RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ANTXR2P58335 489 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 SHHQ15465 462 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 ASPRV1Q53RT3 343 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 C9orf50Q5SZB4 431 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 IFIT1BQ5T764 474 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 NOL8Q76FK4 1167 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 CHST3Q7LGC8 479 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 ANKRD33Q7Z3H0 272 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 TLK2Q86UE8 772 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 PCSK9Q8NBP7 692 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 RGS22Q8NE09 1264 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 TOX2Q96NM4 488 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 LSG1Q9H089 658 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 VTA1Q9NP79 307 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 COL20A1Q9P218 1284 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 PRKAG2Q9UGJ0 569 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 MAD2L2Q9UI95 211 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 PNMA2Q9UL42 364 aa12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 RBM8AQ9Y5S9 174 aaKnown RBP12.2□□□□□ -0.46
PRPF40B-204ENST00000527253 GRIN2DO15399 1336 aa12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 ELP1O95163 1332 aa12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 RBM47A0AV96 593 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 PALM3A6NDB9 673 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 OPLAHO14841 1288 aa12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 PPP1R11O60927 126 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 CXCL17Q6UXB2 119 aa12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 KIAA1211Q6ZU35 1233 aa12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 MB21D2Q8IYB1 491 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 SYTL5Q8TDW5 730 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 NUP133Q8WUM0 1156 aa12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 MTMR8Q96EF0 704 aa12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 TAAR1Q96RJ0 339 aa12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 SPC25Q9HBM1 224 aa12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 GPHNQ9NQX3 736 aaPredicted RBP12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 ADD3Q9UEY8 706 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 BAZ2BQ9UIF8 2168 aaKnown RBP12.19□□□□□ -0.46
PRPF40B-204ENST00000527253 ABCB11O95342 1321 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 LOC102724159A0A0B4J2E5 919 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 KLRF2D3W0D1 207 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 ARVCFO00192 962 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 IFIT3O14879 490 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 TRDNQ13061 729 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 GRM4Q14833 912 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 PWP2Q15269 919 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 FSCN1Q16658 493 aaKnown RBP12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 DUSP28Q4G0W2 176 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 Q7L0L9 218 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 FBXO11Q86XK2 927 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 SLC43A3Q8NBI5 491 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 NCOA7Q8NI08 942 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 IGDCC4Q8TDY8 1250 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 GLT1D1Q96MS3 346 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 ESYT1Q9BSJ8 1104 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 WDR11Q9BZH6 1224 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 AP5M1Q9H0R1 490 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 TMEM39AQ9NV64 488 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 TBX21Q9UL17 535 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 Q9Y3F1 56 aa12.18□□□□□ -0.46
PRPF40B-204ENST00000527253 A0A0U1RQG5 324 aaPredicted RBP12.17□□□□□ -0.46
PRPF40B-204ENST00000527253 CYTH3O43739 400 aa12.17□□□□□ -0.46
PRPF40B-204ENST00000527253 DHX16O60231 1041 aaKnown RBP12.17□□□□□ -0.46
PRPF40B-204ENST00000527253 ARIH2O95376 493 aa12.17□□□□□ -0.46
PRPF40B-204ENST00000527253 PSMC6P62333 389 aa12.17□□□□□ -0.46
PRPF40B-204ENST00000527253 TROAPQ12815 778 aa12.17□□□□□ -0.46
PRPF40B-204ENST00000527253 FAM126BQ8IXS8 530 aa12.17□□□□□ -0.46
PRPF40B-204ENST00000527253 DNERQ8NFT8 737 aa12.17□□□□□ -0.46
PRPF40B-204ENST00000527253 COPS5Q92905 334 aa12.17□□□□□ -0.46
PRPF40B-204ENST00000527253 VTI1AQ96AJ9 217 aa12.17□□□□□ -0.46
PRPF40B-204ENST00000527253 DCDC2CA8MYV0 355 aa12.16□□□□□ -0.46
PRPF40B-204ENST00000527253 CD4P01730 458 aa12.16□□□□□ -0.46
PRPF40B-204ENST00000527253 RAG1P15918 1043 aa12.16□□□□□ -0.46
PRPF40B-204ENST00000527253 PDE4DQ08499 809 aa12.16□□□□□ -0.46
PRPF40B-204ENST00000527253 WTAPQ15007 396 aa12.16□□□□□ -0.46
PRPF40B-204ENST00000527253 GPR153Q6NV75 609 aa12.16□□□□□ -0.46
PRPF40B-204ENST00000527253 CENPQQ7L2Z9 268 aaPredicted RBP12.16□□□□□ -0.46
PRPF40B-204ENST00000527253 RIOX1Q9H6W3 641 aa12.16□□□□□ -0.46
PRPF40B-204ENST00000527253 SLC27A2O14975 620 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 ZBTB5O15062 677 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 TIMP1P01033 207 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 GHRHRQ02643 423 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 ITGA7Q13683 1181 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 NECTIN1Q15223 517 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 BMP2KLQ5H9B9 411 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 TMEM67Q5HYA8 995 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 CCDC62Q6P9F0 684 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 C16orf59Q7L2K0 433 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 RALYLQ86SE5 291 aaKnown RBP12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 MCF2L2Q86YR7 1114 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 PIGSQ96S52 555 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 AMNQ9BXJ7 453 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 MAF1Q9H063 256 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 LY9Q9HBG7 655 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 MRPL11Q9Y3B7 192 aaKnown RBP12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 MYH6P13533 1939 aa12.15□□□□□ -0.46
PRPF40B-204ENST00000527253 ZEB2O60315 1214 aa12.14□□□□□ -0.47
PRPF40B-204ENST00000527253 CABYRO75952 493 aa12.14□□□□□ -0.47
PRPF40B-204ENST00000527253 TXNP10599 105 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-204ENST00000527253 HSD17B4P51659 736 aa12.14□□□□□ -0.47
PRPF40B-204ENST00000527253 PURAQ00577 322 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-204ENST00000527253 FPGSQ05932 587 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms