RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CHURC1Q8WUH1 139 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 MTRQ99707 1265 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 FER1L6Q2WGJ9 1857 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 LTBP3Q9NS15 1303 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 RAD21O60216 631 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 TXKP42681 527 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 LRMPQ12912 555 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 PAK1Q13153 545 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 TNFAIP1Q13829 316 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 COBLL1Q53SF7 1204 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 KRT79Q5XKE5 535 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 NOC3LQ8WTT2 800 aaKnown RBP16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 BLZF1Q9H2G9 400 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 DDX25Q9UHL0 483 aaKnown RBP16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 CD2APQ9Y5K6 639 aa16.62■□□□□ 0.25
ECHDC1-220ENST00000528402 CNTNAP1P78357 1384 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 A0A1B0GTH6 734 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 LRRC10BA6NIK2 292 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 TMEM232C9JQI7 657 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 TBX3O15119 743 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 MARCH6O60337 910 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 PLCG1P19174 1290 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 CDC25AP30304 524 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 NR1I3Q14994 352 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 CDKAL1Q5VV42 579 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 CNNM4Q6P4Q7 775 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 SV2BQ7L1I2 683 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 FAM160B2Q86V87 743 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 SLFN12Q8IYM2 578 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 DHTKD1Q96HY7 919 aaPredicted RBP16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 CDK5RAP3Q96JB5 506 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 MBOAT7Q96N66 472 aa16.61■□□□□ 0.25
ECHDC1-220ENST00000528402 MYH7BA7E2Y1 1941 aa16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 PVALEFA0A1B0GWK0 134 aa16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 CLRN2A0PK11 232 aa16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 KIF2AO00139 706 aaPredicted RBP16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 STAT2P52630 851 aa16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 ZNF280AP59817 542 aaPredicted RBP16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 CCZ1BP86790 482 aa16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 CCZ1P86791 482 aaPredicted RBP16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 IKQ13123 557 aaPredicted RBP16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 SPECC1LQ69YQ0 1117 aa16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 NT5C3AQ9H0P0 336 aa16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 VEZTQ9HBM0 779 aa16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 ZBTB21Q9ULJ3 1066 aa16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 R3HCC1Q9Y3T6 440 aaKnown RBP16.6■□□□□ 0.25
ECHDC1-220ENST00000528402 BRCA1P38398 1863 aaKnown RBP16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 KDM3AQ9Y4C1 1321 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 PSDA5PKW4 1024 aaPredicted RBP16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 PIK3CDO00329 1044 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 PSMA7O14818 248 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 EDIL3O43854 480 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 KLRC4O43908 158 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 ASNSP08243 561 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 CAP2P40123 477 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 UBE2SQ16763 222 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 KMT5BQ4FZB7 885 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 KLHL10Q6JEL2 608 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 ADSSL1Q8N142 457 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 KCTD17Q8N5Z5 321 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 GIMAP8Q8ND71 665 aaPredicted RBP16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 STAMQ92783 540 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 DPF2Q92785 391 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 MED15Q96RN5 788 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 MMTAG2Q9BU76 263 aaKnown RBP16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 ANO3Q9BYT9 981 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 TRIM9Q9C026 710 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 MYOZ2Q9NPC6 264 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 SAMSN1Q9NSI8 373 aaKnown RBP16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 LIMA1Q9UHB6 759 aaKnown RBP16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 PCDHA12Q9UN75 941 aa16.59■□□□□ 0.25
ECHDC1-220ENST00000528402 BICDL2A1A5D9 508 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 PP2D1A8MPX8 630 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 WNT10BO00744 389 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 MEIS2O14770 477 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 TDP2O95551 362 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 SLURP2P0DP57 97 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 CASP1P29466 404 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 TBX2Q13207 712 aaPredicted RBP16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 HYIQ5T013 277 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 FCHSD1Q86WN1 690 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 TRMT44Q8IYL2 757 aaKnown RBP16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 NELFBQ8WX92 580 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 VCPKMTQ9H867 229 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 PRR12Q9ULL5 1215 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 COL4A5P29400 1685 aa16.58■□□□□ 0.24
ECHDC1-220ENST00000528402 A0A1W2PRG0 241 aa16.57■□□□□ 0.24
ECHDC1-220ENST00000528402 SPDYE3A6NKU9 549 aa16.57■□□□□ 0.24
ECHDC1-220ENST00000528402 SLC37A4O43826 429 aa16.57■□□□□ 0.24
ECHDC1-220ENST00000528402 CYP3A4P08684 503 aa16.57■□□□□ 0.24
ECHDC1-220ENST00000528402 CIITAP33076 1130 aa16.57■□□□□ 0.24
ECHDC1-220ENST00000528402 PSMD2Q13200 908 aa16.57■□□□□ 0.24
ECHDC1-220ENST00000528402 RRP1BQ14684 758 aaKnown RBP16.57■□□□□ 0.24
ECHDC1-220ENST00000528402 Q4G0T1 1027 aa16.57■□□□□ 0.24
ECHDC1-220ENST00000528402 ARMCX5Q6P1M9 558 aa16.57■□□□□ 0.24
ECHDC1-220ENST00000528402 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
ECHDC1-220ENST00000528402 EHMT1Q9H9B1 1298 aa16.57■□□□□ 0.24
ECHDC1-220ENST00000528402 EXOC1Q9NV70 894 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms