RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 GOLPH3LQ9H4A5 285 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 SAMSN1Q9NSI8 373 aaKnown RBP14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 KIF28PB7ZC32 967 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 hCG_1984214I3L0E3 225 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 K7ENM7 598 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 AKR1B1P15121 316 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 KLRK1P26718 216 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 ADAM9Q13443 819 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 TMED8Q6PL24 325 aaPredicted RBP14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 KRT26Q7Z3Y9 468 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 ZNF713Q8N859 430 aaPredicted RBP14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 ZNF341Q9BYN7 854 aa14.47□□□□□ -0.09
PCDHGB1-201ENST00000523390 ATP1A3P13637 1013 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 LMAN1P49257 510 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 SMC1AQ14683 1233 aaKnown RBP14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 OTUD6AQ7L8S5 288 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 STAG2Q8N3U4 1231 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 ZNF512BQ96KM6 892 aaPredicted RBP14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 ZNF577Q9BSK1 485 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 CUEDC2Q9H467 287 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 REREQ9P2R6 1566 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 ORC4O43929 436 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 HSF2BPO75031 334 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 GTF2F1P35269 517 aaKnown RBP eCLIP14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 ANTXR2P58335 489 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 CACTINQ8WUQ7 758 aaKnown RBP14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 CRAMP1Q96RY5 1269 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 ANO3Q9BYT9 981 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 SENP2Q9HC62 589 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 IKBKBO14920 756 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 SPOPO43791 374 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 TRPC3Q13507 836 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 ODR4Q5SWX8 454 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 FMNL3Q8IVF7 1028 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 CNOT6LQ96LI5 555 aaKnown RBP14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 DAGLAQ9Y4D2 1042 aa14.46□□□□□ -0.09
PCDHGB1-201ENST00000523390 USP17L15C9J2P7 530 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 USP17L13C9JLJ4 530 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 USP17L11C9JVI0 530 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 USP17L18D6R9N7 530 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 USP17L22D6RA61 530 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 USP17L17D6RBQ6 530 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 USP17L19D6RCP7 530 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 USP17L20D6RJB6 530 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 USP17L24Q0WX57 530 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 USP17L6PQ6QN14 398 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 PAGE5Q96GU1 130 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 TUBGCP2Q9BSJ2 902 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 MXD3Q9BW11 206 aa14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 IFIH1Q9BYX4 1025 aaKnown RBP14.46□□□□□ -0.1
PCDHGB1-201ENST00000523390 SIGLEC1Q9BZZ2 1709 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 USP17L10C9JJH3 530 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 NEDD1Q8NHV4 660 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 MAGEF1Q9HAY2 307 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 ADGRB2O60241 1585 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 SHTN1A0MZ66 631 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 ASNSP08243 561 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 ELF2Q15723 593 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 FBXO33Q7Z6M2 555 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 CLEC10AQ8IUN9 316 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 DEPTORQ8TB45 409 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 IGDCC4Q8TDY8 1250 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 NOX5Q96PH1 765 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 SUGCTQ9HAC7 445 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 COL5A2P05997 1499 aaPredicted RBP14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 TNNI1P19237 187 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 NT5C2P49902 561 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 SUPT20HL1Q3ZLR7 823 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 CCDC127Q96BQ5 260 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 FAM107BQ9H098 131 aa14.45□□□□□ -0.1
PCDHGB1-201ENST00000523390 GNA14O95837 355 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 MYZAPP0CAP1 466 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 CASP14P31944 242 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 GRM4Q14833 912 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 RESP18Q5W5W9 173 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 KIFAP3Q92845 792 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 CCDC51Q96ER9 411 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 RCAN1P53805 252 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 PDLIM2Q96JY6 352 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 VAV2P52735 878 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 BRDTQ58F21 947 aaPredicted RBP14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 ARL6IP4Q66PJ3 421 aaKnown RBP14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 P2RX5Q93086 422 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 CTTNBP2NLQ9P2B4 639 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 SALL3Q9BXA9 1300 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 EIF2AK2P19525 551 aaKnown RBP14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 TNNC1P63316 161 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 FAM83BQ5T0W9 1011 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 SRBD1Q8N5C6 995 aaKnown RBP14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 RASAL2Q9UJF2 1139 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 PPP2R2CQ9Y2T4 447 aa14.44□□□□□ -0.1
PCDHGB1-201ENST00000523390 ZBTB5O15062 677 aa14.43□□□□□ -0.1
PCDHGB1-201ENST00000523390 POLR2FP61218 127 aaKnown RBP14.43□□□□□ -0.1
PCDHGB1-201ENST00000523390 GSTA5Q7RTV2 222 aa14.43□□□□□ -0.1
PCDHGB1-201ENST00000523390 FMR1NBQ8N0W7 255 aaPredicted RBP14.43□□□□□ -0.1
PCDHGB1-201ENST00000523390 METTL13Q8N6R0 699 aa14.43□□□□□ -0.1
PCDHGB1-201ENST00000523390 TMEM260Q9NX78 707 aa14.43□□□□□ -0.1
PCDHGB1-201ENST00000523390 STK17AQ9UEE5 414 aa14.43□□□□□ -0.1
PCDHGB1-201ENST00000523390 F5H6K3 240 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms