RNA–Protein interactions for RNA: ENST00000528942.1

CCDC18-210, Transcript of coiled-coil domain containing 18, humanhuman

TSL 4

Gene CCDC18, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-210ENST00000528942 FAM184BQ9ULE4 1060 aa17.29■□□□□ 0.36
CCDC18-210ENST00000528942 PCDHA1Q9Y5I3 950 aa17.29■□□□□ 0.36
CCDC18-210ENST00000528942 ALPK3Q96L96 1907 aa17.28■□□□□ 0.36
CCDC18-210ENST00000528942 KBTBD13C9JR72 458 aa17.28■□□□□ 0.36
CCDC18-210ENST00000528942 EIF5BO60841 1220 aaKnown RBP17.28■□□□□ 0.36
CCDC18-210ENST00000528942 CASTP20810 708 aaKnown RBP17.28■□□□□ 0.36
CCDC18-210ENST00000528942 SMARCA1P28370 1054 aa17.28■□□□□ 0.36
CCDC18-210ENST00000528942 ALDH5A1P51649 535 aaPredicted RBP17.28■□□□□ 0.36
CCDC18-210ENST00000528942 RAB11FIP4Q86YS3 637 aa17.28■□□□□ 0.36
CCDC18-210ENST00000528942 ARRDC4Q8NCT1 418 aa17.28■□□□□ 0.36
CCDC18-210ENST00000528942 DNERQ8NFT8 737 aa17.28■□□□□ 0.36
CCDC18-210ENST00000528942 RRP36Q96EU6 259 aaKnown RBP17.28■□□□□ 0.36
CCDC18-210ENST00000528942 PURBQ96QR8 312 aaKnown RBP17.28■□□□□ 0.36
CCDC18-210ENST00000528942 ZBTB43O43298 467 aa17.27■□□□□ 0.36
CCDC18-210ENST00000528942 PLEKHA8P1O95397 391 aa17.27■□□□□ 0.36
CCDC18-210ENST00000528942 COL6A1P12109 1028 aa17.27■□□□□ 0.36
CCDC18-210ENST00000528942 CPA1P15085 419 aa17.27■□□□□ 0.36
CCDC18-210ENST00000528942 RPS6KB1P23443 525 aa17.27■□□□□ 0.36
CCDC18-210ENST00000528942 CCDC144BQ3MJ40 725 aa17.27■□□□□ 0.36
CCDC18-210ENST00000528942 TMTC3Q6ZXV5 915 aa17.27■□□□□ 0.36
CCDC18-210ENST00000528942 FANCBQ8NB91 859 aa17.27■□□□□ 0.36
CCDC18-210ENST00000528942 MORC4Q8TE76 937 aa17.27■□□□□ 0.36
CCDC18-210ENST00000528942 LENG1Q96BZ8 264 aaPredicted RBP17.27■□□□□ 0.36
CCDC18-210ENST00000528942 KATNBL1Q9H079 304 aa17.27■□□□□ 0.36
CCDC18-210ENST00000528942 RBM28Q9NW13 759 aaKnown RBP17.27■□□□□ 0.36
CCDC18-210ENST00000528942 SYNRGQ9UMZ2 1314 aa17.26■□□□□ 0.35
CCDC18-210ENST00000528942 KLF18A0A0U1RQI7 1052 aa17.26■□□□□ 0.35
CCDC18-210ENST00000528942 B4DLN1 442 aa17.26■□□□□ 0.35
CCDC18-210ENST00000528942 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
CCDC18-210ENST00000528942 MRPL12P52815 198 aaKnown RBP17.26■□□□□ 0.35
CCDC18-210ENST00000528942 RCAN1P53805 252 aa17.26■□□□□ 0.35
CCDC18-210ENST00000528942 PRPF38BQ5VTL8 546 aaKnown RBP17.26■□□□□ 0.35
CCDC18-210ENST00000528942 RNF180Q86T96 592 aa17.26■□□□□ 0.35
CCDC18-210ENST00000528942 FBXO16Q8IX29 292 aaPredicted RBP17.26■□□□□ 0.35
CCDC18-210ENST00000528942 PIBF1Q8WXW3 757 aa17.26■□□□□ 0.35
CCDC18-210ENST00000528942 DPF3Q92784 378 aa17.26■□□□□ 0.35
CCDC18-210ENST00000528942 VTA1Q9NP79 307 aa17.26■□□□□ 0.35
CCDC18-210ENST00000528942 BRPF3Q9ULD4 1205 aa17.26■□□□□ 0.35
CCDC18-210ENST00000528942 GOLGA8BA8MQT2 603 aa17.25■□□□□ 0.35
CCDC18-210ENST00000528942 OPLAHO14841 1288 aa17.25■□□□□ 0.35
CCDC18-210ENST00000528942 DUSP11O75319 330 aaKnown RBP17.25■□□□□ 0.35
CCDC18-210ENST00000528942 CFBP00751 764 aa17.25■□□□□ 0.35
CCDC18-210ENST00000528942 HSD17B4P51659 736 aa17.25■□□□□ 0.35
CCDC18-210ENST00000528942 GHRHRQ02643 423 aa17.25■□□□□ 0.35
CCDC18-210ENST00000528942 PDE4DQ08499 809 aa17.25■□□□□ 0.35
CCDC18-210ENST00000528942 LRRC41Q15345 812 aa17.25■□□□□ 0.35
CCDC18-210ENST00000528942 RTN1Q16799 776 aa17.25■□□□□ 0.35
CCDC18-210ENST00000528942 GJC2Q5T442 439 aaPredicted RBP17.25■□□□□ 0.35
CCDC18-210ENST00000528942 Q6ZUG5 572 aa17.25■□□□□ 0.35
CCDC18-210ENST00000528942 FBXL16Q8N461 479 aa17.25■□□□□ 0.35
CCDC18-210ENST00000528942 SRBD1Q8N5C6 995 aaKnown RBP17.25■□□□□ 0.35
CCDC18-210ENST00000528942 SYTL5Q8TDW5 730 aaPredicted RBP17.25■□□□□ 0.35
CCDC18-210ENST00000528942 BRF1Q92994 677 aa17.25■□□□□ 0.35
CCDC18-210ENST00000528942 NAP1L2Q9ULW6 460 aaPredicted RBP17.25■□□□□ 0.35
CCDC18-210ENST00000528942 DDX49Q9Y6V7 483 aaKnown RBP17.25■□□□□ 0.35
CCDC18-210ENST00000528942 GOLGA8AA7E2F4 631 aa17.24■□□□□ 0.35
CCDC18-210ENST00000528942 PGK1P00558 417 aa17.24■□□□□ 0.35
CCDC18-210ENST00000528942 EDNRBP24530 442 aa17.24■□□□□ 0.35
CCDC18-210ENST00000528942 RUFY3Q7L099 469 aa17.24■□□□□ 0.35
CCDC18-210ENST00000528942 EEPD1Q7L9B9 569 aa17.24■□□□□ 0.35
CCDC18-210ENST00000528942 CMTR1Q8N1G2 835 aaKnown RBP17.24■□□□□ 0.35
CCDC18-210ENST00000528942 SAMD3Q8N6K7 520 aa17.24■□□□□ 0.35
CCDC18-210ENST00000528942 NSUN6Q8TEA1 469 aaKnown RBP17.24■□□□□ 0.35
CCDC18-210ENST00000528942 MAP3K20Q9NYL2 800 aaKnown RBP17.24■□□□□ 0.35
CCDC18-210ENST00000528942 CYP46A1Q9Y6A2 500 aa17.24■□□□□ 0.35
CCDC18-210ENST00000528942 ADCY6O43306 1168 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 EVI5O60447 810 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 ADAMTS4O75173 837 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 TNFAIP2Q03169 654 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 APOBRQ0VD83 1088 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 TBC1D5Q92609 795 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 RMDN3Q96TC7 470 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 AGXT2Q9BYV1 514 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 TM6SF1Q9BZW5 370 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 SPC25Q9HBM1 224 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 ZSWIM6Q9HCJ5 1215 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 COL20A1Q9P218 1284 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 NID2Q14112 1375 aa17.23■□□□□ 0.35
CCDC18-210ENST00000528942 CNTNAP5Q8WYK1 1306 aa17.22■□□□□ 0.35
CCDC18-210ENST00000528942 CCDC196A0A1B0GTZ2 297 aa17.22■□□□□ 0.35
CCDC18-210ENST00000528942 ADCYAP1R1P41586 468 aa17.22■□□□□ 0.35
CCDC18-210ENST00000528942 METAP2P50579 478 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC18-210ENST00000528942 PPP2R5BQ15173 497 aa17.22■□□□□ 0.35
CCDC18-210ENST00000528942 ARHGEF16Q5VV41 709 aa17.22■□□□□ 0.35
CCDC18-210ENST00000528942 TAPT1Q6NXT6 567 aa17.22■□□□□ 0.35
CCDC18-210ENST00000528942 NOL8Q76FK4 1167 aaKnown RBP17.22■□□□□ 0.35
CCDC18-210ENST00000528942 TLK2Q86UE8 772 aa17.22■□□□□ 0.35
CCDC18-210ENST00000528942 CCDC82Q8N4S0 544 aa17.22■□□□□ 0.35
CCDC18-210ENST00000528942 IWS1Q96ST2 819 aa17.22■□□□□ 0.35
CCDC18-210ENST00000528942 SENP6Q9GZR1 1112 aaPredicted RBP17.22■□□□□ 0.35
CCDC18-210ENST00000528942 UPF3AQ9H1J1 476 aaKnown RBP17.22■□□□□ 0.35
CCDC18-210ENST00000528942 NR2E3Q9Y5X4 410 aa17.22■□□□□ 0.35
CCDC18-210ENST00000528942 KIAA1217Q5T5P2 1943 aa17.21■□□□□ 0.35
CCDC18-210ENST00000528942 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.21■□□□□ 0.35
CCDC18-210ENST00000528942 GCOM1H8Y6P7 765 aaPredicted RBP17.21■□□□□ 0.35
CCDC18-210ENST00000528942 C6orf222P0C671 652 aaPredicted RBP17.21■□□□□ 0.35
CCDC18-210ENST00000528942 POLR2MP0CAP2 368 aa17.21■□□□□ 0.35
CCDC18-210ENST00000528942 EIF2AK2P19525 551 aaKnown RBP17.21■□□□□ 0.35
CCDC18-210ENST00000528942 CST5P28325 142 aaPredicted RBP17.21■□□□□ 0.35
CCDC18-210ENST00000528942 HOXA13P31271 388 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms