RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 RAPGEF3O95398 923 aa8.28□□□□□ -1.08
SKP1-213ENST00000524288 IBSPP21815 317 aaPredicted RBP8.28□□□□□ -1.08
SKP1-213ENST00000524288 ZNF445P59923 1031 aa8.28□□□□□ -1.08
SKP1-213ENST00000524288 TMC3Q7Z5M5 1100 aa8.28□□□□□ -1.08
SKP1-213ENST00000524288 C1QL4Q86Z23 238 aa8.28□□□□□ -1.08
SKP1-213ENST00000524288 EBF1Q9UH73 591 aa8.28□□□□□ -1.08
SKP1-213ENST00000524288 GPR160Q9UJ42 338 aa8.28□□□□□ -1.08
SKP1-213ENST00000524288 MRPS23Q9Y3D9 190 aaKnown RBP8.28□□□□□ -1.08
SKP1-213ENST00000524288 SSU72P8A0A1W2PR75 194 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 SEMA7AO75326 666 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 RPL10P27635 214 aaKnown RBP8.27□□□□□ -1.09
SKP1-213ENST00000524288 MASP1P48740 699 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 IGBP1P78318 339 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 LCE1DQ5T752 114 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 WAPLQ7Z5K2 1190 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 MAP6Q96JE9 813 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 ZDHHC15Q96MV8 337 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 IPO9Q96P70 1041 aaKnown RBP8.27□□□□□ -1.09
SKP1-213ENST00000524288 IER2Q9BTL4 223 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 DHRS4Q9BTZ2 278 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 FOXP3Q9BZS1 431 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 PCDH12Q9NPG4 1184 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 CGGBP1Q9UFW8 167 aaPredicted RBP8.27□□□□□ -1.09
SKP1-213ENST00000524288 PRKAB1Q9Y478 270 aa8.27□□□□□ -1.09
SKP1-213ENST00000524288 ETV2O00321 342 aaPredicted RBP8.26□□□□□ -1.09
SKP1-213ENST00000524288 PRAMEF1O95521 474 aa8.26□□□□□ -1.09
SKP1-213ENST00000524288 PABPC4Q13310 644 aaKnown RBP eCLIP8.26□□□□□ -1.09
SKP1-213ENST00000524288 SF1Q15637 639 aaKnown RBP8.26□□□□□ -1.09
SKP1-213ENST00000524288 KCNA10Q16322 511 aa8.26□□□□□ -1.09
SKP1-213ENST00000524288 LONRF2Q1L5Z9 754 aa8.26□□□□□ -1.09
SKP1-213ENST00000524288 ANKRD39Q53RE8 183 aa8.26□□□□□ -1.09
SKP1-213ENST00000524288 TAF7LQ5H9L4 462 aa8.26□□□□□ -1.09
SKP1-213ENST00000524288 ATG14Q6ZNE5 492 aa8.26□□□□□ -1.09
SKP1-213ENST00000524288 FIBCD1Q8N539 461 aa8.26□□□□□ -1.09
SKP1-213ENST00000524288 KCNN1Q92952 543 aa8.26□□□□□ -1.09
SKP1-213ENST00000524288 KISS1RQ969F8 398 aaPredicted RBP8.26□□□□□ -1.09
SKP1-213ENST00000524288 SHISA4Q96DD7 197 aa8.26□□□□□ -1.09
SKP1-213ENST00000524288 MRGPRX3Q96LB0 322 aa8.26□□□□□ -1.09
SKP1-213ENST00000524288 NCOA5Q9HCD5 579 aaKnown RBP8.26□□□□□ -1.09
SKP1-213ENST00000524288 TMEM82A0PJX8 343 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 BLACEA4D250 179 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 NRDCO43847 1150 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 PSPNO60542 156 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 VAMP4O75379 141 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 PABPC1P11940 636 aaKnown RBP8.25□□□□□ -1.09
SKP1-213ENST00000524288 ANAPC15P60006 121 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 NSMFQ6X4W1 530 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 NLRX1Q86UT6 975 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 TRIM59Q8IWR1 403 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 ZCRB1Q8TBF4 217 aaKnown RBP8.25□□□□□ -1.09
SKP1-213ENST00000524288 CLUHP3Q96NS8 147 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 DSCC1Q9BVC3 393 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 ZNF552Q9H707 407 aaPredicted RBP8.25□□□□□ -1.09
SKP1-213ENST00000524288 CRTAC1Q9NQ79 661 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 CHST7Q9NS84 486 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 EMC9Q9Y3B6 208 aa8.25□□□□□ -1.09
SKP1-213ENST00000524288 NPIPB6E9PJ23 425 aa8.24□□□□□ -1.09
SKP1-213ENST00000524288 HRKO00198 91 aa8.24□□□□□ -1.09
SKP1-213ENST00000524288 SYPP08247 313 aa8.24□□□□□ -1.09
SKP1-213ENST00000524288 DPY19L1Q2PZI1 675 aa8.24□□□□□ -1.09
SKP1-213ENST00000524288 AMIGO3Q86WK7 504 aa8.24□□□□□ -1.09
SKP1-213ENST00000524288 NIM1KQ8IY84 436 aa8.24□□□□□ -1.09
SKP1-213ENST00000524288 OSBP2Q969R2 916 aa8.24□□□□□ -1.09
SKP1-213ENST00000524288 FCRL2Q96LA5 508 aaPredicted RBP8.24□□□□□ -1.09
SKP1-213ENST00000524288 KCNK12Q9HB15 430 aa8.24□□□□□ -1.09
SKP1-213ENST00000524288 GPR55Q9Y2T6 319 aaPredicted RBP8.24□□□□□ -1.09
SKP1-213ENST00000524288 NOP58Q9Y2X3 529 aaKnown RBP8.24□□□□□ -1.09
SKP1-213ENST00000524288 NOTOA8MTQ0 251 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 H0Y8X5 98 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 USP2O75604 605 aaPredicted RBP8.23□□□□□ -1.09
SKP1-213ENST00000524288 MYCLP1P12525 358 aaPredicted RBP8.23□□□□□ -1.09
SKP1-213ENST00000524288 PDE6BP35913 854 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 KCNJ6P48051 423 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 AMPD3Q01432 767 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 SLC14A2Q15849 920 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 PRSS53Q2L4Q9 553 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 ZC3H12BQ5HYM0 836 aaKnown RBP8.23□□□□□ -1.09
SKP1-213ENST00000524288 GTF2IRD2BQ6EKJ0 949 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 ZNF605Q86T29 641 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 GTF2IRD2Q86UP8 949 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 SYNPOQ8N3V7 929 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 ARHGEF39Q8N4T4 335 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 NINJ1Q92982 152 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 MCOLN1Q9GZU1 580 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 TNFRSF10DQ9UBN6 386 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 SMG5Q9UPR3 1016 aaKnown RBP8.23□□□□□ -1.09
SKP1-213ENST00000524288 PLAAQ9Y263 795 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 FHOD1Q9Y613 1164 aa8.23□□□□□ -1.09
SKP1-213ENST00000524288 TEX51A0A1B0GUA7 166 aa8.22□□□□□ -1.09
SKP1-213ENST00000524288 OR14I1A6ND48 311 aa8.22□□□□□ -1.09
SKP1-213ENST00000524288 ZSCAN22P10073 491 aaPredicted RBP8.22□□□□□ -1.09
SKP1-213ENST00000524288 FGFR1P11362 822 aa8.22□□□□□ -1.09
SKP1-213ENST00000524288 CNGA1P29973 690 aa8.22□□□□□ -1.09
SKP1-213ENST00000524288 BMP8BP34820 402 aa8.22□□□□□ -1.09
SKP1-213ENST00000524288 CIAPIN1Q6FI81 312 aa8.22□□□□□ -1.09
SKP1-213ENST00000524288 CEP128Q6ZU80 1094 aa8.22□□□□□ -1.09
SKP1-213ENST00000524288 SCUBE1Q8IWY4 988 aa8.22□□□□□ -1.09
SKP1-213ENST00000524288 MFSD3Q96ES6 412 aa8.22□□□□□ -1.09
SKP1-213ENST00000524288 RCC1LQ96I51 464 aaKnown RBP8.22□□□□□ -1.09
SKP1-213ENST00000524288 HHIPL1Q96JK4 782 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms