RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-206ENST00000527047 QRICH1Q2TAL8 776 aa13.68□□□□□ -0.22
PSMD13-206ENST00000527047 SHCBP1Q8NEM2 672 aa13.68□□□□□ -0.22
PSMD13-206ENST00000527047 ZNF296Q8WUU4 475 aaPredicted RBP13.68□□□□□ -0.22
PSMD13-206ENST00000527047 WNT2BQ93097 391 aa13.68□□□□□ -0.22
PSMD13-206ENST00000527047 TEX13BQ9BXU2 312 aa13.68□□□□□ -0.22
PSMD13-206ENST00000527047 PORCNQ9H237 461 aa13.68□□□□□ -0.22
PSMD13-206ENST00000527047 SLKQ9H2G2 1235 aaPredicted RBP13.68□□□□□ -0.22
PSMD13-206ENST00000527047 RAVER2Q9HCJ3 691 aaKnown RBP13.68□□□□□ -0.22
PSMD13-206ENST00000527047 RIPK3Q9Y572 518 aa13.68□□□□□ -0.22
PSMD13-206ENST00000527047 PLXNB2O15031 1838 aa13.68□□□□□ -0.22
PSMD13-206ENST00000527047 GOLGA8CPA6NN73 597 aa13.67□□□□□ -0.22
PSMD13-206ENST00000527047 ZBTB5O15062 677 aa13.67□□□□□ -0.22
PSMD13-206ENST00000527047 PPP1R11O60927 126 aaPredicted RBP13.67□□□□□ -0.22
PSMD13-206ENST00000527047 IFNAR1P17181 557 aa13.67□□□□□ -0.22
PSMD13-206ENST00000527047 STAT3P40763 770 aa13.67□□□□□ -0.22
PSMD13-206ENST00000527047 CTCFP49711 727 aaPredicted RBP13.67□□□□□ -0.22
PSMD13-206ENST00000527047 STK3Q13188 491 aa13.67□□□□□ -0.22
PSMD13-206ENST00000527047 THSD4Q6ZMP0 1018 aa13.67□□□□□ -0.22
PSMD13-206ENST00000527047 NOL8Q76FK4 1167 aaKnown RBP13.67□□□□□ -0.22
PSMD13-206ENST00000527047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
PSMD13-206ENST00000527047 CPXCR1Q8N123 301 aa13.67□□□□□ -0.22
PSMD13-206ENST00000527047 GTF3C6Q969F1 213 aa13.67□□□□□ -0.22
PSMD13-206ENST00000527047 AGBL1Q96MI9 1066 aa13.67□□□□□ -0.22
PSMD13-206ENST00000527047 PIGSQ96S52 555 aa13.67□□□□□ -0.22
PSMD13-206ENST00000527047 VAT1LQ9HCJ6 419 aa13.67□□□□□ -0.22
PSMD13-206ENST00000527047 ZNF236Q9UL36 1845 aa13.67□□□□□ -0.22
PSMD13-206ENST00000527047 PNMA6FA0A0J9YX94 578 aa13.66□□□□□ -0.22
PSMD13-206ENST00000527047 FKTNO75072 461 aa13.66□□□□□ -0.22
PSMD13-206ENST00000527047 CTDNEP1O95476 244 aa13.66□□□□□ -0.22
PSMD13-206ENST00000527047 SLC25A27O95847 323 aa13.66□□□□□ -0.22
PSMD13-206ENST00000527047 MCM2P49736 904 aa13.66□□□□□ -0.22
PSMD13-206ENST00000527047 CCNA1P78396 465 aa13.66□□□□□ -0.22
PSMD13-206ENST00000527047 PLS1Q14651 629 aa13.66□□□□□ -0.22
PSMD13-206ENST00000527047 SNRNP48Q6IEG0 339 aaKnown RBP13.66□□□□□ -0.22
PSMD13-206ENST00000527047 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
PSMD13-206ENST00000527047 NECAB1Q8N987 351 aa13.66□□□□□ -0.22
PSMD13-206ENST00000527047 ZSCAN31Q96LW9 406 aaPredicted RBP13.66□□□□□ -0.22
PSMD13-206ENST00000527047 MROH8Q9H579 483 aa13.66□□□□□ -0.22
PSMD13-206ENST00000527047 SH2B1Q9NRF2 756 aaPredicted RBP13.66□□□□□ -0.22
PSMD13-206ENST00000527047 PLA2G2EQ9NZK7 142 aa13.66□□□□□ -0.22
PSMD13-206ENST00000527047 PNMA2Q9UL42 364 aa13.66□□□□□ -0.22
PSMD13-206ENST00000527047 DHX16O60231 1041 aaKnown RBP13.65□□□□□ -0.22
PSMD13-206ENST00000527047 TAL1P17542 331 aaPredicted RBP13.65□□□□□ -0.22
PSMD13-206ENST00000527047 ERCC3P19447 782 aa13.65□□□□□ -0.22
PSMD13-206ENST00000527047 MAPK4P31152 587 aa13.65□□□□□ -0.22
PSMD13-206ENST00000527047 COPB2P35606 906 aa13.65□□□□□ -0.22
PSMD13-206ENST00000527047 TKFCQ3LXA3 575 aa13.65□□□□□ -0.22
PSMD13-206ENST00000527047 CCDC82Q8N4S0 544 aa13.65□□□□□ -0.22
PSMD13-206ENST00000527047 RRP36Q96EU6 259 aaKnown RBP13.65□□□□□ -0.22
PSMD13-206ENST00000527047 TMX3Q96JJ7 454 aa13.65□□□□□ -0.22
PSMD13-206ENST00000527047 TRIM47Q96LD4 638 aa13.65□□□□□ -0.22
PSMD13-206ENST00000527047 RNF26Q9BY78 433 aaPredicted RBP13.65□□□□□ -0.22
PSMD13-206ENST00000527047 ARHGAP39Q9C0H5 1083 aa13.65□□□□□ -0.22
PSMD13-206ENST00000527047 EFCC1Q9HA90 598 aa13.65□□□□□ -0.22
PSMD13-206ENST00000527047 CCPG1Q9ULG6 757 aa13.65□□□□□ -0.22
PSMD13-206ENST00000527047 CTDP1Q9Y5B0 961 aaPredicted RBP13.65□□□□□ -0.22
PSMD13-206ENST00000527047 V9GY48 417 aaPredicted RBP13.65□□□□□ -0.22
PSMD13-206ENST00000527047 RBBP6Q7Z6E9 1792 aaKnown RBP13.65□□□□□ -0.22
PSMD13-206ENST00000527047 LCTP09848 1927 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 PRPF3O43395 683 aaKnown RBP13.64□□□□□ -0.23
PSMD13-206ENST00000527047 LBX1P52954 281 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 PKN1Q16512 942 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 GPR142Q7Z601 462 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 FBXO11Q86XK2 927 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 HOMER1Q86YM7 354 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 CHST13Q8NET6 341 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 CD99L2Q8TCZ2 262 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 CLEC4DQ8WXI8 215 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 PHKBQ93100 1093 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 SNX21Q969T3 373 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 ERO1AQ96HE7 468 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 AMNQ9BXJ7 453 aa13.64□□□□□ -0.23
PSMD13-206ENST00000527047 PLXNA1Q9UIW2 1896 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 hCG_1642624A0A1W2PR95 340 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 CPLX1O14810 134 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 OPLAHO14841 1288 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 FMNL1O95466 1100 aaPredicted RBP13.63□□□□□ -0.23
PSMD13-206ENST00000527047 ALAS1P13196 640 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 PSMC4P43686 418 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 FCGRTP55899 365 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 PFKFB3Q16875 520 aaPredicted RBP13.63□□□□□ -0.23
PSMD13-206ENST00000527047 MUM1L1Q5H9M0 696 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 MORN1Q5T089 497 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 NCAPG2Q86XI2 1143 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 ABRAQ8N0Z2 381 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 NSUN7Q8NE18 718 aaKnown RBP13.63□□□□□ -0.23
PSMD13-206ENST00000527047 PIBF1Q8WXW3 757 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 USP6NLQ92738 828 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 TRERF1Q96PN7 1200 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 RNF146Q9NTX7 359 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 RBM27Q9P2N5 1060 aaKnown RBP13.63□□□□□ -0.23
PSMD13-206ENST00000527047 SEC63Q9UGP8 760 aaKnown RBP13.63□□□□□ -0.23
PSMD13-206ENST00000527047 SEPT9Q9UHD8 586 aaPredicted RBP13.63□□□□□ -0.23
PSMD13-206ENST00000527047 GJD2Q9UKL4 321 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 ABCB11O95342 1321 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 STK36Q9NRP7 1315 aa13.63□□□□□ -0.23
PSMD13-206ENST00000527047 NFIBO00712 420 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 STRNO43815 780 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 CDKL5O76039 1030 aa13.62□□□□□ -0.23
PSMD13-206ENST00000527047 GNRH1P01148 92 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms