RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 NR1I3Q14994 352 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 BICRALQ6AI39 1079 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 MRM1Q6IN84 353 aaKnown RBP8.51□□□□□ -1.05
COPB1-203ENST00000525214 PAQR3Q6TCH7 311 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 CPNE8Q86YQ8 564 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 TRIM59Q8IWR1 403 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 FAM178BQ8IXR5 827 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 PANK1Q8TE04 598 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 PLA2G2DQ9UNK4 145 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 PCDHA5Q9Y5H7 936 aa8.51□□□□□ -1.05
COPB1-203ENST00000525214 TBX1O43435 398 aa8.5□□□□□ -1.05
COPB1-203ENST00000525214 NAT2P11245 290 aa8.5□□□□□ -1.05
COPB1-203ENST00000525214 ARID5AQ03989 594 aa8.5□□□□□ -1.05
COPB1-203ENST00000525214 SCRN1Q12765 414 aa8.5□□□□□ -1.05
COPB1-203ENST00000525214 GTF2IRD2BQ6EKJ0 949 aa8.5□□□□□ -1.05
COPB1-203ENST00000525214 GTF2IRD2Q86UP8 949 aa8.5□□□□□ -1.05
COPB1-203ENST00000525214 TMEFF1Q8IYR6 380 aa8.5□□□□□ -1.05
COPB1-203ENST00000525214 IRAK3Q9Y616 596 aa8.5□□□□□ -1.05
COPB1-203ENST00000525214 GLI4P10075 376 aa8.49□□□□□ -1.05
COPB1-203ENST00000525214 PAMP19021 973 aa8.49□□□□□ -1.05
COPB1-203ENST00000525214 NCKAP1LP55160 1127 aa8.49□□□□□ -1.05
COPB1-203ENST00000525214 MBLAC2Q68D91 279 aa8.49□□□□□ -1.05
COPB1-203ENST00000525214 POMZP3Q6PJE2 187 aa8.49□□□□□ -1.05
COPB1-203ENST00000525214 ZC3H14Q6PJT7 736 aaKnown RBP8.49□□□□□ -1.05
COPB1-203ENST00000525214 GPRC5CQ9NQ84 441 aa8.49□□□□□ -1.05
COPB1-203ENST00000525214 RWDD3Q9Y3V2 267 aa8.49□□□□□ -1.05
COPB1-203ENST00000525214 IRS2Q9Y4H2 1338 aa8.49□□□□□ -1.05
COPB1-203ENST00000525214 NPHP3-ACAD11A0A0J9YXS1 232 aa8.48□□□□□ -1.05
COPB1-203ENST00000525214 SUSD5O60279 629 aa8.48□□□□□ -1.05
COPB1-203ENST00000525214 PLS3P13797 630 aa8.48□□□□□ -1.05
COPB1-203ENST00000525214 FBLN1P23142 703 aa8.48□□□□□ -1.05
COPB1-203ENST00000525214 DNAJA1P31689 397 aaKnown RBP8.48□□□□□ -1.05
COPB1-203ENST00000525214 ZNF200P98182 395 aaPredicted RBP8.48□□□□□ -1.05
COPB1-203ENST00000525214 ZNF385BQ569K4 471 aa8.48□□□□□ -1.05
COPB1-203ENST00000525214 CRACR2BQ8N4Y2 399 aaPredicted RBP8.48□□□□□ -1.05
COPB1-203ENST00000525214 SLC43A3Q8NBI5 491 aa8.48□□□□□ -1.05
COPB1-203ENST00000525214 GMLQ99445 158 aa8.48□□□□□ -1.05
COPB1-203ENST00000525214 MTA3Q9BTC8 594 aa8.48□□□□□ -1.05
COPB1-203ENST00000525214 NKX2-4Q9H2Z4 354 aa8.48□□□□□ -1.05
COPB1-203ENST00000525214 CLEC1BQ9P126 229 aa8.48□□□□□ -1.05
COPB1-203ENST00000525214 GULP1Q9UBP9 304 aa8.48□□□□□ -1.05
COPB1-203ENST00000525214 A0A1W2PQJ5 194 aa8.47□□□□□ -1.05
COPB1-203ENST00000525214 C7orf72A4D263 438 aa8.47□□□□□ -1.05
COPB1-203ENST00000525214 NOP56O00567 594 aaKnown RBP8.47□□□□□ -1.05
COPB1-203ENST00000525214 THBDP07204 575 aa8.47□□□□□ -1.05
COPB1-203ENST00000525214 ZNF227Q86WZ6 799 aa8.47□□□□□ -1.05
COPB1-203ENST00000525214 BTN2A2Q8WVV5 523 aa8.47□□□□□ -1.05
COPB1-203ENST00000525214 PPP1R14AQ96A00 147 aa8.47□□□□□ -1.05
COPB1-203ENST00000525214 DACT3Q96B18 629 aaPredicted RBP8.47□□□□□ -1.05
COPB1-203ENST00000525214 PODXL2Q9NZ53 605 aa8.47□□□□□ -1.05
COPB1-203ENST00000525214 ZC3H12DA2A288 527 aaKnown RBP8.46□□□□□ -1.06
COPB1-203ENST00000525214 F8W031 263 aaPredicted RBP8.46□□□□□ -1.06
COPB1-203ENST00000525214 RFXAPO00287 272 aa8.46□□□□□ -1.06
COPB1-203ENST00000525214 DDAH1O94760 285 aa8.46□□□□□ -1.06
COPB1-203ENST00000525214 ITGAVP06756 1048 aa8.46□□□□□ -1.06
COPB1-203ENST00000525214 IGFBP6P24592 240 aaPredicted RBP8.46□□□□□ -1.06
COPB1-203ENST00000525214 FXNQ16595 210 aa8.46□□□□□ -1.06
COPB1-203ENST00000525214 FAM129CQ86XR2 697 aa8.46□□□□□ -1.06
COPB1-203ENST00000525214 LZTR1Q8N653 840 aa8.46□□□□□ -1.06
COPB1-203ENST00000525214 MMP19Q99542 508 aa8.46□□□□□ -1.06
COPB1-203ENST00000525214 RXFP1Q9HBX9 757 aa8.46□□□□□ -1.06
COPB1-203ENST00000525214 CYP26B1Q9NR63 512 aa8.46□□□□□ -1.06
COPB1-203ENST00000525214 ADAMTS20P59510 1910 aa8.45□□□□□ -1.06
COPB1-203ENST00000525214 TRBV23OR9-2A0A075B6M9 112 aa8.45□□□□□ -1.06
COPB1-203ENST00000525214 ARNTLO00327 626 aa8.45□□□□□ -1.06
COPB1-203ENST00000525214 GJB6O95452 261 aa8.45□□□□□ -1.06
COPB1-203ENST00000525214 PRR5P85299 388 aa8.45□□□□□ -1.06
COPB1-203ENST00000525214 SV2CQ496J9 727 aa8.45□□□□□ -1.06
COPB1-203ENST00000525214 LCE1DQ5T752 114 aa8.45□□□□□ -1.06
COPB1-203ENST00000525214 NPLOC4Q8TAT6 608 aa8.45□□□□□ -1.06
COPB1-203ENST00000525214 FRS2Q8WU20 508 aa8.45□□□□□ -1.06
COPB1-203ENST00000525214 HNRNPLLQ8WVV9 542 aaKnown RBP8.45□□□□□ -1.06
COPB1-203ENST00000525214 BUB1BO60566 1050 aaPredicted RBP8.44□□□□□ -1.06
COPB1-203ENST00000525214 INF2Q27J81 1249 aa8.44□□□□□ -1.06
COPB1-203ENST00000525214 CELF2-AS1Q8N7Q2 184 aa8.44□□□□□ -1.06
COPB1-203ENST00000525214 DPF3Q92784 378 aa8.44□□□□□ -1.06
COPB1-203ENST00000525214 NPHS1O60500 1241 aa8.43□□□□□ -1.06
COPB1-203ENST00000525214 CAPNS1P04632 268 aa8.43□□□□□ -1.06
COPB1-203ENST00000525214 SF1Q15637 639 aaKnown RBP8.43□□□□□ -1.06
COPB1-203ENST00000525214 TCERG1LQ5VWI1 586 aa8.43□□□□□ -1.06
COPB1-203ENST00000525214 E9PSI1 815 aa8.42□□□□□ -1.06
COPB1-203ENST00000525214 LIMS1P48059 325 aa8.42□□□□□ -1.06
COPB1-203ENST00000525214 SLC10A6Q3KNW5 377 aa8.42□□□□□ -1.06
COPB1-203ENST00000525214 CNKSR3Q6P9H4 555 aa8.42□□□□□ -1.06
COPB1-203ENST00000525214 TTLL10Q6ZVT0 673 aa8.42□□□□□ -1.06
COPB1-203ENST00000525214 ANKS3Q6ZW76 656 aa8.42□□□□□ -1.06
COPB1-203ENST00000525214 CCDC103Q8IW40 242 aa8.42□□□□□ -1.06
COPB1-203ENST00000525214 NETO2Q8NC67 525 aa8.42□□□□□ -1.06
COPB1-203ENST00000525214 KREMEN2Q8NCW0 462 aa8.42□□□□□ -1.06
COPB1-203ENST00000525214 PLEKHO2Q8TD55 490 aa8.42□□□□□ -1.06
COPB1-203ENST00000525214 BCAS3Q9H6U6 928 aa8.42□□□□□ -1.06
COPB1-203ENST00000525214 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.42□□□□□ -1.061e-6■■■■□ 24.4
COPB1-203ENST00000525214 TMEFF2Q9UIK5 374 aaPredicted RBP8.42□□□□□ -1.06
COPB1-203ENST00000525214 KLF4O43474 513 aa8.41□□□□□ -1.06
COPB1-203ENST00000525214 SCG5P05408 212 aa8.41□□□□□ -1.06
COPB1-203ENST00000525214 ATF2P15336 505 aa8.41□□□□□ -1.06
COPB1-203ENST00000525214 AFF3P51826 1226 aaKnown RBP8.41□□□□□ -1.06
COPB1-203ENST00000525214 WWC2Q6AWC2 1192 aa8.41□□□□□ -1.06
COPB1-203ENST00000525214 CABP7Q86V35 215 aa8.41□□□□□ -1.06
COPB1-203ENST00000525214 TMEM151BQ8IW70 566 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms