RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 MAP7Q14244 749 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 ZNF460Q14592 562 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 PPP2R5DQ14738 602 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 NFKBIBQ15653 356 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 GAB4Q2WGN9 574 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 KCNT2Q6UVM3 1135 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 ZAR1Q86SH2 424 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 LRRTM3Q86VH5 581 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 TMEM52Q8NDY8 209 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 UTP4Q969X6 686 aaKnown RBP3.83□□□□□ -1.8
LINC01339-204ENST00000524094 SLC12A9Q9BXP2 914 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 GPR62Q9BZJ7 368 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 IRF2BPLQ9H1B7 796 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 NOL6Q9H6R4 1146 aaKnown RBP3.83□□□□□ -1.8
LINC01339-204ENST00000524094 GPRC5CQ9NQ84 441 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 SEMA3GQ9NS98 782 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 ATP8A1Q9Y2Q0 1164 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 TRAF6Q9Y4K3 522 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 PCDHB12Q9Y5F1 795 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 WASHC2CQ9Y4E1 1318 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 NCAPD3P42695 1498 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 ATAD2BQ9ULI0 1458 aa3.83□□□□□ -1.8
LINC01339-204ENST00000524094 hCG_2014768A0A024R1R8 64 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 TCRBV16S1A1N1A0A5B0 115 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 AURKAO14965 403 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 SART1O43290 800 aaKnown RBP3.82□□□□□ -1.8
LINC01339-204ENST00000524094 PDE8AO60658 829 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 PPP1R11O60927 126 aaPredicted RBP3.82□□□□□ -1.8
LINC01339-204ENST00000524094 CKMP06732 381 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 ITGA4P13612 1032 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 LCP1P13796 627 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 CDK11BP21127 795 aaKnown RBP3.82□□□□□ -1.8
LINC01339-204ENST00000524094 ETV3P41162 512 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 SUMO1P63165 101 aaKnown RBP3.82□□□□□ -1.8
LINC01339-204ENST00000524094 RNF4P78317 190 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 MBLAC2Q68D91 279 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 ZNF765Q7L2R6 523 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 BRAPQ7Z569 592 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 PRRT2Q7Z6L0 340 aaPredicted RBP3.82□□□□□ -1.8
LINC01339-204ENST00000524094 TRIM8Q9BZR9 551 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 TMX1Q9H3N1 280 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 CAAP1Q9H8G2 361 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 CHST7Q9NS84 486 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 INTS7Q9NVH2 962 aaKnown RBP3.82□□□□□ -1.8
LINC01339-204ENST00000524094 KLHL42Q9P2K6 505 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 FBXL21Q9UKT6 434 aa3.82□□□□□ -1.8
LINC01339-204ENST00000524094 GPR55Q9Y2T6 319 aaPredicted RBP3.82□□□□□ -1.8
LINC01339-204ENST00000524094 TNPO3Q9Y5L0 923 aaKnown RBP3.82□□□□□ -1.8
LINC01339-204ENST00000524094 CUX2O14529 1486 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 TMEM82A0PJX8 343 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 GAS2O43903 313 aaKnown RBP3.81□□□□□ -1.8
LINC01339-204ENST00000524094 RASGRP1O95267 797 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 CBX7O95931 251 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 THBDP07204 575 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 PDGFRBP09619 1106 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 IFNGR1P15260 489 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 FOSL1P15407 271 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 VAV1P15498 845 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 SYN1P17600 705 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 NMIQ13287 307 aaPredicted RBP3.81□□□□□ -1.8
LINC01339-204ENST00000524094 DPY19L1Q2PZI1 675 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 BRDTQ58F21 947 aaPredicted RBP3.81□□□□□ -1.8
LINC01339-204ENST00000524094 SFRP5Q5T4F7 317 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 STYK1Q6J9G0 422 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 SPACA3Q8IXA5 215 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 DAGLBQ8NCG7 672 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 ENOX1Q8TC92 643 aaKnown RBP3.81□□□□□ -1.8
LINC01339-204ENST00000524094 PTPRN2Q92932 1015 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 TCTN2Q96GX1 697 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 CCDC140Q96MF4 163 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 PPP1R16BQ96T49 567 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 CDC6Q99741 560 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 ORAI3Q9BRQ5 295 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 GBP3Q9H0R5 595 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 LRP2BPQ9P2M1 347 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 EBF1Q9UH73 591 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 MAPRE3Q9UPY8 281 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 PCDHA9Q9Y5H5 950 aa3.81□□□□□ -1.8
LINC01339-204ENST00000524094 LAMC3Q9Y6N6 1575 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 LRRC10BA6NIK2 292 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 AGRPO00253 132 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 TRAF5O00463 557 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 NOP56O00567 594 aaKnown RBP3.8□□□□□ -1.8
LINC01339-204ENST00000524094 ZNF205O95201 554 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 CRTAMO95727 393 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 NAT2P11245 290 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 KIR3DL1P43629 444 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 MECP2P51608 486 aaKnown RBP3.8□□□□□ -1.8
LINC01339-204ENST00000524094 GABREP78334 506 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 SCRN1Q12765 414 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 INF2Q27J81 1249 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 CRTC3Q6UUV7 619 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 ZPBP2Q6X784 338 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 ATG4DQ86TL0 474 aaPredicted RBP3.8□□□□□ -1.8
LINC01339-204ENST00000524094 WFDC3Q8IUB2 231 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 ZCRB1Q8TBF4 217 aaKnown RBP3.8□□□□□ -1.8
LINC01339-204ENST00000524094 PIWIL2Q8TC59 973 aaKnown RBP3.8□□□□□ -1.8
LINC01339-204ENST00000524094 DPF3Q92784 378 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 MFSD14AQ96MC6 490 aa3.8□□□□□ -1.8
LINC01339-204ENST00000524094 ZDHHC15Q96MV8 337 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms