RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 HOMER1Q86YM7 354 aa13.8□□□□□ -0.2
CDC27-202ENST00000525495 RAB11FIP4Q86YS3 637 aa13.8□□□□□ -0.2
CDC27-202ENST00000525495 PIGSQ96S52 555 aa13.8□□□□□ -0.2
CDC27-202ENST00000525495 XPNPEP3Q9NQH7 507 aa13.8□□□□□ -0.2
CDC27-202ENST00000525495 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
CDC27-202ENST00000525495 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.79□□□□□ -0.2
CDC27-202ENST00000525495 CCDC69A6NI79 296 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 ASB14A6NK59 587 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 H0YGN5 161 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 ADAMTS4O75173 837 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 REC8O95072 547 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 CPA1P15085 419 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 PTGS1P23219 599 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 IRX5P78411 483 aaPredicted RBP13.79□□□□□ -0.2
CDC27-202ENST00000525495 DHX32Q7L7V1 743 aaKnown RBP13.79□□□□□ -0.2
CDC27-202ENST00000525495 EEPD1Q7L9B9 569 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 SGMS1Q86VZ5 419 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 TMTC2Q8N394 836 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 ARRDC4Q8NCT1 418 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 RGS22Q8NE09 1264 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 MORC4Q8TE76 937 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 MAP3K14Q99558 947 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 AMNQ9BXJ7 453 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 SENP6Q9GZR1 1112 aaPredicted RBP13.79□□□□□ -0.2
CDC27-202ENST00000525495 PDGFCQ9NRA1 345 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 COL20A1Q9P218 1284 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 FAM184BQ9ULE4 1060 aa13.79□□□□□ -0.2
CDC27-202ENST00000525495 SYNRGQ9UMZ2 1314 aa13.78□□□□□ -0.2
CDC27-202ENST00000525495 EVI5O60447 810 aa13.78□□□□□ -0.2
CDC27-202ENST00000525495 PLEKHA8P1O95397 391 aa13.78□□□□□ -0.2
CDC27-202ENST00000525495 KRT32Q14532 448 aa13.78□□□□□ -0.2
CDC27-202ENST00000525495 LRRC26Q2I0M4 334 aa13.78□□□□□ -0.2
CDC27-202ENST00000525495 TMEM63BQ5T3F8 832 aa13.78□□□□□ -0.2
CDC27-202ENST00000525495 FBXO16Q8IX29 292 aaPredicted RBP13.78□□□□□ -0.2
CDC27-202ENST00000525495 CMTR1Q8N1G2 835 aaKnown RBP13.78□□□□□ -0.2
CDC27-202ENST00000525495 CTCFLQ8NI51 663 aaPredicted RBP13.78□□□□□ -0.2
CDC27-202ENST00000525495 ADD3Q9UEY8 706 aaKnown RBP13.78□□□□□ -0.2
CDC27-202ENST00000525495 MRPL11Q9Y3B7 192 aaKnown RBP13.78□□□□□ -0.2
CDC27-202ENST00000525495 PCDHA1Q9Y5I3 950 aa13.78□□□□□ -0.2
CDC27-202ENST00000525495 MYADML2A6NDP7 307 aa13.77□□□□□ -0.21
CDC27-202ENST00000525495 KBTBD13C9JR72 458 aa13.77□□□□□ -0.21
CDC27-202ENST00000525495 DUSP11O75319 330 aaKnown RBP13.77□□□□□ -0.21
CDC27-202ENST00000525495 ADCYAP1R1P41586 468 aa13.77□□□□□ -0.21
CDC27-202ENST00000525495 TAPT1Q6NXT6 567 aa13.77□□□□□ -0.21
CDC27-202ENST00000525495 SRBD1Q8N5C6 995 aaKnown RBP13.77□□□□□ -0.21
CDC27-202ENST00000525495 SYTL5Q8TDW5 730 aaPredicted RBP13.77□□□□□ -0.21
CDC27-202ENST00000525495 PIBF1Q8WXW3 757 aa13.77□□□□□ -0.21
CDC27-202ENST00000525495 JAKMIP1Q96N16 626 aaKnown RBP13.77□□□□□ -0.21
CDC27-202ENST00000525495 PCDH10Q9P2E7 1040 aa13.77□□□□□ -0.21
CDC27-202ENST00000525495 BRPF3Q9ULD4 1205 aa13.77□□□□□ -0.21
CDC27-202ENST00000525495 SLC12A7Q9Y666 1083 aa13.77□□□□□ -0.21
CDC27-202ENST00000525495 RANBP2P49792 3224 aaKnown RBP13.76□□□□□ -0.21
CDC27-202ENST00000525495 PNMA6FA0A0J9YX94 578 aa13.76□□□□□ -0.21
CDC27-202ENST00000525495 EDNRBP24530 442 aa13.76□□□□□ -0.21
CDC27-202ENST00000525495 KIF5BP33176 963 aa13.76□□□□□ -0.21
CDC27-202ENST00000525495 ATN1P54259 1190 aaPredicted RBP13.76□□□□□ -0.21
CDC27-202ENST00000525495 APOA5Q6Q788 366 aa13.76□□□□□ -0.21
CDC27-202ENST00000525495 MICU3Q86XE3 530 aa13.76□□□□□ -0.21
CDC27-202ENST00000525495 MCF2L2Q86YR7 1114 aa13.76□□□□□ -0.21
CDC27-202ENST00000525495 C7orf61Q8IZ16 206 aa13.76□□□□□ -0.21
CDC27-202ENST00000525495 KLHDC9Q8NEP7 349 aa13.76□□□□□ -0.21
CDC27-202ENST00000525495 DNERQ8NFT8 737 aa13.76□□□□□ -0.21
CDC27-202ENST00000525495 FERMT2Q96AC1 680 aa13.76□□□□□ -0.21
CDC27-202ENST00000525495 TAAR1Q96RJ0 339 aa13.76□□□□□ -0.21
CDC27-202ENST00000525495 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
CDC27-202ENST00000525495 GNEQ9Y223 722 aaKnown RBP13.76□□□□□ -0.21
CDC27-202ENST00000525495 LOC102724159A0A0B4J2E5 919 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 CTAGE5O15320 804 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 CFBP00751 764 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 CALM1P0DP23 149 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 CALM2P0DP24 149 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 CALM3P0DP25 149 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 SMPD1P17405 629 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 HSD17B4P51659 736 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 GHRHRQ02643 423 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 TNFAIP2Q03169 654 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 PWP2Q15269 919 aaKnown RBP13.75□□□□□ -0.21
CDC27-202ENST00000525495 CCSAPQ6IQ19 270 aaPredicted RBP13.75□□□□□ -0.21
CDC27-202ENST00000525495 RNF180Q86T96 592 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 FANCBQ8NB91 859 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 USP26Q9BXU7 913 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 UPF3AQ9H1J1 476 aaKnown RBP13.75□□□□□ -0.21
CDC27-202ENST00000525495 VTA1Q9NP79 307 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 PHF24Q9UPV7 400 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 NR2E3Q9Y5X4 410 aa13.75□□□□□ -0.21
CDC27-202ENST00000525495 HMGB1P09429 215 aaKnown RBP13.74□□□□□ -0.21
CDC27-202ENST00000525495 C6orf222P0C671 652 aaPredicted RBP13.74□□□□□ -0.21
CDC27-202ENST00000525495 SMARCA1P28370 1054 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 HOXA13P31271 388 aaPredicted RBP13.74□□□□□ -0.21
CDC27-202ENST00000525495 GJA9P57773 515 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 TMTC3Q6ZXV5 915 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 CCDC82Q8N4S0 544 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 MAF1Q9H063 256 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 KIAA1217Q5T5P2 1943 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 KLF18A0A0U1RQI7 1052 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 A0A1W2PQ45 241 aaPredicted RBP13.74□□□□□ -0.21
CDC27-202ENST00000525495 A0A1W2PQY0 241 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 hCG_1642624A0A1W2PR95 340 aa13.74□□□□□ -0.21
CDC27-202ENST00000525495 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
CDC27-202ENST00000525495 CST5P28325 142 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms