RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 GAKO14976 1311 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 B4DLN1 442 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 TULP2O00295 520 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 SLC26A4O43511 780 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 KRT86O43790 486 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 RPS6KA5O75582 802 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 FGFR1OPO95684 399 aaKnown RBP9.35□□□□□ -0.91
CSTF3-208ENST00000528865 AARSP49588 968 aaKnown RBP eCLIP9.35□□□□□ -0.91
CSTF3-208ENST00000528865 VAV2P52735 878 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 NAPAP54920 295 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 RHBDL3P58872 404 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 ITIH3Q06033 890 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 EHHADHQ08426 723 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 PSMD2Q13200 908 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 GRB10Q13322 594 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 CASP8Q14790 479 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 DIXDC1Q155Q3 683 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 CCDC122Q5T0U0 273 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 SOGA3Q5TF21 947 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 UNC13DQ70J99 1090 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 SV2BQ7L1I2 683 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 MAPKAPK5Q8IW41 473 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 GUF1Q8N442 669 aaKnown RBP9.35□□□□□ -0.91
CSTF3-208ENST00000528865 SLC44A5Q8NCS7 719 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 RASSF8Q8NHQ8 419 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 FAM71BQ8TC56 605 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 CERKQ8TCT0 537 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 SNED1Q8TER0 1413 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 JAKMIP2Q96AA8 810 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 CALML4Q96GE6 196 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 CNOT6LQ96LI5 555 aaKnown RBP9.35□□□□□ -0.91
CSTF3-208ENST00000528865 PLIN2Q99541 437 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 NOC4LQ9BVI4 516 aaKnown RBP9.35□□□□□ -0.91
CSTF3-208ENST00000528865 TSGA10Q9BZW7 698 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 LRRC27Q9C0I9 530 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 LACRTQ9GZZ8 138 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 DNAJC5Q9H3Z4 198 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 NHEJ1Q9H9Q4 299 aaPredicted RBP9.35□□□□□ -0.91
CSTF3-208ENST00000528865 PDE11AQ9HCR9 933 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 CD209Q9NNX6 404 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 BLOC1S4Q9NUP1 217 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 TRIM10Q9UDY6 481 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 SIK3Q9Y2K2 1263 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 RTCBQ9Y3I0 505 aaKnown RBP9.35□□□□□ -0.91
CSTF3-208ENST00000528865 PLIN4Q96Q06 1357 aa9.35□□□□□ -0.91
CSTF3-208ENST00000528865 IGKV6D-41A0A0C4DH26 115 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 RCCD1A6NED2 376 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 PJA2O43164 708 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 CCNT1O60563 726 aaKnown RBP9.34□□□□□ -0.91
CSTF3-208ENST00000528865 TFRCP02786 760 aaKnown RBP9.34□□□□□ -0.91
CSTF3-208ENST00000528865 ATP1A1P05023 1023 aaKnown RBP9.34□□□□□ -0.91
CSTF3-208ENST00000528865 RHOXF2BP0C7M4 288 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 SNHG28P0DPA3 235 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 FCER1AP12319 257 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 TECP42680 631 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 BTDP43251 543 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 MTIF2P46199 727 aaKnown RBP9.34□□□□□ -0.91
CSTF3-208ENST00000528865 KCNQ4P56696 695 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 ASIC1P78348 528 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 LETM2Q2VYF4 491 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 TMEM119Q4V9L6 283 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 VWA3BQ502W6 1294 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 FKBP15Q5T1M5 1219 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 NCAPH2Q6IBW4 605 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 SMIM5Q71RC9 77 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 SLF2Q8IX21 1173 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 PIAS4Q8N2W9 510 aaPredicted RBP9.34□□□□□ -0.91
CSTF3-208ENST00000528865 FNBP4Q8N3X1 1017 aaPredicted RBP9.34□□□□□ -0.91
CSTF3-208ENST00000528865 MMGT1Q8N4V1 131 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 KIAA0895Q8NCT3 520 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 TBCKQ8TEA7 893 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 RUBCNQ92622 972 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 MMS19Q96T76 1030 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 RHOXF2Q9BQY4 288 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 MED4Q9NPJ6 270 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 STX8Q9UNK0 236 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 PLAGL2Q9UPG8 496 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 JAG2Q9Y219 1238 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 MYH8P13535 1937 aa9.34□□□□□ -0.91
CSTF3-208ENST00000528865 ERICH4A6NGS2 130 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 MYMKA6NI61 221 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 ZNF263O14978 683 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 GNPATO15228 680 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 GOLGA8HP0CJ92 632 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 TRIM21P19474 475 aaKnown RBP9.33□□□□□ -0.92
CSTF3-208ENST00000528865 KLK7P49862 253 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 GPSM2P81274 684 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 LRRC63Q05C16 580 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 GABPAQ06546 454 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 MAPK8IP2Q13387 824 aaPredicted RBP9.33□□□□□ -0.92
CSTF3-208ENST00000528865 MCM6Q14566 821 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 SEPT2Q15019 361 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 MAN2A1Q16706 1144 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 ASTE1Q2TB18 679 aaPredicted RBP9.33□□□□□ -0.92
CSTF3-208ENST00000528865 CRY2Q49AN0 593 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 ASPRV1Q53RT3 343 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 HYIQ5T013 277 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 PPP4R3AQ6IN85 833 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 PPP1R18Q6NYC8 613 aa9.33□□□□□ -0.92
CSTF3-208ENST00000528865 USP17L2Q6R6M4 530 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms