RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 E7EWF7 191 aa24.52■■□□□ 1.52
PKP3-205ENST00000527442 RABEP1Q15276 862 aa24.52■■□□□ 1.52
PKP3-205ENST00000527442 RAB30Q15771 203 aa24.52■■□□□ 1.52
PKP3-205ENST00000527442 CCDC85BQ15834 202 aaPredicted RBP24.52■■□□□ 1.52
PKP3-205ENST00000527442 SLC43A3Q8NBI5 491 aa24.52■■□□□ 1.52
PKP3-205ENST00000527442 GMCL1P1Q8NEA9 526 aa24.52■■□□□ 1.52
PKP3-205ENST00000527442 NKX2-4Q9H2Z4 354 aa24.52■■□□□ 1.52
PKP3-205ENST00000527442 MSRAQ9UJ68 235 aa24.52■■□□□ 1.52
PKP3-205ENST00000527442 FGRP09769 529 aa24.51■■□□□ 1.51
PKP3-205ENST00000527442 PTGS1P23219 599 aa24.51■■□□□ 1.51
PKP3-205ENST00000527442 TNFAIP2Q03169 654 aa24.51■■□□□ 1.51
PKP3-205ENST00000527442 ADCK5Q3MIX3 580 aa24.51■■□□□ 1.51
PKP3-205ENST00000527442 IL27Q8NEV9 243 aa24.51■■□□□ 1.51
PKP3-205ENST00000527442 ASB2Q96Q27 587 aa24.51■■□□□ 1.51
PKP3-205ENST00000527442 HIPK3Q9H422 1215 aa24.51■■□□□ 1.51
PKP3-205ENST00000527442 RNF41Q9H4P4 317 aaPredicted RBP24.51■■□□□ 1.51
PKP3-205ENST00000527442 ACAD9Q9H845 621 aa24.51■■□□□ 1.51
PKP3-205ENST00000527442 A1CFQ9NQ94 594 aaKnown RBP24.51■■□□□ 1.51
PKP3-205ENST00000527442 SYNPO2Q9UMS6 1093 aa24.51■■□□□ 1.51
PKP3-205ENST00000527442 YBX2Q9Y2T7 364 aaKnown RBP24.51■■□□□ 1.51
PKP3-205ENST00000527442 PLIN4Q96Q06 1357 aa24.51■■□□□ 1.51
PKP3-205ENST00000527442 SOWAHBA6NEL2 793 aa24.5■■□□□ 1.51
PKP3-205ENST00000527442 TTLL1O95922 423 aa24.5■■□□□ 1.51
PKP3-205ENST00000527442 SLC3A2P08195 630 aaKnown RBP24.5■■□□□ 1.51
PKP3-205ENST00000527442 BMP3P12645 472 aa24.5■■□□□ 1.51
PKP3-205ENST00000527442 IGFBP4P22692 258 aa24.5■■□□□ 1.51
PKP3-205ENST00000527442 PSMA5P28066 241 aa24.5■■□□□ 1.51
PKP3-205ENST00000527442 CTDSPL2Q05D32 466 aa24.5■■□□□ 1.51
PKP3-205ENST00000527442 SLFN13Q68D06 897 aa24.5■■□□□ 1.51
PKP3-205ENST00000527442 NOL8Q76FK4 1167 aaKnown RBP24.5■■□□□ 1.51
PKP3-205ENST00000527442 TLK2Q86UE8 772 aa24.5■■□□□ 1.51
PKP3-205ENST00000527442 ZNF444Q8N0Y2 327 aaPredicted RBP24.5■■□□□ 1.51
PKP3-205ENST00000527442 ADAMTS19Q8TE59 1207 aa24.5■■□□□ 1.51
PKP3-205ENST00000527442 JAKMIP1Q96N16 626 aaKnown RBP24.5■■□□□ 1.51
PKP3-205ENST00000527442 GNEQ9Y223 722 aaKnown RBP24.5■■□□□ 1.51
PKP3-205ENST00000527442 DDX49Q9Y6V7 483 aaKnown RBP24.5■■□□□ 1.51
PKP3-205ENST00000527442 REV3LO60673 3130 aa24.49■■□□□ 1.51
PKP3-205ENST00000527442 FGBP02675 491 aa24.49■■□□□ 1.51
PKP3-205ENST00000527442 NT5C2P49902 561 aa24.49■■□□□ 1.51
PKP3-205ENST00000527442 AGBL1Q96MI9 1066 aa24.49■■□□□ 1.51
PKP3-205ENST00000527442 NEK1Q96PY6 1258 aa24.49■■□□□ 1.51
PKP3-205ENST00000527442 RNF146Q9NTX7 359 aa24.49■■□□□ 1.51
PKP3-205ENST00000527442 RAPGEFL1Q9UHV5 662 aa24.49■■□□□ 1.51
PKP3-205ENST00000527442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.49■■□□□ 1.512e-6■■■■□ 20.8
PKP3-205ENST00000527442 ZNF536O15090 1300 aa24.49■■□□□ 1.51
PKP3-205ENST00000527442 GRIN2DO15399 1336 aa24.49■■□□□ 1.51
PKP3-205ENST00000527442 NEDD4P46934 1319 aa24.49■■□□□ 1.51
PKP3-205ENST00000527442 BDP1A6H8Y1 2624 aa24.48■■□□□ 1.51
PKP3-205ENST00000527442 TMEM232C9JQI7 657 aa24.48■■□□□ 1.51
PKP3-205ENST00000527442 CCL23P55773 120 aa24.48■■□□□ 1.51
PKP3-205ENST00000527442 ITGA7Q13683 1181 aa24.48■■□□□ 1.51
PKP3-205ENST00000527442 FSCN1Q16658 493 aaKnown RBP24.48■■□□□ 1.51
PKP3-205ENST00000527442 OTOP2Q7RTS6 562 aa24.48■■□□□ 1.51
PKP3-205ENST00000527442 MTIF3Q9H2K0 278 aaKnown RBP24.48■■□□□ 1.51
PKP3-205ENST00000527442 CNNM2Q9H8M5 875 aa24.48■■□□□ 1.51
PKP3-205ENST00000527442 SLC28A3Q9HAS3 691 aa24.48■■□□□ 1.51
PKP3-205ENST00000527442 ZNF287Q9HBT7 754 aa24.48■■□□□ 1.51
PKP3-205ENST00000527442 ZSWIM6Q9HCJ5 1215 aa24.48■■□□□ 1.51
PKP3-205ENST00000527442 ISY1Q9ULR0 285 aaKnown RBP24.48■■□□□ 1.51
PKP3-205ENST00000527442 ORC4O43929 436 aa24.47■■□□□ 1.51
PKP3-205ENST00000527442 HMGB1P09429 215 aaKnown RBP24.47■■□□□ 1.51
PKP3-205ENST00000527442 MRPS5P82675 430 aaKnown RBP24.47■■□□□ 1.51
PKP3-205ENST00000527442 MFSD6Q6ZSS7 791 aa24.47■■□□□ 1.51
PKP3-205ENST00000527442 NEDD1Q8NHV4 660 aa24.47■■□□□ 1.51
PKP3-205ENST00000527442 NCOA7Q8NI08 942 aa24.47■■□□□ 1.51
PKP3-205ENST00000527442 CHMP4CQ96CF2 233 aa24.47■■□□□ 1.51
PKP3-205ENST00000527442 NOC4LQ9BVI4 516 aaKnown RBP24.47■■□□□ 1.51
PKP3-205ENST00000527442 TRPV6Q9H1D0 765 aa24.47■■□□□ 1.51
PKP3-205ENST00000527442 WNT8AQ9H1J5 351 aa24.47■■□□□ 1.51
PKP3-205ENST00000527442 RBM19Q9Y4C8 960 aaKnown RBP24.47■■□□□ 1.51
PKP3-205ENST00000527442 NCOR1O75376 2440 aa24.47■■□□□ 1.51
PKP3-205ENST00000527442 TCF20Q9UGU0 1960 aaKnown RBP24.47■■□□□ 1.51
PKP3-205ENST00000527442 SCN5AQ14524 2016 aa24.46■■□□□ 1.51
PKP3-205ENST00000527442 CABYRO75952 493 aa24.46■■□□□ 1.51
PKP3-205ENST00000527442 FDX1P10109 184 aa24.46■■□□□ 1.51
PKP3-205ENST00000527442 SMPD1P17405 629 aa24.46■■□□□ 1.51
PKP3-205ENST00000527442 CASTP20810 708 aaKnown RBP24.46■■□□□ 1.51
PKP3-205ENST00000527442 STAT2P52630 851 aa24.46■■□□□ 1.51
PKP3-205ENST00000527442 PDE4BQ07343 736 aa24.46■■□□□ 1.51
PKP3-205ENST00000527442 TRDNQ13061 729 aa24.46■■□□□ 1.51
PKP3-205ENST00000527442 BLOC1S2Q6QNY1 142 aa24.46■■□□□ 1.51
PKP3-205ENST00000527442 RALYLQ86SE5 291 aaKnown RBP24.46■■□□□ 1.51
PKP3-205ENST00000527442 MB21D2Q8IYB1 491 aaPredicted RBP24.46■■□□□ 1.51
PKP3-205ENST00000527442 KRT23Q9C075 422 aa24.46■■□□□ 1.51
PKP3-205ENST00000527442 PDGFCQ9NRA1 345 aa24.46■■□□□ 1.51
PKP3-205ENST00000527442 WDR19Q8NEZ3 1342 aa24.45■■□□□ 1.5
PKP3-205ENST00000527442 ASB14A6NK59 587 aa24.45■■□□□ 1.5
PKP3-205ENST00000527442 B4GALT4O60513 344 aa24.45■■□□□ 1.5
PKP3-205ENST00000527442 TSPY3P0CV98 308 aa24.45■■□□□ 1.5
PKP3-205ENST00000527442 TSPY8P0CW00 308 aa24.45■■□□□ 1.5
PKP3-205ENST00000527442 RABGGTBP53611 331 aa24.45■■□□□ 1.5
PKP3-205ENST00000527442 PSMC6P62333 389 aa24.45■■□□□ 1.5
PKP3-205ENST00000527442 TMEM63BQ5T3F8 832 aa24.45■■□□□ 1.5
PKP3-205ENST00000527442 RUFY3Q7L099 469 aa24.45■■□□□ 1.5
PKP3-205ENST00000527442 UHRF1Q96T88 793 aaPredicted RBP24.45■■□□□ 1.5
PKP3-205ENST00000527442 AP5M1Q9H0R1 490 aa24.45■■□□□ 1.5
PKP3-205ENST00000527442 DYNC1LI2O43237 492 aaPredicted RBP24.44■■□□□ 1.5
PKP3-205ENST00000527442 ALAS1P13196 640 aa24.44■■□□□ 1.5
PKP3-205ENST00000527442 RPS6KB1P23443 525 aa24.44■■□□□ 1.5
PKP3-205ENST00000527442 IKQ13123 557 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms