RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 ZNRF3Q9ULT6 936 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 PCDHA1Q9Y5I3 950 aa17.93■□□□□ 0.46
USH1C-204ENST00000526313 MYH7BA7E2Y1 1941 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 NRDCO43847 1150 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 TNNT1P13805 278 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 MMP14P50281 582 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 AGBL3Q8NEM8 1001 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 NELFBQ8WX92 580 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 ZBED3Q96IU2 234 aaPredicted RBP17.92■□□□□ 0.46
USH1C-204ENST00000526313 C16orf45Q96MC5 204 aaPredicted RBP17.92■□□□□ 0.46
USH1C-204ENST00000526313 NAP1L4Q99733 375 aaKnown RBP17.92■□□□□ 0.46
USH1C-204ENST00000526313 TRIM9Q9C026 710 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 GDAQ9Y2T3 454 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 A0A1W2PRG0 241 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 DYNC1I1O14576 645 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 GRB10Q13322 594 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 TMEM139Q8IV31 216 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 CRYGNQ8WXF5 182 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 HAS1Q92839 578 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 CALML4Q96GE6 196 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 MBOAT7Q96N66 472 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 PNMA5Q96PV4 448 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 PLIN2Q99541 437 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 LRWD1Q9UFC0 647 aa17.92■□□□□ 0.46
USH1C-204ENST00000526313 CYP3A7-CYP3A51PA0A087WV96 503 aa17.91■□□□□ 0.46
USH1C-204ENST00000526313 TCP10L2B9ZVM9 353 aa17.91■□□□□ 0.46
USH1C-204ENST00000526313 TBC1D12O60347 775 aa17.91■□□□□ 0.46
USH1C-204ENST00000526313 CYP3A7P24462 503 aa17.91■□□□□ 0.46
USH1C-204ENST00000526313 USP11P51784 963 aa17.91■□□□□ 0.46
USH1C-204ENST00000526313 TMEM266Q2M3C6 531 aa17.91■□□□□ 0.46
USH1C-204ENST00000526313 MCTP2Q6DN12 878 aa17.91■□□□□ 0.46
USH1C-204ENST00000526313 OGFOD1Q8N543 542 aa17.91■□□□□ 0.46
USH1C-204ENST00000526313 TC2NQ8N9U0 490 aa17.91■□□□□ 0.46
USH1C-204ENST00000526313 GTPBP4Q9BZE4 634 aaKnown RBP17.91■□□□□ 0.46
USH1C-204ENST00000526313 RAB34Q9BZG1 259 aa17.91■□□□□ 0.46
USH1C-204ENST00000526313 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.91■□□□□ 0.46
USH1C-204ENST00000526313 BLOC1S4Q9NUP1 217 aa17.91■□□□□ 0.46
USH1C-204ENST00000526313 STK17AQ9UEE5 414 aa17.91■□□□□ 0.46
USH1C-204ENST00000526313 H7C1D1 291 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 MEIS2O14770 477 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 TEX33O43247 280 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 BMP3P12645 472 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 AMPD3Q01432 767 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 PTPN21Q16825 1174 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 SYDE2Q5VT97 1194 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 AMNQ9BXJ7 453 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 DDX25Q9UHL0 483 aaKnown RBP17.9■□□□□ 0.46
USH1C-204ENST00000526313 TGFB2P61812 414 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 SPAG1Q07617 926 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 AP3B2Q13367 1082 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 COBLL1Q53SF7 1204 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 CNNM4Q6P4Q7 775 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 MOXD1Q6UVY6 613 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 FAM83AQ86UY5 434 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 PGAP2Q9UHJ9 254 aa17.9■□□□□ 0.46
USH1C-204ENST00000526313 ZBTB12Q9Y330 459 aaPredicted RBP17.9■□□□□ 0.46
USH1C-204ENST00000526313 CLRN2A0PK11 232 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 USP17L15C9J2P7 530 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 USP17L13C9JLJ4 530 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 USP17L11C9JVI0 530 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 USP17L18D6R9N7 530 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 USP17L22D6RA61 530 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 USP17L17D6RBQ6 530 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 USP17L19D6RCP7 530 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 USP17L20D6RJB6 530 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 USP17L24Q0WX57 530 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 USP17L6PQ6QN14 398 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 FCHSD1Q86WN1 690 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 NUP88Q99567 741 aaPredicted RBP17.89■□□□□ 0.45
USH1C-204ENST00000526313 TMX2Q9Y320 296 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 PAXBP1Q9Y5B6 917 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 MAP3K10Q02779 954 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 KRT31Q15323 416 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 PTPN14Q15678 1187 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 TMEM119Q4V9L6 283 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 IRF2BP1Q8IU81 584 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 TEX2Q8IWB9 1127 aa17.89■□□□□ 0.45
USH1C-204ENST00000526313 DHTKD1Q96HY7 919 aaPredicted RBP17.89■□□□□ 0.45
USH1C-204ENST00000526313 ITIH6Q6UXX5 1313 aa17.88■□□□□ 0.45
USH1C-204ENST00000526313 RAD21O60216 631 aa17.88■□□□□ 0.45
USH1C-204ENST00000526313 FILIP1LQ4L180 1135 aa17.88■□□□□ 0.45
USH1C-204ENST00000526313 TCP11X2Q5H9J9 407 aa17.88■□□□□ 0.45
USH1C-204ENST00000526313 HYIQ5T013 277 aa17.88■□□□□ 0.45
USH1C-204ENST00000526313 FBXO11Q86XK2 927 aa17.88■□□□□ 0.45
USH1C-204ENST00000526313 NIM1KQ8IY84 436 aa17.88■□□□□ 0.45
USH1C-204ENST00000526313 PPP1R13BQ96KQ4 1090 aa17.88■□□□□ 0.45
USH1C-204ENST00000526313 ANO3Q9BYT9 981 aa17.88■□□□□ 0.45
USH1C-204ENST00000526313 KCNMB3Q9NPA1 279 aa17.88■□□□□ 0.45
USH1C-204ENST00000526313 TRMT1Q9NXH9 659 aaKnown RBP17.88■□□□□ 0.45
USH1C-204ENST00000526313 PIM2Q9P1W9 311 aa17.88■□□□□ 0.45
USH1C-204ENST00000526313 KIF2AO00139 706 aaPredicted RBP17.87■□□□□ 0.45
USH1C-204ENST00000526313 SLC26A4O43511 780 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 STX10O60499 249 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 CXCL9Q07325 125 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 CEP135Q66GS9 1140 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 SV2BQ7L1I2 683 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 P2RX7Q99572 595 aaKnown RBP17.87■□□□□ 0.45
USH1C-204ENST00000526313 NUDT12Q9BQG2 462 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 POTEMA6NI47 508 aa17.87■□□□□ 0.45
USH1C-204ENST00000526313 RIOK3O14730 519 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms