7.43□□□□□ -1.22
USP47-209ENST00000530041 NKX2-4Q9H2Z4 354 aa7.43□□□□□ -1.22
USP47-209ENST00000530041 GLI4P10075 376 aa7.42□□□□□ -1.22
USP47-209ENST00000530041 SV2CQ496J9 727 aa7.42□□□□□ -1.22
USP47-209ENST00000530041 MRM1Q6IN84 353 aaKnown RBP7.42□□□□□ -1.22
USP47-209ENST00000530041 IGDCC3Q8IVU1 814 aa7.42□□□□□ -1.22
USP47-209ENST00000530041 LZTR1Q8N653 840 aa7.42□□□□□ -1.22
USP47-209ENST00000530041 MMP19Q99542 508 aa7.42□□□□□ -1.22
USP47-209ENST00000530041 LGR4Q9BXB1 951 aa7.42□□□□□ -1.22
USP47-209ENST00000530041 GPRC5CQ9NQ84 441 aa7.42□□□□□ -1.22
USP47-209ENST00000530041 CLEC1BQ9P126 229 aa7.42□□□□□ -1.22
USP47-209ENST00000530041 R3HCC1Q9Y3T6 440 aaKnown RBP7.42□□□□□ -1.22
USP47-209ENST00000530041 RWDD3Q9Y3V2 267 aa7.42□□□□□ -1.22
USP47-209ENST00000530041 PCDHA5Q9Y5H7 936 aa7.42□□□□□ -1.22
USP47-209ENST00000530041 C7orf72A4D263 438 aa7.41□□□□□ -1.22
USP47-209ENST00000530041 NPHS1O60500 1241 aa7.41□□□□□ -1.22
USP47-209ENST00000530041 PPP1R11O60927 126 aaPredicted RBP7.41□□□□□ -1.22
USP47-209ENST00000530041 ITGAVP06756 1048 aa7.41□□□□□ -1.22
USP47-209ENST00000530041 THBDP07204 575 aa7.41□□□□□ -1.22
USP47-209ENST00000530041 PLS3P13797 630 aa7.41□□□□□ -1.22
USP47-209ENST00000530041 PI3P19957 117 aa7.41□□□□□ -1.22
USP47-209ENST00000530041 CABP7Q86V35 215 aa7.41□□□□□ -1.22
USP47-209ENST00000530041 MTA3Q9BTC8 594 aa7.41□□□□□ -1.22
USP47-209ENST00000530041 LRP2BPQ9P2M1 347 aa7.41□□□□□ -1.22
USP47-209ENST00000530041 GULP1Q9UBP9 304 aa7.41□□□□□ -1.22
USP47-209ENST00000530041 IRS2Q9Y4H2 1338 aa7.41□□□□□ -1.22
USP47-209ENST00000530041 KRTAP4-8A0A0G2JLE6 195 aa7.4□□□□□ -1.22
USP47-209ENST00000530041 F8W031 263 aaPredicted RBP7.4□□□□□ -1.22
USP47-209ENST00000530041 GJB6O95452 261 aa7.4□□□□□ -1.22
USP47-209ENST00000530041 ZNF200P98182 395 aaPredicted RBP7.4□□□□□ -1.22
USP47-209ENST00000530041 EEPD1Q7L9B9 569 aa7.4□□□□□ -1.22
USP47-209ENST00000530041 ZNF227Q86WZ6 799 aa7.4□□□□□ -1.22
USP47-209ENST00000530041 BTN2A2Q8WVV5 523 aa7.4□□□□□ -1.22
USP47-209ENST00000530041 HNRNPLLQ8WVV9 542 aaKnown RBP7.4□□□□□ -1.22
USP47-209ENST00000530041 EPN3Q9H201 632 aa7.4□□□□□ -1.22
USP47-209ENST00000530041 DBR1Q9UK59 544 aaKnown RBP7.4□□□□□ -1.22
USP47-209ENST00000530041 HCFC2Q9Y5Z7 792 aa7.4□□□□□ -1.22
USP47-209ENST00000530041 ZC3H12DA2A288 527 aaKnown RBP7.39□□□□□ -1.23
USP47-209ENST00000530041 TBX1O43435 398 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 HOXC12P31275 282 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 PRR5P85299 388 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 CYP4F3Q08477 520 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 TCERG1LQ5VWI1 586 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 MBLAC2Q68D91 279 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 IQCEQ6IPM2 695 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 ANKS3Q6ZW76 656 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 TMEM151BQ8IW70 566 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 TMEFF1Q8IYR6 380 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 NPLOC4Q8TAT6 608 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 PANK1Q8TE04 598 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 FRS2Q8WU20 508 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 EPB41L4AQ9HCS5 686 aaPredicted RBP7.39□□□□□ -1.23
USP47-209ENST00000530041 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.39□□□□□ -1.23
USP47-209ENST00000530041 FBLN5Q9UBX5 448 aa7.39□□□□□ -1.23
USP47-209ENST00000530041 KLF4O43474 513 aa7.38□□□□□ -1.23
USP47-209ENST00000530041 BUB1BO60566 1050 aaPredicted RBP7.38□□□□□ -1.23
USP47-209ENST00000530041 SCG5P05408 212 aa7.38□□□□□ -1.23
USP47-209ENST00000530041 NCKAP1LP55160 1127 aa7.38□□□□□ -1.23
USP47-209ENST00000530041 ZC3H6P61129 1189 aaKnown RBP7.38□□□□□ -1.23
USP47-209ENST00000530041 CELF2-AS1Q8N7Q2 184 aa7.38□□□□□ -1.23
USP47-209ENST00000530041 NETO2Q8NC67 525 aa7.38□□□□□ -1.23
USP47-209ENST00000530041 DACT3Q96B18 629 aaPredicted RBP7.38□□□□□ -1.23
USP47-209ENST00000530041 PFKLP17858 780 aa7.37□□□□□ -1.23
USP47-209ENST00000530041 FBLN1P23142 703 aa7.37□□□□□ -1.23
USP47-209ENST00000530041 IGFBP6P24592 240 aaPredicted RBP7.37□□□□□ -1.23
USP47-209ENST00000530041 TARBP2Q15633 366 aaKnown RBP7.37□□□□□ -1.23
USP47-209ENST00000530041 DDR2Q16832 855 aa7.37□□□□□ -1.23
USP47-209ENST00000530041 E4F1Q66K89 784 aaPredicted RBP7.37□□□□□ -1.23
USP47-209ENST00000530041 CNKSR3Q6P9H4 555 aa7.37□□□□□ -1.23
USP47-209ENST00000530041 FAM129CQ86XR2 697 aa7.37□□□□□ -1.23
USP47-209ENST00000530041 USP33Q8TEY7 942 aa7.37□□□□□ -1.23
USP47-209ENST00000530041 TSPAN17Q96FV3 270 aa7.37□□□□□ -1.23
USP47-209ENST00000530041 CCDC140Q96MF4 163 aa7.37□□□□□ -1.23
USP47-209ENST00000530041 ST7Q9NRC1 585 aa7.37□□□□□ -1.23
USP47-209ENST00000530041 NUDT5Q9UKK9 219 aa7.37□□□□□ -1.23
USP47-209ENST00000530041 AGRPO00253 132 aa7.36□□□□□ -1.23
USP47-209ENST00000530041 CPP00450 1065 aa7.36□□□□□ -1.23
USP47-209ENST00000530041 FUCA1P04066 466 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms