RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 JMJD4Q9H9V9 463 aa21.64■■□□□ 1.05
CAPN1-203ENST00000525013 LTBP2Q14767 1821 aa21.64■■□□□ 1.05
CAPN1-203ENST00000525013 SZT2Q5T011 3432 aa21.63■■□□□ 1.05
CAPN1-203ENST00000525013 ABCB11O95342 1321 aa21.63■■□□□ 1.05
CAPN1-203ENST00000525013 KLRF2D3W0D1 207 aa21.63■■□□□ 1.05
CAPN1-203ENST00000525013 SOX1O00570 391 aaPredicted RBP21.63■■□□□ 1.05
CAPN1-203ENST00000525013 DYNC1LI2O43237 492 aaPredicted RBP21.63■■□□□ 1.05
CAPN1-203ENST00000525013 PDE4DQ08499 809 aa21.63■■□□□ 1.05
CAPN1-203ENST00000525013 STOX1Q6ZVD7 989 aa21.63■■□□□ 1.05
CAPN1-203ENST00000525013 FBXO11Q86XK2 927 aa21.63■■□□□ 1.05
CAPN1-203ENST00000525013 GNEQ9Y223 722 aaKnown RBP21.63■■□□□ 1.05
CAPN1-203ENST00000525013 LAMA3Q16787 3333 aa21.62■■□□□ 1.05
CAPN1-203ENST00000525013 ELP1O95163 1332 aa21.62■■□□□ 1.05
CAPN1-203ENST00000525013 LOC102724159A0A0B4J2E5 919 aa21.62■■□□□ 1.05
CAPN1-203ENST00000525013 TRIM43BA6NCK2 446 aa21.62■■□□□ 1.05
CAPN1-203ENST00000525013 DCDC2CA8MYV0 355 aa21.62■■□□□ 1.05
CAPN1-203ENST00000525013 CLTBP09497 229 aa21.62■■□□□ 1.05
CAPN1-203ENST00000525013 PTGS1P23219 599 aa21.62■■□□□ 1.05
CAPN1-203ENST00000525013 WTAPQ15007 396 aa21.62■■□□□ 1.05
CAPN1-203ENST00000525013 PWP2Q15269 919 aaKnown RBP21.62■■□□□ 1.05
CAPN1-203ENST00000525013 FSCN1Q16658 493 aaKnown RBP21.62■■□□□ 1.05
CAPN1-203ENST00000525013 TMEM67Q5HYA8 995 aa21.62■■□□□ 1.05
CAPN1-203ENST00000525013 RGS22Q8NE09 1264 aa21.62■■□□□ 1.05
CAPN1-203ENST00000525013 TRIM43Q96BQ3 446 aaPredicted RBP21.62■■□□□ 1.05
CAPN1-203ENST00000525013 LRCH3Q96II8 777 aa21.62■■□□□ 1.05
CAPN1-203ENST00000525013 ESYT1Q9BSJ8 1104 aa21.62■■□□□ 1.05
CAPN1-203ENST00000525013 B4DLN1 442 aa21.61■■□□□ 1.05
CAPN1-203ENST00000525013 CTAGE5O15320 804 aa21.61■■□□□ 1.05
CAPN1-203ENST00000525013 MRPL12P52815 198 aaKnown RBP21.61■■□□□ 1.05
CAPN1-203ENST00000525013 TMEM63BQ5T3F8 832 aa21.61■■□□□ 1.05
CAPN1-203ENST00000525013 DNERQ8NFT8 737 aa21.61■■□□□ 1.05
CAPN1-203ENST00000525013 TBC1D5Q92609 795 aa21.61■■□□□ 1.05
CAPN1-203ENST00000525013 BADQ92934 168 aa21.61■■□□□ 1.05
CAPN1-203ENST00000525013 LSG1Q9H089 658 aaKnown RBP21.61■■□□□ 1.05
CAPN1-203ENST00000525013 SENP2Q9HC62 589 aa21.61■■□□□ 1.05
CAPN1-203ENST00000525013 TMEM39AQ9NV64 488 aa21.61■■□□□ 1.05
CAPN1-203ENST00000525013 MAD2L2Q9UI95 211 aa21.61■■□□□ 1.05
CAPN1-203ENST00000525013 MRPL11Q9Y3B7 192 aaKnown RBP21.61■■□□□ 1.05
CAPN1-203ENST00000525013 PALM3A6NDB9 673 aaPredicted RBP21.6■■□□□ 1.05
CAPN1-203ENST00000525013 BMP2KLQ5H9B9 411 aa21.6■■□□□ 1.05
CAPN1-203ENST00000525013 MCF2L2Q86YR7 1114 aa21.6■■□□□ 1.05
CAPN1-203ENST00000525013 WDR11Q9BZH6 1224 aa21.6■■□□□ 1.05
CAPN1-203ENST00000525013 ANO2Q9NQ90 1003 aa21.6■■□□□ 1.05
CAPN1-203ENST00000525013 A0A0U1RQG5 324 aaPredicted RBP21.59■■□□□ 1.05
CAPN1-203ENST00000525013 ZEB2O60315 1214 aa21.59■■□□□ 1.05
CAPN1-203ENST00000525013 RAG1P15918 1043 aa21.59■■□□□ 1.05
CAPN1-203ENST00000525013 NKX3-2P78367 333 aa21.59■■□□□ 1.05
CAPN1-203ENST00000525013 GRM4Q14833 912 aa21.59■■□□□ 1.05
CAPN1-203ENST00000525013 DUSP28Q4G0W2 176 aa21.59■■□□□ 1.05
CAPN1-203ENST00000525013 CXCL17Q6UXB2 119 aa21.59■■□□□ 1.05
CAPN1-203ENST00000525013 ANKRD33Q7Z3H0 272 aa21.59■■□□□ 1.05
CAPN1-203ENST00000525013 CATIPQ7Z7H3 387 aa21.59■■□□□ 1.05
CAPN1-203ENST00000525013 MB21D2Q8IYB1 491 aaPredicted RBP21.59■■□□□ 1.05
CAPN1-203ENST00000525013 TOX2Q96NM4 488 aa21.59■■□□□ 1.05
CAPN1-203ENST00000525013 AMNQ9BXJ7 453 aa21.59■■□□□ 1.05
CAPN1-203ENST00000525013 Q9Y3F1 56 aa21.59■■□□□ 1.05
CAPN1-203ENST00000525013 MROH7Q68CQ1 1323 aa21.58■■□□□ 1.05
CAPN1-203ENST00000525013 KIAA0355O15063 1070 aa21.58■■□□□ 1.05
CAPN1-203ENST00000525013 ANTXR2P58335 489 aa21.58■■□□□ 1.05
CAPN1-203ENST00000525013 FAAP100Q0VG06 881 aa21.58■■□□□ 1.05
CAPN1-203ENST00000525013 LRIT3Q3SXY7 679 aa21.58■■□□□ 1.05
CAPN1-203ENST00000525013 HOMER1Q86YM7 354 aa21.58■■□□□ 1.05
CAPN1-203ENST00000525013 SYTL5Q8TDW5 730 aaPredicted RBP21.58■■□□□ 1.05
CAPN1-203ENST00000525013 ARVCFO00192 962 aa21.57■■□□□ 1.04
CAPN1-203ENST00000525013 ZBTB5O15062 677 aa21.57■■□□□ 1.04
CAPN1-203ENST00000525013 EDNRBP24530 442 aa21.57■■□□□ 1.04
CAPN1-203ENST00000525013 CASC1Q6TDU7 716 aa21.57■■□□□ 1.04
CAPN1-203ENST00000525013 IGDCC4Q8TDY8 1250 aa21.57■■□□□ 1.04
CAPN1-203ENST00000525013 CCDC136Q96JN2 1154 aa21.57■■□□□ 1.04
CAPN1-203ENST00000525013 TAAR1Q96RJ0 339 aa21.57■■□□□ 1.04
CAPN1-203ENST00000525013 MAF1Q9H063 256 aa21.57■■□□□ 1.04
CAPN1-203ENST00000525013 PCDHA1Q9Y5I3 950 aa21.57■■□□□ 1.04
CAPN1-203ENST00000525013 RBM47A0AV96 593 aaKnown RBP21.56■■□□□ 1.04
CAPN1-203ENST00000525013 SLC27A2O14975 620 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 PRC1O43663 620 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 CABYRO75952 493 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 CFBP00751 764 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 ITGB8P26012 769 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 CDK7P50613 346 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 TROAPQ12815 778 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 PPP2R5BQ15173 497 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 CREB3L3Q68CJ9 461 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 NSUN6Q8TEA1 469 aaKnown RBP21.56■■□□□ 1.04
CAPN1-203ENST00000525013 SCFD2Q8WU76 684 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 MTMR8Q96EF0 704 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 RMDN3Q96TC7 470 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 COL20A1Q9P218 1284 aa21.56■■□□□ 1.04
CAPN1-203ENST00000525013 PPP1R11O60927 126 aaPredicted RBP21.55■■□□□ 1.04
CAPN1-203ENST00000525013 MCM5P33992 734 aa21.55■■□□□ 1.04
CAPN1-203ENST00000525013 OR6J1Q8NGC5 347 aa21.55■■□□□ 1.04
CAPN1-203ENST00000525013 PIGSQ96S52 555 aa21.55■■□□□ 1.04
CAPN1-203ENST00000525013 GPHNQ9NQX3 736 aaPredicted RBP21.55■■□□□ 1.04
CAPN1-203ENST00000525013 KIAA1217Q5T5P2 1943 aa21.55■■□□□ 1.04
CAPN1-203ENST00000525013 LAMA2P24043 3122 aaKnown RBP21.54■■□□□ 1.04
CAPN1-203ENST00000525013 TLR3O15455 904 aaKnown RBP21.54■■□□□ 1.04
CAPN1-203ENST00000525013 NECTIN1Q15223 517 aa21.54■■□□□ 1.04
CAPN1-203ENST00000525013 SHHQ15465 462 aa21.54■■□□□ 1.04
CAPN1-203ENST00000525013 SLC35G1Q2M3R5 365 aa21.54■■□□□ 1.04
CAPN1-203ENST00000525013 ARHGEF16Q5VV41 709 aa21.54■■□□□ 1.04
CAPN1-203ENST00000525013 NFXL1Q6ZNB6 911 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms