RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 DDX3YO15523 660 aaKnown RBP8.61□□□□□ -1.03
SDCBP-210ENST00000522843 BMP3P12645 472 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 C16orf46Q6P387 395 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-210ENST00000522843 DEFB123Q8N688 67 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 KLHDC7BQ96G42 594 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 MKNK1Q9BUB5 465 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 PBX4Q9BYU1 374 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 KCNF1Q9H3M0 494 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 ZFYVE28Q9HCC9 887 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 SH2B1Q9NRF2 756 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-210ENST00000522843 MTMR10Q9NXD2 777 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 CXXC1Q9P0U4 656 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-210ENST00000522843 MINPP1Q9UNW1 487 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 STXBP5LQ9Y2K9 1186 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 PPP2R3BQ9Y5P8 575 aa8.61□□□□□ -1.03
SDCBP-210ENST00000522843 SPEF2Q9C093 1822 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 CCL15-CCL14A0A0B4J2E2 113 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 CLRN2A0PK11 232 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 ADAM11O75078 769 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 KIF4AO95239 1232 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 GJB1P08034 283 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 EPHA1P21709 976 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 MMP14P50281 582 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 CCT4P50991 539 aaKnown RBP8.6□□□□□ -1.03
SDCBP-210ENST00000522843 CCL15Q16663 113 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 FAM26DQ5JW98 314 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 ANKRD34AQ69YU3 496 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 TTLL5Q6EMB2 1281 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 ANKRD18AQ8IVF6 992 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 ANKRD13AQ8IZ07 590 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 UBASH3BQ8TF42 649 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 PRMT6Q96LA8 375 aaPredicted RBP8.6□□□□□ -1.03
SDCBP-210ENST00000522843 HTATIP2Q9BUP3 242 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 COA1Q9GZY4 146 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 NR2E3Q9Y5X4 410 aa8.6□□□□□ -1.03
SDCBP-210ENST00000522843 IRS2Q9Y4H2 1338 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 TTC28Q96AY4 2481 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 TLR2O60603 784 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 CCL5P13501 91 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 PTPRAP18433 802 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 RASA3Q14644 834 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 NAA30Q147X3 362 aaPredicted RBP8.59□□□□□ -1.03
SDCBP-210ENST00000522843 ARHGEF6Q15052 776 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 DLGAP5Q15398 846 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 SUPT20HL1Q3ZLR7 823 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 CCDC152Q4G0S7 254 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.59□□□□□ -1.03
SDCBP-210ENST00000522843 TEPSINQ96N21 525 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 GDF15Q99988 308 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 KRTAP4-7Q9BYR0 210 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 ADAM19Q9H013 955 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 BABAM1Q9NWV8 329 aa8.59□□□□□ -1.03
SDCBP-210ENST00000522843 PRUNE2Q8WUY3 3088 aa8.58□□□□□ -1.04
SDCBP-210ENST00000522843 WDR64B1ANS9 1081 aa8.58□□□□□ -1.04
SDCBP-210ENST00000522843 BTBD19C9JJ37 291 aa8.58□□□□□ -1.04
SDCBP-210ENST00000522843 PDE8AO60658 829 aa8.58□□□□□ -1.04
SDCBP-210ENST00000522843 FARP2O94887 1054 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-210ENST00000522843 PCCAP05165 728 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-210ENST00000522843 VGLL4Q14135 290 aa8.58□□□□□ -1.04
SDCBP-210ENST00000522843 CFAP100Q494V2 611 aa8.58□□□□□ -1.04
SDCBP-210ENST00000522843 C17orf99Q6UX52 265 aa8.58□□□□□ -1.04
SDCBP-210ENST00000522843 CEP120Q8N960 986 aa8.58□□□□□ -1.04
SDCBP-210ENST00000522843 U2AF1L4Q8WU68 220 aaKnown RBP8.58□□□□□ -1.04
SDCBP-210ENST00000522843 BSDC1Q9NW68 430 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-210ENST00000522843 SRRDQ9UH36 339 aa8.58□□□□□ -1.04
SDCBP-210ENST00000522843 HIF3AQ9Y2N7 669 aa8.58□□□□□ -1.04
SDCBP-210ENST00000522843 CDH23Q9H251 3354 aa8.58□□□□□ -1.04
SDCBP-210ENST00000522843 ADGRA2Q96PE1 1338 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 GRK4P32298 578 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 BMP8BP34820 402 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 PREPP48147 710 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 GTF2A2P52657 109 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 PRMT2P55345 433 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 NCAPG2Q86XI2 1143 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 CCDC82Q8N4S0 544 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.57□□□□□ -1.04
SDCBP-210ENST00000522843 CLP1Q92989 425 aaKnown RBP8.57□□□□□ -1.04
SDCBP-210ENST00000522843 WNT8BQ93098 351 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 COL26A1Q96A83 441 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 POP1Q99575 1024 aaKnown RBP8.57□□□□□ -1.04
SDCBP-210ENST00000522843 RNF208Q9H0X6 261 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 GREM2Q9H772 168 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 C1orf115Q9H7X2 142 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 VEZTQ9HBM0 779 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 ABI2Q9NYB9 513 aaPredicted RBP8.57□□□□□ -1.04
SDCBP-210ENST00000522843 RIPOR2Q9Y4F9 1068 aa8.57□□□□□ -1.04
SDCBP-210ENST00000522843 LAMA2P24043 3122 aaKnown RBP8.57□□□□□ -1.04
SDCBP-210ENST00000522843 F8W031 263 aaPredicted RBP8.56□□□□□ -1.04
SDCBP-210ENST00000522843 SNAP23O00161 211 aa8.56□□□□□ -1.04
SDCBP-210ENST00000522843 CHL1O00533 1208 aa8.56□□□□□ -1.04
SDCBP-210ENST00000522843 SGPL1O95470 568 aa8.56□□□□□ -1.04
SDCBP-210ENST00000522843 PSMC4P43686 418 aa8.56□□□□□ -1.04
SDCBP-210ENST00000522843 RIPK4P57078 832 aa8.56□□□□□ -1.04
SDCBP-210ENST00000522843 LRIT3Q3SXY7 679 aa8.56□□□□□ -1.04
SDCBP-210ENST00000522843 TTLL11Q8NHH1 800 aa8.56□□□□□ -1.04
SDCBP-210ENST00000522843 MYD88Q99836 296 aa8.56□□□□□ -1.04
SDCBP-210ENST00000522843 PHAXQ9H814 394 aaKnown RBP8.56□□□□□ -1.04
SDCBP-210ENST00000522843 CD209Q9NNX6 404 aa8.56□□□□□ -1.04
SDCBP-210ENST00000522843 OSGEPQ9NPF4 335 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms