RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 MYH6P13533 1939 aa18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 KLF18A0A0U1RQI7 1052 aa18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 ASB14A6NK59 587 aa18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 ZBTB43O43298 467 aa18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 CALML3P27482 149 aa18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 RCAN1P53805 252 aa18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 ANO1Q5XXA6 986 aa18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 SYNE3Q6ZMZ3 975 aa18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 SYTL5Q8TDW5 730 aaPredicted RBP18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 IL17RAQ96F46 866 aa18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 PAWRQ96IZ0 340 aaKnown RBP18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 ABHD16BQ9H3Z7 469 aa18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 COL20A1Q9P218 1284 aa18.7■□□□□ 0.58
TSPAN4-218ENST00000529566 LOC102724159A0A0B4J2E5 919 aa18.69■□□□□ 0.58
TSPAN4-218ENST00000529566 ADCY6O43306 1168 aa18.69■□□□□ 0.58
TSPAN4-218ENST00000529566 ALDH5A1P51649 535 aaPredicted RBP18.69■□□□□ 0.58
TSPAN4-218ENST00000529566 HSD17B4P51659 736 aa18.69■□□□□ 0.58
TSPAN4-218ENST00000529566 EVCP57679 992 aa18.69■□□□□ 0.58
TSPAN4-218ENST00000529566 APOBRQ0VD83 1088 aa18.69■□□□□ 0.58
TSPAN4-218ENST00000529566 PWP2Q15269 919 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-218ENST00000529566 C8orf34Q49A92 452 aa18.69■□□□□ 0.58
TSPAN4-218ENST00000529566 MCF2L2Q86YR7 1114 aa18.69■□□□□ 0.58
TSPAN4-218ENST00000529566 PIBF1Q8WXW3 757 aa18.69■□□□□ 0.58
TSPAN4-218ENST00000529566 BRF1Q92994 677 aa18.69■□□□□ 0.58
TSPAN4-218ENST00000529566 ADD3Q9UEY8 706 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-218ENST00000529566 PDE4DIPQ5VU43 2346 aa18.68■□□□□ 0.58
TSPAN4-218ENST00000529566 FRMPD3Q5JV73 1810 aa18.68■□□□□ 0.58
TSPAN4-218ENST00000529566 COL6A1P12109 1028 aa18.68■□□□□ 0.58
TSPAN4-218ENST00000529566 EDNRBP24530 442 aa18.68■□□□□ 0.58
TSPAN4-218ENST00000529566 CDC27P30260 824 aa18.68■□□□□ 0.58
TSPAN4-218ENST00000529566 TOB2Q14106 344 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-218ENST00000529566 DNERQ8NFT8 737 aa18.68■□□□□ 0.58
TSPAN4-218ENST00000529566 RRP36Q96EU6 259 aaKnown RBP18.68■□□□□ 0.58
TSPAN4-218ENST00000529566 ZHX1Q9UKY1 873 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-218ENST00000529566 FAM184BQ9ULE4 1060 aa18.68■□□□□ 0.58
TSPAN4-218ENST00000529566 CYP46A1Q9Y6A2 500 aa18.68■□□□□ 0.58
TSPAN4-218ENST00000529566 AKR1A1P14550 325 aa18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 ANAPC15P60006 121 aa18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 FGD1P98174 961 aa18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 TRAF1Q13077 416 aa18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 RTN1Q16799 776 aa18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 CCDC144BQ3MJ40 725 aa18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 TAPT1Q6NXT6 567 aa18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 NECAB2Q7Z6G3 386 aa18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 CCDC82Q8N4S0 544 aa18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 LENG1Q96BZ8 264 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 TAAR1Q96RJ0 339 aa18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 UPF3BQ9BZI7 483 aaKnown RBP18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 RBM28Q9NW13 759 aaKnown RBP18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 NID2Q14112 1375 aa18.67■□□□□ 0.58
TSPAN4-218ENST00000529566 hCG_1642624A0A1W2PR95 340 aa18.66■□□□□ 0.58
TSPAN4-218ENST00000529566 GOLGA8AA7E2F4 631 aa18.66■□□□□ 0.58
TSPAN4-218ENST00000529566 GOLGA8BA8MQT2 603 aa18.66■□□□□ 0.58
TSPAN4-218ENST00000529566 RARBP10826 455 aa18.66■□□□□ 0.58
TSPAN4-218ENST00000529566 SAMD3Q8N6K7 520 aa18.66■□□□□ 0.58
TSPAN4-218ENST00000529566 PDGFCQ9NRA1 345 aa18.66■□□□□ 0.58
TSPAN4-218ENST00000529566 MAP3K20Q9NYL2 800 aaKnown RBP18.66■□□□□ 0.58
TSPAN4-218ENST00000529566 DNM1LO00429 736 aa18.65■□□□□ 0.58
TSPAN4-218ENST00000529566 EIF5BO60841 1220 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-218ENST00000529566 CFBP00751 764 aa18.65■□□□□ 0.58
TSPAN4-218ENST00000529566 PDIA3P30101 505 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-218ENST00000529566 ADD1P35611 737 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-218ENST00000529566 PPP2R5BQ15173 497 aa18.65■□□□□ 0.58
TSPAN4-218ENST00000529566 LRRC41Q15345 812 aa18.65■□□□□ 0.58
TSPAN4-218ENST00000529566 GJC2Q5T442 439 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-218ENST00000529566 FBXO16Q8IX29 292 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-218ENST00000529566 ARRDC4Q8NCT1 418 aa18.65■□□□□ 0.58
TSPAN4-218ENST00000529566 C11orf49Q9H6J7 331 aa18.65■□□□□ 0.58
TSPAN4-218ENST00000529566 CNTNAP5Q8WYK1 1306 aa18.65■□□□□ 0.58
TSPAN4-218ENST00000529566 LRRC37A2A6NM11 1700 aa18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 RBM47A0AV96 593 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 ADAMTS4O75173 837 aa18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 DUSP11O75319 330 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 HOXA13P31271 388 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 METAP2P50579 478 aaKnown RBP eCLIP18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 TMEM63BQ5T3F8 832 aa18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 EEPD1Q7L9B9 569 aa18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 NSUN6Q8TEA1 469 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 RMDN3Q96TC7 470 aa18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 VTA1Q9NP79 307 aa18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 XPNPEP3Q9NQH7 507 aa18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 SEC63Q9UGP8 760 aaKnown RBP18.64■□□□□ 0.57
TSPAN4-218ENST00000529566 CTAGE5O15320 804 aa18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 PGK1P00558 417 aa18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 SMPD1P17405 629 aa18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 ADCYAP1R1P41586 468 aa18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 NKX3-2P78367 333 aa18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 IQSEC1Q6DN90 963 aa18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 CCSAPQ6IQ19 270 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 KLHDC9Q8NEP7 349 aa18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 IWS1Q96ST2 819 aa18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 UPF3AQ9H1J1 476 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 ALDH8A1Q9H2A2 487 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 PXMP2Q9NR77 195 aa18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 PDRG1Q9NUG6 133 aa18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 GNEQ9Y223 722 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 V9GY48 417 aaPredicted RBP18.63■□□□□ 0.57
TSPAN4-218ENST00000529566 DNAH12Q6ZR08 3092 aa18.62■□□□□ 0.57
TSPAN4-218ENST00000529566 GCOM1H8Y6P7 765 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms