RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 MEIS3Q99687 375 aa12.69□□□□□ -0.38
PPP1CA-206ENST00000529724 NSUN3Q9H649 340 aaKnown RBP12.69□□□□□ -0.38
PPP1CA-206ENST00000529724 MCM9Q9NXL9 1143 aa12.69□□□□□ -0.38
PPP1CA-206ENST00000529724 TRIP12Q14669 1992 aaPredicted RBP12.69□□□□□ -0.38
PPP1CA-206ENST00000529724 CXCL10P02778 98 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 BFSP2Q13515 415 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 LRRFIP1Q32MZ4 808 aaKnown RBP12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 NBPF20Q3BBV1 942 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 EPC2Q52LR7 807 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 FAM47CQ5HY64 1035 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 IQSEC1Q6DN90 963 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 CNKSR3Q6P9H4 555 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 FBXO16Q8IX29 292 aaPredicted RBP12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 CPXCR1Q8N123 301 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 CNTNAP3BQ96NU0 1288 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 CTAGE1Q96RT6 745 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 CNTNAP3Q9BZ76 1288 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 RAVER2Q9HCJ3 691 aaKnown RBP12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 POLR3EQ9NVU0 708 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 SWAP70Q9UH65 585 aa12.68□□□□□ -0.38
PPP1CA-206ENST00000529724 MAP1BP46821 2468 aaKnown RBP12.67□□□□□ -0.38
PPP1CA-206ENST00000529724 ATG2AQ2TAZ0 1938 aa12.67□□□□□ -0.38
PPP1CA-206ENST00000529724 H3BNC9 293 aa12.67□□□□□ -0.38
PPP1CA-206ENST00000529724 GALR2O43603 387 aaPredicted RBP12.67□□□□□ -0.38
PPP1CA-206ENST00000529724 SIGLEC14Q08ET2 396 aa12.67□□□□□ -0.38
PPP1CA-206ENST00000529724 SMAD4Q13485 552 aaKnown RBP12.67□□□□□ -0.38
PPP1CA-206ENST00000529724 CCDC158Q5M9N0 1113 aa12.67□□□□□ -0.38
PPP1CA-206ENST00000529724 CHST13Q8NET6 341 aa12.67□□□□□ -0.38
PPP1CA-206ENST00000529724 CRBNQ96SW2 442 aa12.67□□□□□ -0.38
PPP1CA-206ENST00000529724 GOPCQ9HD26 462 aa12.67□□□□□ -0.38
PPP1CA-206ENST00000529724 FBXO40Q9UH90 709 aa12.67□□□□□ -0.38
PPP1CA-206ENST00000529724 HDAC5Q9UQL6 1122 aa12.67□□□□□ -0.38
PPP1CA-206ENST00000529724 MYH8P13535 1937 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 ABHD14A-ACY1A0A1B0GW23 586 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 ASB14A6NK59 587 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 LOC730098B7Z3J9 87 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 NBNO60934 754 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 TBX10O75333 385 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 MYL3P08590 195 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 NUBP1P53384 320 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 HTRA4P83105 476 aaPredicted RBP12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 GPM6BQ13491 265 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 CBX2Q14781 532 aaPredicted RBP12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 NFRKBQ6P4R8 1299 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 EEPD1Q7L9B9 569 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 ADSSL1Q8N142 457 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 AFAP1L1Q8TED9 768 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 RMDN1Q96DB5 314 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 MTG1Q9BT17 334 aaPredicted RBP12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 SLC38A10Q9HBR0 1119 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 INSL6Q9Y581 213 aa12.66□□□□□ -0.38
PPP1CA-206ENST00000529724 NCK2O43639 380 aa12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 RAD21O60216 631 aa12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 HYAL1Q12794 435 aa12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 DUSP28Q4G0W2 176 aa12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 TNNI3KQ59H18 835 aa12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 LRRC8DQ7L1W4 858 aa12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 PRPF38AQ8NAV1 312 aaKnown RBP12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 DHX38Q92620 1227 aaKnown RBP12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 CCDC17Q96LX7 622 aa12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 ANTXR1Q9H6X2 564 aa12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 DCP1AQ9NPI6 582 aaPredicted RBP12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 GPR108Q9NPR9 543 aa12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 A1CFQ9NQ94 594 aaKnown RBP12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 FPGT-TNNI3KV9GXZ4 949 aa12.65□□□□□ -0.38
PPP1CA-206ENST00000529724 ZBED4O75132 1171 aa12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 KDM4AO75164 1064 aa12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 PDGFBP01127 241 aaPredicted RBP12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 SELPP16109 830 aa12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 PTPN11Q06124 597 aaPredicted RBP12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 RBL2Q08999 1139 aa12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 MKRN4PQ13434 485 aaPredicted RBP12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.64□□□□□ -0.391e-6■■■■□ 19.9
PPP1CA-206ENST00000529724 FRMD5Q7Z6J6 570 aa12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 CAGE1Q8TC20 777 aa12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 SDR42E1Q8WUS8 393 aa12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 SAMD11Q96NU1 681 aa12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 KANSL2Q9H9L4 492 aa12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 HOMER2Q9NSB8 354 aa12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 CD207Q9UJ71 328 aa12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 MICAL3Q7RTP6 2002 aa12.64□□□□□ -0.39
PPP1CA-206ENST00000529724 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 MAGEB6P1A0A0J9YX57 407 aa12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 LINC01565O15544 149 aa12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 EFCAB14O75071 495 aa12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 NDUFB10O96000 172 aa12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 GTF2F1P35269 517 aaKnown RBP eCLIP12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 CDK8P49336 464 aa12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 OAZ1P54368 228 aa12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 G3BP1Q13283 466 aaKnown RBP eCLIP12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 KIAA1211Q6ZU35 1233 aa12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 DGLUCYQ7Z3D6 616 aa12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 FBXO11Q86XK2 927 aa12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 NKD2Q969F2 451 aaPredicted RBP12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 CRNKL1Q9BZJ0 848 aaKnown RBP12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 VTA1Q9NP79 307 aa12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 NOD1Q9Y239 953 aa12.63□□□□□ -0.39
PPP1CA-206ENST00000529724 PNMA6EA0A0J9YXQ4 647 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms