RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.25■□□□□ 0.51
CLNS1A-210ENST00000528364 ZNF213O14771 459 aa18.25■□□□□ 0.51
CLNS1A-210ENST00000528364 TLR3O15455 904 aaKnown RBP18.25■□□□□ 0.51
CLNS1A-210ENST00000528364 SNHG28P0DPA3 235 aa18.25■□□□□ 0.51
CLNS1A-210ENST00000528364 AAMPQ13685 434 aa18.25■□□□□ 0.51
CLNS1A-210ENST00000528364 ZNF365Q70YC5 407 aa18.25■□□□□ 0.51
CLNS1A-210ENST00000528364 KDM4AO75164 1064 aa18.24■□□□□ 0.51
CLNS1A-210ENST00000528364 CABYRO75952 493 aa18.24■□□□□ 0.51
CLNS1A-210ENST00000528364 PPIGQ13427 754 aaKnown RBP eCLIP18.24■□□□□ 0.51
CLNS1A-210ENST00000528364 DUSP28Q4G0W2 176 aa18.24■□□□□ 0.51
CLNS1A-210ENST00000528364 RNF207Q6ZRF8 634 aa18.24■□□□□ 0.51
CLNS1A-210ENST00000528364 TMEM199Q8N511 208 aa18.24■□□□□ 0.51
CLNS1A-210ENST00000528364 TBC1D5Q92609 795 aa18.24■□□□□ 0.51
CLNS1A-210ENST00000528364 ESR2Q92731 530 aa18.24■□□□□ 0.51
CLNS1A-210ENST00000528364 WDR11Q9BZH6 1224 aa18.24■□□□□ 0.51
CLNS1A-210ENST00000528364 RNF41Q9H4P4 317 aaPredicted RBP18.24■□□□□ 0.51
CLNS1A-210ENST00000528364 ADD3Q9UEY8 706 aaKnown RBP18.24■□□□□ 0.51
CLNS1A-210ENST00000528364 Q9Y3F1 56 aa18.24■□□□□ 0.51
CLNS1A-210ENST00000528364 LRRC37A2A6NM11 1700 aa18.23■□□□□ 0.51
CLNS1A-210ENST00000528364 ZEB2O60315 1214 aa18.23■□□□□ 0.51
CLNS1A-210ENST00000528364 PCP11498 1178 aaKnown RBP18.23■□□□□ 0.51
CLNS1A-210ENST00000528364 PBX2P40425 430 aa18.23■□□□□ 0.51
CLNS1A-210ENST00000528364 MFAP1P55081 439 aaKnown RBP18.23■□□□□ 0.51
CLNS1A-210ENST00000528364 RPS6P62753 249 aaKnown RBP18.23■□□□□ 0.51
CLNS1A-210ENST00000528364 GRIN2CQ14957 1233 aa18.23■□□□□ 0.51
CLNS1A-210ENST00000528364 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.23■□□□□ 0.51
CLNS1A-210ENST00000528364 MAFAQ8NHW3 353 aaPredicted RBP18.23■□□□□ 0.51
CLNS1A-210ENST00000528364 PPP1R13LQ8WUF5 828 aa18.23■□□□□ 0.51
CLNS1A-210ENST00000528364 DIAPH3Q9NSV4 1193 aa18.23■□□□□ 0.51
CLNS1A-210ENST00000528364 RBM47A0AV96 593 aaKnown RBP18.22■□□□□ 0.51
CLNS1A-210ENST00000528364 B4E1Z4 1266 aa18.22■□□□□ 0.51
CLNS1A-210ENST00000528364 B4GALT4O60513 344 aa18.22■□□□□ 0.51
CLNS1A-210ENST00000528364 DNAJB2P25686 324 aa18.22■□□□□ 0.51
CLNS1A-210ENST00000528364 CCL23P55773 120 aa18.22■□□□□ 0.51
CLNS1A-210ENST00000528364 USH1GQ495M9 461 aa18.22■□□□□ 0.51
CLNS1A-210ENST00000528364 RASIP1Q5U651 963 aa18.22■□□□□ 0.51
CLNS1A-210ENST00000528364 DGKHQ86XP1 1220 aa18.22■□□□□ 0.51
CLNS1A-210ENST00000528364 COPS5Q92905 334 aa18.22■□□□□ 0.51
CLNS1A-210ENST00000528364 IL25Q9H293 177 aa18.22■□□□□ 0.51
CLNS1A-210ENST00000528364 MYL3P08590 195 aa18.21■□□□□ 0.51
CLNS1A-210ENST00000528364 PNMA1Q8ND90 353 aa18.21■□□□□ 0.51
CLNS1A-210ENST00000528364 NOC4LQ9BVI4 516 aaKnown RBP18.21■□□□□ 0.51
CLNS1A-210ENST00000528364 COL25A1Q9BXS0 654 aaPredicted RBP18.21■□□□□ 0.51
CLNS1A-210ENST00000528364 HIPK3Q9H422 1215 aa18.21■□□□□ 0.51
CLNS1A-210ENST00000528364 IL23AQ9NPF7 189 aa18.21■□□□□ 0.51
CLNS1A-210ENST00000528364 CXXC1Q9P0U4 656 aaPredicted RBP18.21■□□□□ 0.51
CLNS1A-210ENST00000528364 ZSWIM5Q9P217 1185 aa18.21■□□□□ 0.51
CLNS1A-210ENST00000528364 FOSL2P15408 326 aa18.2■□□□□ 0.5
CLNS1A-210ENST00000528364 PDE4DQ08499 809 aa18.2■□□□□ 0.5
CLNS1A-210ENST00000528364 ANKS1AQ92625 1134 aa18.2■□□□□ 0.5
CLNS1A-210ENST00000528364 TIFAQ96CG3 184 aa18.2■□□□□ 0.5
CLNS1A-210ENST00000528364 ZSCAN10Q96SZ4 725 aaPredicted RBP18.2■□□□□ 0.5
CLNS1A-210ENST00000528364 ZNF576Q9H609 170 aa18.2■□□□□ 0.5
CLNS1A-210ENST00000528364 VAT1LQ9HCJ6 419 aa18.2■□□□□ 0.5
CLNS1A-210ENST00000528364 TRMT13Q9NUP7 481 aaKnown RBP18.2■□□□□ 0.5
CLNS1A-210ENST00000528364 WDR19Q8NEZ3 1342 aa18.2■□□□□ 0.5
CLNS1A-210ENST00000528364 FGBP02675 491 aa18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 CYP2C9P11712 490 aa18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 EDNRBP24530 442 aa18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 PDE4AP27815 886 aa18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 PURAQ00577 322 aaKnown RBP18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 CDC37Q16543 378 aaPredicted RBP18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 GPATCH4Q5T3I0 446 aaKnown RBP18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 ADGRF4Q8IZF3 695 aa18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 ENAHQ8N8S7 591 aaPredicted RBP18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 OR6J1Q8NGC5 347 aa18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 VWCEQ96DN2 955 aa18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 TAAR1Q96RJ0 339 aa18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 DSCC1Q9BVC3 393 aa18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 PBX4Q9BYU1 374 aa18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 WNT8AQ9H1J5 351 aa18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 ALDH8A1Q9H2A2 487 aaPredicted RBP18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 KAT14Q9H8E8 782 aa18.19■□□□□ 0.5
CLNS1A-210ENST00000528364 LOC102724159A0A0B4J2E5 919 aa18.18■□□□□ 0.5
CLNS1A-210ENST00000528364 ARIH2O95376 493 aa18.18■□□□□ 0.5
CLNS1A-210ENST00000528364 PWP2Q15269 919 aaKnown RBP18.18■□□□□ 0.5
CLNS1A-210ENST00000528364 OTOP2Q7RTS6 562 aa18.18■□□□□ 0.5
CLNS1A-210ENST00000528364 IQCA1Q86XH1 822 aa18.18■□□□□ 0.5
CLNS1A-210ENST00000528364 HERVK_113Q902F9 699 aa18.18■□□□□ 0.5
CLNS1A-210ENST00000528364 SCLYQ96I15 445 aa18.18■□□□□ 0.5
CLNS1A-210ENST00000528364 COL20A1Q9P218 1284 aa18.18■□□□□ 0.5
CLNS1A-210ENST00000528364 PNMA2Q9UL42 364 aa18.18■□□□□ 0.5
CLNS1A-210ENST00000528364 TMEM265A0A087WTH1 108 aa18.17■□□□□ 0.5
CLNS1A-210ENST00000528364 HIP1O00291 1037 aa18.17■□□□□ 0.5
CLNS1A-210ENST00000528364 TXNP10599 105 aaKnown RBP18.17■□□□□ 0.5
CLNS1A-210ENST00000528364 IMMTQ16891 758 aaKnown RBP18.17■□□□□ 0.5
CLNS1A-210ENST00000528364 QRICH1Q2TAL8 776 aa18.17■□□□□ 0.5
CLNS1A-210ENST00000528364 NBPF20Q3BBV1 942 aa18.17■□□□□ 0.5
CLNS1A-210ENST00000528364 CCDC178Q5BJE1 867 aa18.17■□□□□ 0.5
CLNS1A-210ENST00000528364 PSRC1Q6PGN9 363 aaPredicted RBP18.17■□□□□ 0.5
CLNS1A-210ENST00000528364 RGS22Q8NE09 1264 aa18.17■□□□□ 0.5
CLNS1A-210ENST00000528364 DNERQ8NFT8 737 aa18.17■□□□□ 0.5
CLNS1A-210ENST00000528364 POLR3EQ9NVU0 708 aa18.17■□□□□ 0.5
CLNS1A-210ENST00000528364 SUPT16HQ9Y5B9 1047 aaKnown RBP18.17■□□□□ 0.5
CLNS1A-210ENST00000528364 PPP2R5BQ15173 497 aa18.16■□□□□ 0.5
CLNS1A-210ENST00000528364 STAG2Q8N3U4 1231 aa18.16■□□□□ 0.5
CLNS1A-210ENST00000528364 SYTL5Q8TDW5 730 aaPredicted RBP18.16■□□□□ 0.5
CLNS1A-210ENST00000528364 SCFD2Q8WU76 684 aa18.16■□□□□ 0.5
CLNS1A-210ENST00000528364 MTG1Q9BT17 334 aaPredicted RBP18.16■□□□□ 0.5
CLNS1A-210ENST00000528364 SEZ6LQ9BYH1 1024 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms