RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 BLACEA4D250 179 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 NFIBO00712 420 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 MARCH6O60337 910 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 CNGA1P29973 690 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 MAP4K2Q12851 820 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 PPP2R5DQ14738 602 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 SLC35F1Q5T1Q4 408 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 LRRTM3Q86VH5 581 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 UBR7Q8N806 425 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 PRPF38AQ8NAV1 312 aaKnown RBP4.84□□□□□ -1.63
CSMD1-214ENST00000524177 DTWD2Q8NBA8 298 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 TMEM145Q8NBT3 493 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 ZDHHC15Q96MV8 337 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 DIRC2Q96SL1 478 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 METTL14Q9HCE5 456 aaKnown RBP4.84□□□□□ -1.63
CSMD1-214ENST00000524177 INTS7Q9NVH2 962 aaKnown RBP4.84□□□□□ -1.63
CSMD1-214ENST00000524177 MAGEC2Q9UBF1 373 aaPredicted RBP4.84□□□□□ -1.63
CSMD1-214ENST00000524177 GTF2IRD1Q9UHL9 959 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 MINPP1Q9UNW1 487 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 MAPRE3Q9UPY8 281 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 ATP8A1Q9Y2Q0 1164 aa4.84□□□□□ -1.63
CSMD1-214ENST00000524177 PITPNM2Q9BZ72 1349 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 SHISA3A0PJX4 238 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 H0Y8X5 98 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 IGF2BP3O00425 579 aaKnown RBP eCLIP4.83□□□□□ -1.64
CSMD1-214ENST00000524177 SIGLEC6O43699 453 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 PRAMEF1O95521 474 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 SCG5P05408 212 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 PDGFRBP09619 1106 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 SOX5P35711 763 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 CTSKP43235 329 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 EVA1CP58658 441 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 PRSS53Q2L4Q9 553 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 FGD2Q7Z6J4 655 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 DDX42Q86XP3 938 aaKnown RBP eCLIP4.83□□□□□ -1.64
CSMD1-214ENST00000524177 AFAP1L2Q8N4X5 818 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 FBXO15Q8NCQ5 510 aaPredicted RBP4.83□□□□□ -1.64
CSMD1-214ENST00000524177 KCTD13Q8WZ19 329 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 SCLYQ96I15 445 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 MCMBPQ9BTE3 642 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 NSUN3Q9H649 340 aaKnown RBP4.83□□□□□ -1.64
CSMD1-214ENST00000524177 CARS2Q9HA77 564 aaKnown RBP4.83□□□□□ -1.64
CSMD1-214ENST00000524177 NDOR1Q9UHB4 597 aa4.83□□□□□ -1.64
CSMD1-214ENST00000524177 TPX2Q9ULW0 747 aaKnown RBP4.83□□□□□ -1.64
CSMD1-214ENST00000524177 GPR55Q9Y2T6 319 aaPredicted RBP4.83□□□□□ -1.64
CSMD1-214ENST00000524177 ASXL2Q76L83 1435 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.82□□□□□ -1.64
CSMD1-214ENST00000524177 PRR33A8MZF0 331 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 NPIPB6E9PJ23 425 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 PARNO95453 639 aaKnown RBP4.82□□□□□ -1.64
CSMD1-214ENST00000524177 SNRPB2P08579 225 aaKnown RBP4.82□□□□□ -1.64
CSMD1-214ENST00000524177 INHBBP09529 407 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 GABREP78334 506 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 ZNF460Q14592 562 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 NOL9Q5SY16 702 aaKnown RBP4.82□□□□□ -1.64
CSMD1-214ENST00000524177 SFRP5Q5T4F7 317 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 DENND5AQ6IQ26 1287 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 CNNM4Q6P4Q7 775 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 C22orf34Q6ZV56 151 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 KREMEN2Q8NCW0 462 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 COX4I2Q96KJ9 171 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 DSCC1Q9BVC3 393 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 KCNK12Q9HB15 430 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 PRDM5Q9NQX1 630 aaPredicted RBP4.82□□□□□ -1.64
CSMD1-214ENST00000524177 HOMER2Q9NSB8 354 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 C19orf73Q9NVV2 129 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 RAPGEFL1Q9UHV5 662 aa4.82□□□□□ -1.64
CSMD1-214ENST00000524177 DIS3Q9Y2L1 958 aaKnown RBP4.82□□□□□ -1.64
CSMD1-214ENST00000524177 GNAT3A8MTJ3 354 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 MEIS1O00470 390 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 VAMP4O75379 141 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 S100BP04271 92 aaPredicted RBP4.81□□□□□ -1.64
CSMD1-214ENST00000524177 POU3F2P20265 443 aaPredicted RBP4.81□□□□□ -1.64
CSMD1-214ENST00000524177 CYP7A1P22680 504 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 HOXC12P31275 282 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 KIR3DL1P43629 444 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 CLCN7P51798 805 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 AMPD2Q01433 879 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 NMIQ13287 307 aaPredicted RBP4.81□□□□□ -1.64
CSMD1-214ENST00000524177 DPY19L1Q2PZI1 675 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 PKN3Q6P5Z2 889 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 CRTC3Q6UUV7 619 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 MAMDC2Q7Z304 686 aaPredicted RBP4.81□□□□□ -1.64
CSMD1-214ENST00000524177 STRA8Q7Z7C7 330 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 DDX1Q92499 740 aaKnown RBP4.81□□□□□ -1.64
CSMD1-214ENST00000524177 PTPRN2Q92932 1015 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 HDAC8Q9BY41 377 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 CYP26B1Q9NR63 512 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 CHST7Q9NS84 486 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 SF3B6Q9Y3B4 125 aaKnown RBP4.81□□□□□ -1.64
CSMD1-214ENST00000524177 TNPO3Q9Y5L0 923 aaKnown RBP4.81□□□□□ -1.64
CSMD1-214ENST00000524177 CAPN6Q9Y6Q1 641 aa4.81□□□□□ -1.64
CSMD1-214ENST00000524177 STXBP3O00186 592 aa4.8□□□□□ -1.64
CSMD1-214ENST00000524177 EFCAB14O75071 495 aa4.8□□□□□ -1.64
CSMD1-214ENST00000524177 RASGRP1O95267 797 aa4.8□□□□□ -1.64
CSMD1-214ENST00000524177 EYA4O95677 639 aa4.8□□□□□ -1.64
CSMD1-214ENST00000524177 CBX7O95931 251 aa4.8□□□□□ -1.64
CSMD1-214ENST00000524177 THBDP07204 575 aa4.8□□□□□ -1.64
CSMD1-214ENST00000524177 ECI1P42126 302 aa4.8□□□□□ -1.64
CSMD1-214ENST00000524177 KCNJ6P48051 423 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms