RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.87□□□□□ -0.35
CTSB-212ENST00000526645 PARNO95453 639 aaKnown RBP12.87□□□□□ -0.35
CTSB-212ENST00000526645 TTLL1O95922 423 aa12.87□□□□□ -0.35
CTSB-212ENST00000526645 SSTR3P32745 418 aaPredicted RBP12.87□□□□□ -0.35
CTSB-212ENST00000526645 FAM47CQ5HY64 1035 aa12.87□□□□□ -0.35
CTSB-212ENST00000526645 KIAA1211Q6ZU35 1233 aa12.87□□□□□ -0.35
CTSB-212ENST00000526645 GDPD5Q8WTR4 605 aa12.87□□□□□ -0.35
CTSB-212ENST00000526645 CHURC1Q8WUH1 139 aa12.87□□□□□ -0.35
CTSB-212ENST00000526645 UIMC1Q96RL1 719 aa12.87□□□□□ -0.35
CTSB-212ENST00000526645 PDGFCQ9NRA1 345 aa12.87□□□□□ -0.35
CTSB-212ENST00000526645 PTPRSQ13332 1948 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 SIP14410 1827 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 KPNA6O60684 536 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 ATP5JP18859 108 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 EEPD1Q7L9B9 569 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 CAGE1Q8TC20 777 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 AFAP1L1Q8TED9 768 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 CEP95Q96GE4 821 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 GMCL1Q96IK5 515 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 TRERF1Q96PN7 1200 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 TGS1Q96RS0 853 aaKnown RBP12.86□□□□□ -0.35
CTSB-212ENST00000526645 ZBED2Q9BTP6 218 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 MTMR4Q9NYA4 1195 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 CYP39A1Q9NYL5 469 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 ADD3Q9UEY8 706 aaKnown RBP12.86□□□□□ -0.35
CTSB-212ENST00000526645 NOD1Q9Y239 953 aa12.86□□□□□ -0.35
CTSB-212ENST00000526645 TMEM232C9JQI7 657 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 NKRFO15226 690 aaKnown RBP eCLIP12.85□□□□□ -0.352e-7■■□□□ 14
CTSB-212ENST00000526645 DCXO43602 365 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 PLA2G6O60733 806 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 EFCAB14O75071 495 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 MYL3P08590 195 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 ALAS1P13196 640 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 KCNA5P22460 613 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 PTGS1P23219 599 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 ERVK-21P61565 698 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 WDR5P61964 334 aaKnown RBP12.85□□□□□ -0.35
CTSB-212ENST00000526645 IKQ13123 557 aaPredicted RBP12.85□□□□□ -0.35
CTSB-212ENST00000526645 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 SLFN13Q68D06 897 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 PTCRAQ6ISU1 281 aaPredicted RBP12.85□□□□□ -0.35
CTSB-212ENST00000526645 ZNF444Q8N0Y2 327 aaPredicted RBP12.85□□□□□ -0.35
CTSB-212ENST00000526645 LRRC47Q8N1G4 583 aaKnown RBP12.85□□□□□ -0.35
CTSB-212ENST00000526645 HAUS7Q99871 368 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 ISY1Q9ULR0 285 aaKnown RBP12.85□□□□□ -0.35
CTSB-212ENST00000526645 FAM50BQ9Y247 325 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 LCTP09848 1927 aa12.85□□□□□ -0.35
CTSB-212ENST00000526645 RBM47A0AV96 593 aaKnown RBP12.84□□□□□ -0.35
CTSB-212ENST00000526645 LCHNA4D1U4 455 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 NBPF20Q3BBV1 942 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 SLFNL1Q499Z3 407 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 CNKSR3Q6P9H4 555 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 OR6J1Q8NGC5 347 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.84□□□□□ -0.35
CTSB-212ENST00000526645 STAG1Q8WVM7 1258 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 FBXL18Q96ME1 805 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 MPHOSPH6Q99547 160 aaKnown RBP12.84□□□□□ -0.35
CTSB-212ENST00000526645 RAD9AQ99638 391 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 WDR11Q9BZH6 1224 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 PUS7LQ9H0K6 701 aaKnown RBP12.84□□□□□ -0.35
CTSB-212ENST00000526645 BOLA2Q9H3K6 86 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 SUGCTQ9HAC7 445 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 PRKAG3Q9UGI9 489 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 CTNNA3Q9UI47 895 aa12.84□□□□□ -0.35
CTSB-212ENST00000526645 BRWD1Q9NSI6 2320 aa12.83□□□□□ -0.36
CTSB-212ENST00000526645 GRXCR2A6NFK2 248 aa12.83□□□□□ -0.36
CTSB-212ENST00000526645 MINDY4BA8MYZ0 360 aa12.83□□□□□ -0.36
CTSB-212ENST00000526645 GJB5O95377 273 aa12.83□□□□□ -0.36
CTSB-212ENST00000526645 IL9P15248 144 aa12.83□□□□□ -0.36
CTSB-212ENST00000526645 SLC1A4P43007 532 aa12.83□□□□□ -0.36
CTSB-212ENST00000526645 PPP2R5BQ15173 497 aa12.83□□□□□ -0.36
CTSB-212ENST00000526645 NSMFQ6X4W1 530 aa12.83□□□□□ -0.36
CTSB-212ENST00000526645 SPRED2Q7Z698 418 aa12.83□□□□□ -0.36
CTSB-212ENST00000526645 STRBPQ96SI9 672 aaKnown RBP12.83□□□□□ -0.36
CTSB-212ENST00000526645 ABHD14A-ACY1A0A1B0GW23 586 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 POTEB3A0JP26 581 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 LINC01553A4QN01 128 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 A6NJR5 290 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 GSG1L2A8MUP6 293 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 RAB11FIP3O75154 756 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 HMMRO75330 724 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 TSPY3P0CV98 308 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 TSPY8P0CW00 308 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 ALDH5A1P51649 535 aaPredicted RBP12.82□□□□□ -0.36
CTSB-212ENST00000526645 RBL2Q08999 1139 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 PTPROQ16827 1216 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 TIGD5Q53EQ6 642 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 MUM1L1Q5H9M0 696 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 TMEM63BQ5T3F8 832 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 POTEBQ6S5H4 581 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 MIER1Q8N108 512 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 NEDD1Q8NHV4 660 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 NEK9Q8TD19 979 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 CRBNQ96SW2 442 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 MTUS1Q9ULD2 1270 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 CCPG1Q9ULG6 757 aa12.82□□□□□ -0.36
CTSB-212ENST00000526645 CXCL10P02778 98 aa12.81□□□□□ -0.36
CTSB-212ENST00000526645 ICAM1P05362 532 aa12.81□□□□□ -0.36
CTSB-212ENST00000526645 SELPP16109 830 aa12.81□□□□□ -0.36
CTSB-212ENST00000526645 GNAT2P19087 354 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms