RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 TFAP4Q01664 338 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 RAB30Q15771 203 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 CCDC85BQ15834 202 aaPredicted RBP7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 FSCN1Q16658 493 aaKnown RBP7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 TKFCQ3LXA3 575 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 IQSEC1Q6DN90 963 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 RCSD1Q6JBY9 416 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 NOL8Q76FK4 1167 aaKnown RBP7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 FAM160B2Q86V87 743 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 IFNLR1Q8IU57 520 aaPredicted RBP7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 MORC4Q8TE76 937 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 GMCL1Q96IK5 515 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 TRERF1Q96PN7 1200 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 SEC62Q99442 399 aaKnown RBP7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 NOC4LQ9BVI4 516 aaKnown RBP7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 TMEM121BQ9BXQ6 578 aaPredicted RBP7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 SEZ6LQ9BYH1 1024 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 TRPV6Q9H1D0 765 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 WNT8AQ9H1J5 351 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 NKX2-4Q9H2Z4 354 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 HIPK3Q9H422 1215 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 RNF146Q9NTX7 359 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 THEGQ9P2T0 379 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 Q9Y3F1 56 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 PCDHB15Q9Y5E8 787 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 DDX49Q9Y6V7 483 aaKnown RBP7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 LCTP09848 1927 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 PLIN4Q96Q06 1357 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 SCN5AQ14524 2016 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 TRIP12Q14669 1992 aaPredicted RBP7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 ZEB2O60315 1214 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 ALAS1P13196 640 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 IGFBP4P22692 258 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 SLC1A4P43007 532 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 STAT2P52630 851 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 RABGGTBP53611 331 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 SNAP25P60880 206 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 PDE4BQ07343 736 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 PPARAQ07869 468 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 MUM1L1Q5H9M0 696 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 TSHZ3Q63HK5 1081 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 KCTD1Q719H9 257 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 EEPD1Q7L9B9 569 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 OTOP2Q7RTS6 562 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 TLK2Q86UE8 772 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 RPUSD2Q8IZ73 545 aaKnown RBP7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 SPOCK2Q92563 424 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 CHMP4CQ96CF2 233 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 PURBQ96QR8 312 aaKnown RBP7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 AP5M1Q9H0R1 490 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 SLC28A3Q9HAS3 691 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 INCENPQ9NQS7 918 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 IL17RBQ9NRM6 502 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 CYP39A1Q9NYL5 469 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 PRR12Q9ULL5 1215 aa7.34□□□□□ -1.23
CHRNA6-202ENST00000529467 TET1Q8NFU7 2136 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 FOXP2O15409 715 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 BMP1P13497 986 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 MYOGP15173 224 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 NOVP48745 357 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 PSEN1P49768 467 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 PSMC6P62333 389 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 DUSP28Q4G0W2 176 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 ZMYM1Q5SVZ6 1142 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 KIAA1211Q6ZU35 1233 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 FBXO16Q8IX29 292 aaPredicted RBP7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 ADAMTS19Q8TE59 1207 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 SCLYQ96I15 445 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 GPATCH3Q96I76 525 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 NACAP1Q9BZK3 213 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 NAPBQ9H115 298 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 ALDH8A1Q9H2A2 487 aaPredicted RBP7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 MTIF3Q9H2K0 278 aaKnown RBP7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 VTA1Q9NP79 307 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 RAPGEFL1Q9UHV5 662 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 PCDHA11Q9Y5I1 949 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 SLC4A7Q9Y6M7 1214 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 NCOR1O75376 2440 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 PRRC2BQ5JSZ5 2229 aaKnown RBP7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 SCN10AQ9Y5Y9 1956 aa7.33□□□□□ -1.24
CHRNA6-202ENST00000529467 LRRC37A2A6NM11 1700 aa7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 RBM47A0AV96 593 aaKnown RBP7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 SNPHO15079 494 aa7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 NMT2O60551 498 aa7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 IGHDP01880 384 aa7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 ICAM1P05362 532 aa7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 SLC3A2P08195 630 aaKnown RBP7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 FGRP09769 529 aa7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 CYP2C9P11712 490 aa7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 POU3F3P20264 500 aaPredicted RBP7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 PURAQ00577 322 aaKnown RBP7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 CTDSPL2Q05D32 466 aa7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 IKQ13123 557 aaPredicted RBP7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 PDAP1Q13442 181 aaKnown RBP7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 BAATQ14032 418 aaPredicted RBP7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 TTLL4Q14679 1199 aa7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 LRRFIP1Q32MZ4 808 aaKnown RBP7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 PPP4R3BQ5MIZ7 849 aa7.32□□□□□ -1.24
CHRNA6-202ENST00000529467 TTBK2Q6IQ55 1244 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms