RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 CCDC144BQ3MJ40 725 aa18■□□□□ 0.47
CCDC90B-215ENST00000529745 CCSAPQ6IQ19 270 aaPredicted RBP18■□□□□ 0.47
CCDC90B-215ENST00000529745 RNF207Q6ZRF8 634 aa18■□□□□ 0.47
CCDC90B-215ENST00000529745 CHST3Q7LGC8 479 aa18■□□□□ 0.47
CCDC90B-215ENST00000529745 FBXO11Q86XK2 927 aa18■□□□□ 0.47
CCDC90B-215ENST00000529745 SENP6Q9GZR1 1112 aaPredicted RBP18■□□□□ 0.47
CCDC90B-215ENST00000529745 VTA1Q9NP79 307 aa18■□□□□ 0.47
CCDC90B-215ENST00000529745 PPP4R2Q9NY27 417 aa18■□□□□ 0.47
CCDC90B-215ENST00000529745 ZHX1Q9UKY1 873 aaPredicted RBP18■□□□□ 0.47
CCDC90B-215ENST00000529745 LAMA2P24043 3122 aaKnown RBP18■□□□□ 0.47
CCDC90B-215ENST00000529745 BAZ2BQ9UIF8 2168 aaKnown RBP17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 SH2B2O14492 632 aaPredicted RBP17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 ADCY6O43306 1168 aa17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 PRC1O43663 620 aa17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 DDAH1O94760 285 aa17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 EDNRBP24530 442 aa17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 SMARCA1P28370 1054 aa17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 BMP8BP34820 402 aa17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 GJA9P57773 515 aa17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 RPS6P62753 249 aaKnown RBP17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 SLC30A10Q6XR72 485 aa17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 CATIPQ7Z7H3 387 aa17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 SAMD3Q8N6K7 520 aa17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 PRDM6Q9NQX0 595 aa17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 MRPL11Q9Y3B7 192 aaKnown RBP17.99■□□□□ 0.47
CCDC90B-215ENST00000529745 PRUNE2Q8WUY3 3088 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 PTPDC1A2A3K4 754 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 MOXD2PA6NHM9 499 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 ZBTB5O15062 677 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 EPB41L2O43491 1005 aaKnown RBP17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 PGK1P00558 417 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 CENPBP07199 599 aaPredicted RBP17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 TRAF1Q13077 416 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 SLC35G1Q2M3R5 365 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 USH1GQ495M9 461 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 TAPT1Q6NXT6 567 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 SLC39A5Q6ZMH5 540 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 MCF2L2Q86YR7 1114 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 C7orf61Q8IZ16 206 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 ZNF654Q8IZM8 581 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 KCNB2Q92953 911 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 GDF15Q99988 308 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 AMNQ9BXJ7 453 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 MAP3K20Q9NYL2 800 aaKnown RBP17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 GNEQ9Y223 722 aaKnown RBP17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 Q9Y3F1 56 aa17.98■□□□□ 0.47
CCDC90B-215ENST00000529745 RBM47A0AV96 593 aaKnown RBP17.97■□□□□ 0.47
CCDC90B-215ENST00000529745 CYTH3O43739 400 aa17.97■□□□□ 0.47
CCDC90B-215ENST00000529745 COL9A3Q14050 684 aaPredicted RBP17.97■□□□□ 0.47
CCDC90B-215ENST00000529745 IQSEC1Q6DN90 963 aa17.97■□□□□ 0.47
CCDC90B-215ENST00000529745 SGMS1Q86VZ5 419 aa17.97■□□□□ 0.47
CCDC90B-215ENST00000529745 LENG1Q96BZ8 264 aaPredicted RBP17.97■□□□□ 0.47
CCDC90B-215ENST00000529745 PURBQ96QR8 312 aaKnown RBP17.97■□□□□ 0.47
CCDC90B-215ENST00000529745 DNAH12Q6ZR08 3092 aa17.96■□□□□ 0.47
CCDC90B-215ENST00000529745 OPLAHO14841 1288 aa17.96■□□□□ 0.47
CCDC90B-215ENST00000529745 CTAGE5O15320 804 aa17.96■□□□□ 0.47
CCDC90B-215ENST00000529745 DHX16O60231 1041 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-215ENST00000529745 PPP1R11O60927 126 aaPredicted RBP17.96■□□□□ 0.47
CCDC90B-215ENST00000529745 CALML3P27482 149 aa17.96■□□□□ 0.47
CCDC90B-215ENST00000529745 ADCYAP1R1P41586 468 aa17.96■□□□□ 0.47
CCDC90B-215ENST00000529745 TNFAIP2Q03169 654 aa17.96■□□□□ 0.47
CCDC90B-215ENST00000529745 KRT32Q14532 448 aa17.96■□□□□ 0.47
CCDC90B-215ENST00000529745 MPHOSPH6Q99547 160 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-215ENST00000529745 SPZ1Q9BXG8 430 aa17.96■□□□□ 0.47
CCDC90B-215ENST00000529745 SPC25Q9HBM1 224 aa17.96■□□□□ 0.47
CCDC90B-215ENST00000529745 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 A0A1W2PQ45 241 aaPredicted RBP17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 A0A1W2PQY0 241 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 B4DLN1 442 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 CALM1P0DP23 149 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 CALM2P0DP24 149 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 CALM3P0DP25 149 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 KIF5BP33176 963 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 HSD17B4P51659 736 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 MRPL12P52815 198 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 ACLYP53396 1101 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 RTP1P59025 263 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 EXOSC10Q01780 885 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 LRIT3Q3SXY7 679 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 PCSK9Q8NBP7 692 aaKnown RBP17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 SYTL5Q8TDW5 730 aaPredicted RBP17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 LZTS2Q9BRK4 669 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 VAT1LQ9HCJ6 419 aa17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 GPHNQ9NQX3 736 aaPredicted RBP17.95■□□□□ 0.46
CCDC90B-215ENST00000529745 PNMA6FA0A0J9YX94 578 aa17.94■□□□□ 0.46
CCDC90B-215ENST00000529745 GNAQP50148 359 aa17.94■□□□□ 0.46
CCDC90B-215ENST00000529745 FBXO16Q8IX29 292 aaPredicted RBP17.94■□□□□ 0.46
CCDC90B-215ENST00000529745 RASEFQ8IZ41 740 aa17.94■□□□□ 0.46
CCDC90B-215ENST00000529745 CTCFLQ8NI51 663 aaPredicted RBP17.94■□□□□ 0.46
CCDC90B-215ENST00000529745 TBC1D5Q92609 795 aa17.94■□□□□ 0.46
CCDC90B-215ENST00000529745 ELP1O95163 1332 aa17.94■□□□□ 0.46
CCDC90B-215ENST00000529745 MYADML2A6NDP7 307 aa17.93■□□□□ 0.46
CCDC90B-215ENST00000529745 CCDC69A6NI79 296 aa17.93■□□□□ 0.46
CCDC90B-215ENST00000529745 HMGB1P09429 215 aaKnown RBP17.93■□□□□ 0.46
CCDC90B-215ENST00000529745 C6orf222P0C671 652 aaPredicted RBP17.93■□□□□ 0.46
CCDC90B-215ENST00000529745 SMPD1P17405 629 aa17.93■□□□□ 0.46
CCDC90B-215ENST00000529745 HSPA4P34932 840 aa17.93■□□□□ 0.46
CCDC90B-215ENST00000529745 ATN1P54259 1190 aaPredicted RBP17.93■□□□□ 0.46
CCDC90B-215ENST00000529745 KCNA10Q16322 511 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms