RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 KCNJ12Q14500 433 aa19.77■□□□□ 0.76
LTBP3-210ENST00000528516 TBC1D10BQ4KMP7 808 aaPredicted RBP19.77■□□□□ 0.76
LTBP3-210ENST00000528516 FMNL3Q8IVF7 1028 aa19.77■□□□□ 0.76
LTBP3-210ENST00000528516 CNBD1Q8NA66 436 aa19.77■□□□□ 0.76
LTBP3-210ENST00000528516 USP17L3A6NCW0 530 aa19.77■□□□□ 0.75
LTBP3-210ENST00000528516 USP17L4A6NCW7 530 aa19.77■□□□□ 0.75
LTBP3-210ENST00000528516 SMCO2A6NFE2 343 aa19.77■□□□□ 0.75
LTBP3-210ENST00000528516 HLA-DOAP06340 250 aa19.77■□□□□ 0.75
LTBP3-210ENST00000528516 GTF2IP78347 998 aa19.77■□□□□ 0.75
LTBP3-210ENST00000528516 USP17L1Q7RTZ2 530 aa19.77■□□□□ 0.75
LTBP3-210ENST00000528516 VPS36Q86VN1 386 aa19.77■□□□□ 0.75
LTBP3-210ENST00000528516 SLC44A5Q8NCS7 719 aa19.77■□□□□ 0.75
LTBP3-210ENST00000528516 TBC1D31Q96DN5 1066 aa19.77■□□□□ 0.75
LTBP3-210ENST00000528516 BUB1O43683 1085 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 KRT14P02533 472 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 GNA11P29992 359 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 ERFEQ4G0M1 354 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 SV2BQ7L1I2 683 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 TRAPPC11Q7Z392 1133 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 GDAQ9Y2T3 454 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 NFAT5O94916 1531 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 KLRF2D3W0D1 207 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 PRDX5P30044 214 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 GCKP35557 465 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 COPB1P53618 953 aaKnown RBP19.76■□□□□ 0.75
LTBP3-210ENST00000528516 EZH2Q15910 746 aaKnown RBP19.76■□□□□ 0.75
LTBP3-210ENST00000528516 CABP7Q86V35 215 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 KLHL7Q8IXQ5 586 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 TRIM6Q9C030 488 aaPredicted RBP19.76■□□□□ 0.75
LTBP3-210ENST00000528516 NAIF1Q69YI7 327 aaPredicted RBP19.76■□□□□ 0.75
LTBP3-210ENST00000528516 C8orf74Q6P047 294 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 ZNF804AQ7Z570 1209 aa19.76■□□□□ 0.75
LTBP3-210ENST00000528516 PARP10Q53GL7 1025 aa19.75■□□□□ 0.75
LTBP3-210ENST00000528516 AGPSO00116 658 aa19.75■□□□□ 0.75
LTBP3-210ENST00000528516 LRRC1Q9BTT6 524 aa19.75■□□□□ 0.75
LTBP3-210ENST00000528516 RBM28Q9NW13 759 aaKnown RBP19.75■□□□□ 0.75
LTBP3-210ENST00000528516 BAIAP2L1Q9UHR4 511 aa19.75■□□□□ 0.75
LTBP3-210ENST00000528516 LTN1O94822 1766 aa19.75■□□□□ 0.75
LTBP3-210ENST00000528516 SCG2P13521 617 aa19.75■□□□□ 0.75
LTBP3-210ENST00000528516 MAGEA1P43355 309 aa19.75■□□□□ 0.75
LTBP3-210ENST00000528516 ADAT2Q7Z6V5 191 aaKnown RBP19.75■□□□□ 0.75
LTBP3-210ENST00000528516 SPATS2Q86XZ4 545 aaKnown RBP19.75■□□□□ 0.75
LTBP3-210ENST00000528516 CUL5Q93034 780 aa19.75■□□□□ 0.75
LTBP3-210ENST00000528516 TARSL2A2RTX5 802 aaKnown RBP19.74■□□□□ 0.75
LTBP3-210ENST00000528516 PP2D1A8MPX8 630 aa19.74■□□□□ 0.75
LTBP3-210ENST00000528516 DDX39AO00148 427 aaKnown RBP19.74■□□□□ 0.75
LTBP3-210ENST00000528516 BLIDQ8IZY5 108 aa19.74■□□□□ 0.75
LTBP3-210ENST00000528516 MIEF2Q96C03 454 aa19.74■□□□□ 0.75
LTBP3-210ENST00000528516 B4DLN1 442 aa19.74■□□□□ 0.75
LTBP3-210ENST00000528516 APBA1Q02410 837 aa19.74■□□□□ 0.75
LTBP3-210ENST00000528516 TRIM14Q14142 442 aa19.74■□□□□ 0.75
LTBP3-210ENST00000528516 USP17L2Q6R6M4 530 aa19.74■□□□□ 0.75
LTBP3-210ENST00000528516 KCNG1Q9UIX4 513 aa19.74■□□□□ 0.75
LTBP3-210ENST00000528516 A6NNZ2 444 aa19.74■□□□□ 0.75
LTBP3-210ENST00000528516 SHOX2O60902 331 aaPredicted RBP19.74■□□□□ 0.75
LTBP3-210ENST00000528516 MMP1P03956 469 aa19.74■□□□□ 0.75
LTBP3-210ENST00000528516 CD44P16070 742 aaKnown RBP19.74■□□□□ 0.75
LTBP3-210ENST00000528516 TUBB8Q3ZCM7 444 aa19.74■□□□□ 0.75
LTBP3-210ENST00000528516 MFSD14BQ5SR56 506 aa19.74■□□□□ 0.75
LTBP3-210ENST00000528516 SKAP2O75563 359 aaPredicted RBP19.73■□□□□ 0.75
LTBP3-210ENST00000528516 AMPD2Q01433 879 aa19.73■□□□□ 0.75
LTBP3-210ENST00000528516 DOK7Q18PE1 504 aa19.73■□□□□ 0.75
LTBP3-210ENST00000528516 HDAC7Q8WUI4 952 aa19.73■□□□□ 0.75
LTBP3-210ENST00000528516 MAP3K14Q99558 947 aa19.73■□□□□ 0.75
LTBP3-210ENST00000528516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.73■□□□□ 0.75
LTBP3-210ENST00000528516 SMARCAL1Q9NZC9 954 aa19.73■□□□□ 0.75
LTBP3-210ENST00000528516 MSL1Q68DK7 614 aa19.73■□□□□ 0.75
LTBP3-210ENST00000528516 CCDC25Q86WR0 208 aa19.73■□□□□ 0.75
LTBP3-210ENST00000528516 DMGDHQ9UI17 866 aaKnown RBP19.73■□□□□ 0.75
LTBP3-210ENST00000528516 TRIM49BA6NDI0 452 aa19.73■□□□□ 0.75
LTBP3-210ENST00000528516 CIAO1O76071 339 aa19.73■□□□□ 0.75
LTBP3-210ENST00000528516 NAA35Q5VZE5 725 aa19.73■□□□□ 0.75
LTBP3-210ENST00000528516 EYA3Q99504 573 aa19.73■□□□□ 0.75
LTBP3-210ENST00000528516 KRT13P13646 458 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 LSP1P33241 339 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 SLC16A2P36021 539 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 GSTO1P78417 241 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 NONOQ15233 471 aaKnown RBP eCLIP19.72■□□□□ 0.75
LTBP3-210ENST00000528516 CCDC13Q8IYE1 715 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 RSRC1Q96IZ7 334 aaKnown RBP19.72■□□□□ 0.75
LTBP3-210ENST00000528516 SLC40A1Q9NP59 571 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 RIPOR2Q9Y4F9 1068 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 PDHBP11177 359 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 IFNAR1P17181 557 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 PTPREP23469 700 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 EPHB4P54760 987 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 TRAPPC3LQ5T215 181 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 MB21D2Q8IYB1 491 aaPredicted RBP19.72■□□□□ 0.75
LTBP3-210ENST00000528516 PYM1Q9BRP8 204 aaKnown RBP19.72■□□□□ 0.75
LTBP3-210ENST00000528516 JCADQ9P266 1359 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 MEGF6O75095 1541 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 GCFC2P16383 781 aaKnown RBP19.72■□□□□ 0.75
LTBP3-210ENST00000528516 NR1D1P20393 614 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 ANTXR2P58335 489 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 CYP4A11Q02928 519 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 ZNF473Q8WTR7 871 aaKnown RBP19.72■□□□□ 0.75
LTBP3-210ENST00000528516 MED15Q96RN5 788 aa19.72■□□□□ 0.75
LTBP3-210ENST00000528516 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.72■□□□□ 0.75
LTBP3-210ENST00000528516 TTC26A0AVF1 554 aa19.71■□□□□ 0.75
LTBP3-210ENST00000528516 RNF225M0QZC1 329 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms