RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ZC3H12DA2A288 527 aaKnown RBP3.07□□□□□ -1.92
CD44-212ENST00000524922 CD3EP07766 207 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 TACR1P25103 407 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 L1CAMP32004 1257 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 GJA8P48165 433 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 FOXO4P98177 505 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 PAK2Q13177 524 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 MBLAC2Q68D91 279 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 CCDC81Q6ZN84 652 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 B3GNT8Q7Z7M8 397 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 TSPAN17Q96FV3 270 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 SHDQ96IW2 340 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 ZDHHC15Q96MV8 337 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 FERD3LQ96RJ6 166 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 RNF38Q9H0F5 515 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 WHRNQ9P202 907 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 PCDHB10Q9UN67 800 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 DIS3Q9Y2L1 958 aaKnown RBP3.07□□□□□ -1.92
CD44-212ENST00000524922 DUSP10Q9Y6W6 482 aa3.07□□□□□ -1.92
CD44-212ENST00000524922 F8W031 263 aaPredicted RBP3.06□□□□□ -1.92
CD44-212ENST00000524922 ARNTLO00327 626 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 NOBOXO60393 691 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 EPHX1P07099 455 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 ITGA4P13612 1032 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 PMLP29590 882 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 COL9A2Q14055 689 aaPredicted RBP3.06□□□□□ -1.92
CD44-212ENST00000524922 RTP5Q14D33 572 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 TARBP2Q15633 366 aaKnown RBP3.06□□□□□ -1.92
CD44-212ENST00000524922 NOL9Q5SY16 702 aaKnown RBP3.06□□□□□ -1.92
CD44-212ENST00000524922 EEF1DP3Q658K8 133 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 CWF19L1Q69YN2 538 aaKnown RBP3.06□□□□□ -1.92
CD44-212ENST00000524922 FAM169BQ8N8A8 192 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 NAT16Q8N8M0 369 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 ADCY4Q8NFM4 1077 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 CPA5Q8WXQ8 436 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 COPS5Q92905 334 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 RCC1LQ96I51 464 aaKnown RBP3.06□□□□□ -1.92
CD44-212ENST00000524922 NOX5Q96PH1 765 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 RBM15Q96T37 977 aaKnown RBP eCLIP3.06□□□□□ -1.92
CD44-212ENST00000524922 KRTAP3-1Q9BYR8 98 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 BCAS3Q9H6U6 928 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 RXFP1Q9HBX9 757 aa3.06□□□□□ -1.92
CD44-212ENST00000524922 SPATA6Q9NWH7 488 aaPredicted RBP3.06□□□□□ -1.92
CD44-212ENST00000524922 CGGBP1Q9UFW8 167 aaPredicted RBP3.06□□□□□ -1.92
CD44-212ENST00000524922 SF3B6Q9Y3B4 125 aaKnown RBP3.06□□□□□ -1.92
CD44-212ENST00000524922 MRC2Q9UBG0 1479 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 RSF1Q96T23 1441 aaPredicted RBP3.05□□□□□ -1.92
CD44-212ENST00000524922 STXBP3O00186 592 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 VAMP4O75379 141 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 CAPNS1P04632 268 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 CELA3BP08861 270 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 NOP2P46087 812 aaKnown RBP3.05□□□□□ -1.92
CD44-212ENST00000524922 CASP7P55210 303 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 POU4F1Q01851 419 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 PPP2R5DQ14738 602 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 BICRALQ6AI39 1079 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 PRRT2Q7Z6L0 340 aaPredicted RBP3.05□□□□□ -1.92
CD44-212ENST00000524922 JAMLQ86YT9 394 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 LINC00482Q8N8I6 264 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 PLEKHO2Q8TD55 490 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 DPF3Q92784 378 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 RNF34Q969K3 372 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 SYT3Q9BQG1 590 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 SPATA25Q9BR10 227 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 PHAXQ9H814 394 aaKnown RBP3.05□□□□□ -1.92
CD44-212ENST00000524922 APEX2Q9UBZ4 518 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 EFR3BQ9Y2G0 817 aa3.05□□□□□ -1.92
CD44-212ENST00000524922 C7orf72A4D263 438 aa3.04□□□□□ -1.92
CD44-212ENST00000524922 TBC1D8O95759 1140 aa3.04□□□□□ -1.92
CD44-212ENST00000524922 ADRB1P08588 477 aa3.04□□□□□ -1.92
CD44-212ENST00000524922 NCAM1P13591 858 aa3.04□□□□□ -1.92
CD44-212ENST00000524922 PFKLP17858 780 aa3.04□□□□□ -1.92
CD44-212ENST00000524922 KCNC1P48547 511 aa3.04□□□□□ -1.92
CD44-212ENST00000524922 HDLBPQ00341 1268 aaKnown RBP3.04□□□□□ -1.92
CD44-212ENST00000524922 GRB10Q13322 594 aa3.04□□□□□ -1.92
CD44-212ENST00000524922 NETO2Q8NC67 525 aa3.04□□□□□ -1.92
CD44-212ENST00000524922 FGD4Q96M96 766 aa3.04□□□□□ -1.92
CD44-212ENST00000524922 SSBP3Q9BWW4 388 aaPredicted RBP3.04□□□□□ -1.92
CD44-212ENST00000524922 RWDD3Q9Y3V2 267 aa3.04□□□□□ -1.92
CD44-212ENST00000524922 PMF1-BGLAPU3KQ54 211 aa3.04□□□□□ -1.92
CD44-212ENST00000524922 BAZ1AQ9NRL2 1556 aaPredicted RBP3.04□□□□□ -1.92
CD44-212ENST00000524922 C2orf71A6NGG8 1288 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 SCAMP3O14828 347 aaKnown RBP3.03□□□□□ -1.92
CD44-212ENST00000524922 C8BP07358 591 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 EIF6P56537 245 aaKnown RBP3.03□□□□□ -1.92
CD44-212ENST00000524922 CACNB2Q08289 660 aaPredicted RBP3.03□□□□□ -1.92
CD44-212ENST00000524922 TRIM26Q12899 539 aaPredicted RBP3.03□□□□□ -1.92
CD44-212ENST00000524922 TCEAL1Q15170 157 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 INF2Q27J81 1249 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 DPY19L1Q2PZI1 675 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 GNPTABQ3T906 1256 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 PRR31Q5SQ13 230 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 FBXW10Q5XX13 1052 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 WWC2Q6AWC2 1192 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 HHIPL2Q6UWX4 724 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 ZNF761Q86XN6 746 aaPredicted RBP3.03□□□□□ -1.92
CD44-212ENST00000524922 CPNE8Q86YQ8 564 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 ZNF654Q8IZM8 581 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 CARFQ8N187 725 aa3.03□□□□□ -1.92
CD44-212ENST00000524922 Q8N1Y9 231 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms