RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 ZNF713Q8N859 430 aaPredicted RBP13.14□□□□□ -0.31
CHD7-209ENST00000529472 RAET1EQ8TD07 263 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 TBC1D5Q92609 795 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 PURBQ96QR8 312 aaKnown RBP13.14□□□□□ -0.31
CHD7-209ENST00000529472 APBA2Q99767 749 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 LLPHQ9BRT6 129 aaKnown RBP13.14□□□□□ -0.31
CHD7-209ENST00000529472 GJD2Q9UKL4 321 aa13.14□□□□□ -0.31
CHD7-209ENST00000529472 GCOM1H8Y6P7 765 aaPredicted RBP13.13□□□□□ -0.31
CHD7-209ENST00000529472 POLR2MP0CAP2 368 aa13.13□□□□□ -0.31
CHD7-209ENST00000529472 FDPSP14324 419 aaKnown RBP13.13□□□□□ -0.31
CHD7-209ENST00000529472 ADCY7P51828 1080 aa13.13□□□□□ -0.31
CHD7-209ENST00000529472 CNTN2Q02246 1040 aa13.13□□□□□ -0.31
CHD7-209ENST00000529472 SMARCC2Q8TAQ2 1214 aa13.13□□□□□ -0.31
CHD7-209ENST00000529472 NPLOC4Q8TAT6 608 aa13.13□□□□□ -0.31
CHD7-209ENST00000529472 CCDC12Q8WUD4 166 aaPredicted RBP13.13□□□□□ -0.31
CHD7-209ENST00000529472 WASF1Q92558 559 aa13.13□□□□□ -0.31
CHD7-209ENST00000529472 USP6NLQ92738 828 aa13.13□□□□□ -0.31
CHD7-209ENST00000529472 CUL5Q93034 780 aa13.13□□□□□ -0.31
CHD7-209ENST00000529472 SHISA4Q96DD7 197 aa13.13□□□□□ -0.31
CHD7-209ENST00000529472 PSTPIP2Q9H939 334 aa13.13□□□□□ -0.31
CHD7-209ENST00000529472 PTCH2Q9Y6C5 1203 aa13.13□□□□□ -0.31
CHD7-209ENST00000529472 DNAJC25-GNG10A0A024R161 153 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 SMCO2A6NFE2 343 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 ELNP15502 786 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 HSD17B4P51659 736 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 PRMT2P55345 433 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 HMGN5P82970 282 aaKnown RBP13.12□□□□□ -0.31
CHD7-209ENST00000529472 CCL14Q16627 93 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 UBE2SQ16763 222 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 USP17L6PQ6QN14 398 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 FCHSD1Q86WN1 690 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 FAM184AQ8NB25 1140 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 CCDC148Q8NFR7 591 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 SYTL5Q8TDW5 730 aaPredicted RBP13.12□□□□□ -0.31
CHD7-209ENST00000529472 ALG1Q9BT22 464 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 GJB4Q9NTQ9 266 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 FOXD4L1Q9NU39 408 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 SLC5A4Q9NY91 659 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 COL20A1Q9P218 1284 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 PTPN22Q9Y2R2 807 aa13.12□□□□□ -0.31
CHD7-209ENST00000529472 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.12□□□□□ -0.31
CHD7-209ENST00000529472 DNAH12Q6ZR08 3092 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 HOXC6P09630 235 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 NLRP5P59047 1200 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 IRF5Q13568 498 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 CUL4AQ13619 759 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 ZNF792Q3KQV3 632 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 FAM133AQ8N9E0 248 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 MAML3Q96JK9 1138 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 FGD4Q96M96 766 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 RIC8AQ9NPQ8 531 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 SH3GLB2Q9NR46 395 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 FLRT1Q9NZU1 646 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 KCNJ14Q9UNX9 436 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 SMC3Q9UQE7 1217 aa13.11□□□□□ -0.31
CHD7-209ENST00000529472 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
CHD7-209ENST00000529472 SOWAHBA6NEL2 793 aa13.1□□□□□ -0.31
CHD7-209ENST00000529472 MEIS2O14770 477 aa13.1□□□□□ -0.31
CHD7-209ENST00000529472 ADCY3O60266 1144 aa13.1□□□□□ -0.31
CHD7-209ENST00000529472 HSP90AA1P07900 732 aaKnown RBP13.1□□□□□ -0.31
CHD7-209ENST00000529472 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
CHD7-209ENST00000529472 XBP1P17861 261 aa13.1□□□□□ -0.31
CHD7-209ENST00000529472 GJB2P29033 226 aa13.1□□□□□ -0.31
CHD7-209ENST00000529472 MRPL12P52815 198 aaKnown RBP13.1□□□□□ -0.31
CHD7-209ENST00000529472 GHRHRQ02643 423 aa13.1□□□□□ -0.31
CHD7-209ENST00000529472 TRIM29Q14134 588 aa13.1□□□□□ -0.31
CHD7-209ENST00000529472 ZMYND12Q9H0C1 365 aa13.1□□□□□ -0.31
CHD7-209ENST00000529472 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
CHD7-209ENST00000529472 MCM3APO60318 1980 aa13.1□□□□□ -0.31
CHD7-209ENST00000529472 ASTN1O14525 1302 aa13.1□□□□□ -0.31
CHD7-209ENST00000529472 ESYT2A0FGR8 921 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 PIK3CDO00329 1044 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 ADAMTS3O15072 1205 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 EIF2AK2P19525 551 aaKnown RBP13.09□□□□□ -0.31
CHD7-209ENST00000529472 GNA11P29992 359 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 ALDH5A1P51649 535 aaPredicted RBP13.09□□□□□ -0.31
CHD7-209ENST00000529472 GUCY1B3Q02153 619 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 PKN2Q16513 984 aaKnown RBP13.09□□□□□ -0.31
CHD7-209ENST00000529472 SLC9C1Q4G0N8 1177 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 FBXO46Q6PJ61 603 aaPredicted RBP13.09□□□□□ -0.31
CHD7-209ENST00000529472 REXO1Q8N1G1 1221 aaKnown RBP13.09□□□□□ -0.31
CHD7-209ENST00000529472 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 SH3TC2Q8TF17 1288 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 TRIB2Q92519 343 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 C8orf76Q96K31 380 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 TAAR1Q96RJ0 339 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 RMDN3Q96TC7 470 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 GLT8D2Q9H1C3 349 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 TMEM260Q9NX78 707 aa13.09□□□□□ -0.31
CHD7-209ENST00000529472 MAP3K20Q9NYL2 800 aaKnown RBP13.09□□□□□ -0.31
CHD7-209ENST00000529472 BIN2Q9UBW5 565 aaPredicted RBP13.09□□□□□ -0.31
CHD7-209ENST00000529472 ADD3Q9UEY8 706 aaKnown RBP13.09□□□□□ -0.31
CHD7-209ENST00000529472 DIS3Q9Y2L1 958 aaKnown RBP13.09□□□□□ -0.31
CHD7-209ENST00000529472 SPDYE3A6NKU9 549 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 GRK4P32298 578 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 CYP2C19P33261 490 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 UBXN2AP68543 259 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 BECN1Q14457 450 aa13.08□□□□□ -0.32
CHD7-209ENST00000529472 ARHGEF16Q5VV41 709 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms