RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	RTKN2	Q8IZC4	609 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	RETREG2	Q8NC44	543 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	TRIM34	Q9BYJ4	488 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	BLZF1	Q9H2G9	400 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	JMJD4	Q9H9V9	463 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	EXOC1	Q9NV70	894 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	ABCB11	O95342	1321 aa		11.46	□□□□□ -0.57
PGAP2-231	ENST00000528216	ADAMTS3	O15072	1205 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	KLRC4	O43908	158 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	MFAP3L	O75121	409 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	PLCG1	P19174	1290 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	PRCP	P42785	496 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	CLK2	P49760	499 aa	Known RBP	11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	USP11	P51784	963 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	TUBB4B	P68371	445 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	RBM10	P98175	930 aa	Known RBP	11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	PSMD2	Q13200	908 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	AP3B2	Q13367	1082 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	DOK7	Q18PE1	504 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	KMT5B	Q4FZB7	885 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	DACT2	Q5SW24	774 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	TATDN1	Q6P1N9	297 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	SV2B	Q7L1I2	683 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	ADGRF4	Q8IZF3	695 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	KCTD17	Q8N5Z5	321 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	GMCL1P1	Q8NEA9	526 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	TRIM9	Q9C026	710 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	MTMR7	Q9Y216	660 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	KDM3A	Q9Y4C1	1321 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216	SLX4	Q8IY92	1834 aa		11.46	□□□□□ -0.58
PGAP2-231	ENST00000528216		F8W031	263 aa	Predicted RBP	11.45	□□□□□ -0.58
PGAP2-231	ENST00000528216	CCNE1	P24864	410 aa		11.45	□□□□□ -0.58
PGAP2-231	ENST00000528216	DNM2	P50570	870 aa		11.45	□□□□□ -0.58
PGAP2-231	ENST00000528216	STX17	P56962	302 aa		11.45	□□□□□ -0.58
PGAP2-231	ENST00000528216	RASSF7	Q02833	373 aa		11.45	□□□□□ -0.58
PGAP2-231	ENST00000528216	LRRC47	Q8N1G4	583 aa	Known RBP	11.45	□□□□□ -0.58
PGAP2-231	ENST00000528216	CDK5RAP3	Q96JB5	506 aa		11.45	□□□□□ -0.58
PGAP2-231	ENST00000528216	NUP58	Q9BVL2	599 aa		11.45	□□□□□ -0.58
PGAP2-231	ENST00000528216	VPS33B	Q9H267	617 aa		11.45	□□□□□ -0.58
PGAP2-231	ENST00000528216	VAT1L	Q9HCJ6	419 aa		11.45	□□□□□ -0.58
PGAP2-231	ENST00000528216	LRWD1	Q9UFC0	647 aa		11.45	□□□□□ -0.58
PGAP2-231	ENST00000528216	PSME4	Q14997	1843 aa		11.45	□□□□□ -0.58
PGAP2-231	ENST00000528216	LGALS16	A8MUM7	142 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	ECE2	O60344	883 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	NCBP1	Q09161	790 aa	Known RBP	11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	CCDC96	Q2M329	555 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	CERKL	Q49MI3	558 aa	Predicted RBP	11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	JAKMIP3	Q5VZ66	844 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	KRT79	Q5XKE5	535 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	ZNF710	Q8N1W2	664 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	GMCL1	Q96IK5	515 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	FEZ1	Q99689	392 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	CCDC94	Q9BW85	323 aa	Predicted RBP	11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	UBA5	Q9GZZ9	404 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	NT5C3A	Q9H0P0	336 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	TAOK3	Q9H2K8	898 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	BIN2	Q9UBW5	565 aa	Predicted RBP	11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	DNAI1	Q9UI46	699 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	ARFGEF1	Q9Y6D6	1849 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	NFKBIE	O00221	500 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	FOS	P01100	380 aa	Predicted RBP	11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	PRKCSH	P14314	528 aa	Predicted RBP	11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	CYP3A7	P24462	503 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	CASP1	P29466	404 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	SCNN1D	P51172	638 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	TSR1	Q2NL82	804 aa	Known RBP	11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	HYI	Q5T013	277 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	TRIM65	Q6PJ69	517 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	SYT10	Q6XYQ8	523 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	UNC13D	Q70J99	1090 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	STAM	Q92783	540 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	P2RX5	Q93086	422 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	TRIM47	Q96LD4	638 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	PSTPIP2	Q9H939	334 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	GPCPD1	Q9NPB8	672 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	MYO1A	Q9UBC5	1043 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	SIPA1L1	O43166	1804 aa		11.44	□□□□□ -0.58
PGAP2-231	ENST00000528216	MPHOSPH10	O00566	681 aa	Known RBP	11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	TBX3	O15119	743 aa		11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	TEX33	O43247	280 aa		11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	ASIC1	P78348	528 aa		11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	PDE4D	Q08499	809 aa		11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	RBL2	Q08999	1139 aa		11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	TMEM119	Q4V9L6	283 aa		11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	TTI2	Q6NXR4	508 aa		11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	CYP26C1	Q6V0L0	522 aa		11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	RASGRP2	Q7LDG7	609 aa		11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	LARP4B	Q92615	738 aa	Known RBP	11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	MBOAT7	Q96N66	472 aa		11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	HERC5	Q9UII4	1024 aa	Known RBP	11.43	□□□□□ -0.58
PGAP2-231	ENST00000528216	PP2D1	A8MPX8	630 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	KIF20A	O95235	890 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	CDC25A	P30304	524 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	CASQ1	P31415	396 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	TEC	P42680	631 aa		11.42	□□□□□ -0.58
PGAP2-231	ENST00000528216	SLC1A4	P43007	532 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms