RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 COLQQ9Y215 455 aaPredicted RBP20.35■□□□□ 0.85
NR1H3-228ENST00000525441 MOXD2PA6NHM9 499 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 C6orf222P0C671 652 aaPredicted RBP20.34■□□□□ 0.85
NR1H3-228ENST00000525441 CALM1P0DP23 149 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 CALM2P0DP24 149 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 CALM3P0DP25 149 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 CST5P28325 142 aaPredicted RBP20.34■□□□□ 0.85
NR1H3-228ENST00000525441 GNAQP50148 359 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 GJA9P57773 515 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 RTP1P59025 263 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 PDE4DQ08499 809 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 TSGA10IPQ3SY00 556 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 HABP4Q5JVS0 413 aaKnown RBP20.34■□□□□ 0.85
NR1H3-228ENST00000525441 EEPD1Q7L9B9 569 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 HOMER1Q86YM7 354 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 FBXO16Q8IX29 292 aaPredicted RBP20.34■□□□□ 0.85
NR1H3-228ENST00000525441 KLHDC9Q8NEP7 349 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 LZTS2Q9BRK4 669 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 GPHNQ9NQX3 736 aaPredicted RBP20.34■□□□□ 0.85
NR1H3-228ENST00000525441 PCDHA1Q9Y5I3 950 aa20.34■□□□□ 0.85
NR1H3-228ENST00000525441 REC8O95072 547 aa20.33■□□□□ 0.85
NR1H3-228ENST00000525441 AP5M1Q9H0R1 490 aa20.33■□□□□ 0.85
NR1H3-228ENST00000525441 ATP11BQ9Y2G3 1177 aa20.33■□□□□ 0.85
NR1H3-228ENST00000525441 SLC12A7Q9Y666 1083 aa20.33■□□□□ 0.85
NR1H3-228ENST00000525441 DDX49Q9Y6V7 483 aaKnown RBP20.33■□□□□ 0.85
NR1H3-228ENST00000525441 LCTP09848 1927 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 MYH6P13533 1939 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 PNMA6FA0A0J9YX94 578 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 A0A1W2PQ45 241 aaPredicted RBP20.32■□□□□ 0.84
NR1H3-228ENST00000525441 A0A1W2PQY0 241 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 ADCY6O43306 1168 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 HMGB1P09429 215 aaKnown RBP20.32■□□□□ 0.84
NR1H3-228ENST00000525441 ACLYP53396 1101 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 SNX17Q15036 470 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 KCNA10Q16322 511 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 GNASQ5JWF2 1037 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 C1orf53Q5VUE5 145 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 TAPT1Q6NXT6 567 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 SYNE3Q6ZMZ3 975 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 SAMD3Q8N6K7 520 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 SYTL5Q8TDW5 730 aaPredicted RBP20.32■□□□□ 0.84
NR1H3-228ENST00000525441 NSUN6Q8TEA1 469 aaKnown RBP20.32■□□□□ 0.84
NR1H3-228ENST00000525441 PIGSQ96S52 555 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 MYL10Q9BUA6 226 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 PRKAG2Q9UGJ0 569 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 Q9Y3F1 56 aa20.32■□□□□ 0.84
NR1H3-228ENST00000525441 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.31■□□□□ 0.84
NR1H3-228ENST00000525441 SMPD1P17405 629 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 SYN1P17600 705 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 EDNRBP24530 442 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 SMARCA1P28370 1054 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 NKX3-2P78367 333 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 SLC35G1Q2M3R5 365 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 DHX32Q7L7V1 743 aaKnown RBP20.31■□□□□ 0.84
NR1H3-228ENST00000525441 TLK2Q86UE8 772 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 RASEFQ8IZ41 740 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 TBC1D5Q92609 795 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 SPZ1Q9BXG8 430 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 LRRC2Q9BYS8 371 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 STARD7Q9NQZ5 370 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 PDGFCQ9NRA1 345 aa20.31■□□□□ 0.84
NR1H3-228ENST00000525441 MAP3K20Q9NYL2 800 aaKnown RBP20.31■□□□□ 0.84
NR1H3-228ENST00000525441 GNEQ9Y223 722 aaKnown RBP20.31■□□□□ 0.84
NR1H3-228ENST00000525441 MYADML2A6NDP7 307 aa20.3■□□□□ 0.84
NR1H3-228ENST00000525441 CYTH3O43739 400 aa20.3■□□□□ 0.84
NR1H3-228ENST00000525441 ZEB2O60315 1214 aa20.3■□□□□ 0.84
NR1H3-228ENST00000525441 PPP1R11O60927 126 aaPredicted RBP20.3■□□□□ 0.84
NR1H3-228ENST00000525441 CFBP00751 764 aa20.3■□□□□ 0.84
NR1H3-228ENST00000525441 TRIM60Q495X7 471 aa20.3■□□□□ 0.84
NR1H3-228ENST00000525441 CCSAPQ6IQ19 270 aaPredicted RBP20.3■□□□□ 0.84
NR1H3-228ENST00000525441 SGMS1Q86VZ5 419 aa20.3■□□□□ 0.84
NR1H3-228ENST00000525441 RRP36Q96EU6 259 aaKnown RBP20.3■□□□□ 0.84
NR1H3-228ENST00000525441 GLT1D1Q96MS3 346 aa20.3■□□□□ 0.84
NR1H3-228ENST00000525441 IWS1Q96ST2 819 aa20.3■□□□□ 0.84
NR1H3-228ENST00000525441 RMDN3Q96TC7 470 aa20.3■□□□□ 0.84
NR1H3-228ENST00000525441 LRRC37A2A6NM11 1700 aa20.3■□□□□ 0.84
NR1H3-228ENST00000525441 TRIOBPQ9H2D6 2365 aa20.29■□□□□ 0.84
NR1H3-228ENST00000525441 RBM47A0AV96 593 aaKnown RBP20.29■□□□□ 0.84
NR1H3-228ENST00000525441 DYNC1LI2O43237 492 aaPredicted RBP20.29■□□□□ 0.84
NR1H3-228ENST00000525441 ASGR1P07306 291 aa20.29■□□□□ 0.84
NR1H3-228ENST00000525441 HSD17B4P51659 736 aa20.29■□□□□ 0.84
NR1H3-228ENST00000525441 GHRHRQ02643 423 aa20.29■□□□□ 0.84
NR1H3-228ENST00000525441 COL9A3Q14050 684 aaPredicted RBP20.29■□□□□ 0.84
NR1H3-228ENST00000525441 FSCN1Q16658 493 aaKnown RBP20.29■□□□□ 0.84
NR1H3-228ENST00000525441 DUSP28Q4G0W2 176 aa20.29■□□□□ 0.84
NR1H3-228ENST00000525441 SCFD2Q8WU76 684 aa20.29■□□□□ 0.84
NR1H3-228ENST00000525441 TAAR1Q96RJ0 339 aa20.29■□□□□ 0.84
NR1H3-228ENST00000525441 WDR11Q9BZH6 1224 aa20.29■□□□□ 0.84
NR1H3-228ENST00000525441 RBM27Q9P2N5 1060 aaKnown RBP20.29■□□□□ 0.84
NR1H3-228ENST00000525441 SEC63Q9UGP8 760 aaKnown RBP20.29■□□□□ 0.84
NR1H3-228ENST00000525441 BAZ2BQ9UIF8 2168 aaKnown RBP20.29■□□□□ 0.84
NR1H3-228ENST00000525441 ELP1O95163 1332 aa20.28■□□□□ 0.84
NR1H3-228ENST00000525441 NKRFO15226 690 aaKnown RBP eCLIP20.28■□□□□ 0.84
NR1H3-228ENST00000525441 HSPA4P34932 840 aa20.28■□□□□ 0.84
NR1H3-228ENST00000525441 EXOSC10Q01780 885 aaKnown RBP20.28■□□□□ 0.84
NR1H3-228ENST00000525441 ADCK5Q3MIX3 580 aa20.28■□□□□ 0.84
NR1H3-228ENST00000525441 ARHGEF16Q5VV41 709 aa20.28■□□□□ 0.84
NR1H3-228ENST00000525441 KCNB2Q92953 911 aa20.28■□□□□ 0.84
NR1H3-228ENST00000525441 VTI1AQ96AJ9 217 aa20.28■□□□□ 0.84
NR1H3-228ENST00000525441 GDF15Q99988 308 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms